FFCP PHASE1:Hg19::chr3:52720191..52720196,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26354 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29931 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000460073_5end | |||
|description=CAGE_peak_4_at_GNL3_5end | |||
|id=chr3:52720191..52720196,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.27e-11;3!CL:0000182;4.80e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.97e-12,3;CL:0000182,4.16e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.03e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.42e-09;31!UBERON:0002330;2.42e-09;31!UBERON:0001829;1.04e-08;2!UBERON:0002119;1.53e-08;4!UBERON:0002107;3.90e-08;19!UBERON:0006925;3.90e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.53e-09,31;UBERON:0002330,1.53e-09,31;UBERON:0001829,1.07e-08,2;UBERON:0002119,1.84e-08,4;UBERON:0002107,3.45e-08,19;UBERON:0006925,3.45e-08,19;UBERON:0008836,3.45e-08,19;UBERON:0008835,6.16e-07,22;UBERON:0003894,6.16e-07,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.845726424575827,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.246301768349837,0.236132343941038,0.393364276848904,0.767658796194425,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0.727752183563449,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,2.64342657158052,0,0.263384084775077,0.983548850569165,0.393010762749165,1.02800749499755,0,0,0,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,0.493313713811028,0.276350017785848,0,0,0,0,0.339928028092699,0.766440987203842,0,0,0,0,0,0,0,0,0.236777252044017,0,1.00803371612366,1.06976078313403,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0.0654895377488563,0,0,0.649094787309367,0,0,1.90792499444274,2.28797964312051,4.45749001595478,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0.506522046658319,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.412210116953756,0.257640540045629,0,0.337552664482532,0.292311015483596,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0.57978255948989,0.545492241181669,0.860413786167011,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0.721879481669586,0.591534000199219,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,3.80265104465493,0,1.77236972004421,0.441463099414651,0.122988438543114,0.514703430895577,0.109750285408626,0,1.00528972411631,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,1.84780341018745,0.567100388969546,0.268675568108545,0,0.383382679165211,11.8239177095026,0.44024217006613,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0,0.1466765716419,0.904902010304444,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.904318131178758,0,0.699810938274399,0,0,0,0,0,1.42636905040718,0,0,0,0,0.788123040807709,0.215627574859517,0.898401253958239,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0.303127571446259,0,0,0.496215615637554,0,0.561320188866147,0.384417447767103,1.02341449813341,0.482561763430822,0,0.462629081407967,0.355123450626254,0.492762936082855,1.03850885836724,0.813472649219715,0.362578348774867,0.200506470303285,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0,0.340906509664404,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0,0,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0,0,0.272999822815972,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0.286822704408103,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0.371606350251437,0.865615277858669,0.0711418433484141,0.318852545457645,0,0.191505370132367,1.69338866179106,0,0.280797178113459,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0.270455678475983,0,0,0.561421621224659,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0.552567831062295,0.251932747854276,0,0.615424027305347,0,0.449341755736634,0.358042349351218,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0.520855522170466,1.13697999995054,0,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0.241192877250816,0,0,0,0.658156191461918,0,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.183195186803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| |||
|short_description=p4@GNL3 | |||
}} |
Revision as of 19:13, 21 January 2014
Short description: | p4@GNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460073_5end |
EntrezGene: | GNL3 |
HGNC: | 29931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.97e-12 | 3 |
hepatocyte | 4.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.53e-09 | 31 |
exocrine system | 1.53e-09 | 31 |
major salivary gland | 1.07e-08 | 2 |
left ovary | 1.84e-08 | 4 |
liver | 3.45e-08 | 19 |
digestive gland | 3.45e-08 | 19 |
liver bud | 3.45e-08 | 19 |
hepatic diverticulum | 6.16e-07 | 22 |
liver primordium | 6.16e-07 | 22 |