FFCP PHASE1:Hg19::chr3:98536722..98536741,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24627 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-50bp_to_ENST00000479144_5end | |||
|coexpression_cluster_id=C504 | |||
|description=CAGE_peak_19_at_DCBLD2_5end | |||
|id=chr3:98536722..98536741,- | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-13!180;CL:0000220!6.74e-13!246;CL:0002321!7.31e-13!248;CL:0000548!4.09e-12!679;CL:0000004!4.09e-12!679;CL:0000255!4.09e-12!679;CL:0000012!1.14e-11!682;CL:0000066!1.08e-08!254;CL:0000003!7.81e-08!722;CL:0000144!3.07e-07!625;CL:0000680!3.54e-07!57;CL:0000056!3.54e-07!57;CL:0000355!3.54e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.52e-09;5!CL:0000064;1.54e-09;3!CL:0000067;1.54e-09;3!CL:0005012;1.54e-09;3!CL:0002304;1.54e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.45e-09,3;CL:0000067,1.45e-09,3;CL:0005012,1.45e-09,3;CL:0002304,1.45e-09,3;CL:0002595,1.90e-09,5;CL:0002539,9.26e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!1.08e-09!29;DOID:120!2.22e-09!27;DOID:2394!2.97e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.37e-21;14!DOID:120;5.13e-16;27!DOID:193;1.14e-14;29!DOID:0060072;6.39e-12;4!DOID:0060084;8.29e-10;3!DOID:127;8.29e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.49e-21,14;DOID:120,4.91e-16,27;DOID:193,1.09e-14,29;DOID:0060072,4.99e-12,4;DOID:0060084,7.81e-10,3;DOID:127,7.81e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0005156!2.06e-09!59;UBERON:0000990!2.06e-09!59;UBERON:0005256!9.96e-09!143;UBERON:0000486!6.96e-08!82;UBERON:0001637!4.11e-07!42;UBERON:0003509!4.11e-07!42;UBERON:0004572!4.11e-07!42;UBERON:0003100!7.84e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.18e-12;13!UBERON:0000488;1.17e-11;4!UBERON:0007625;1.98e-11;11!UBERON:0003134;6.98e-10;33!UBERON:0003834;1.52e-09;5!UBERON:0001533;1.52e-09;5!UBERON:0001778;1.54e-09;3!UBERON:0001775;1.54e-09;3!UBERON:0000991;8.77e-09;21!UBERON:0002118;8.98e-09;5!UBERON:0002203;9.46e-08;6!UBERON:0001768;9.46e-08;6!UBERON:0002200;9.46e-08;6!UBERON:0000474;2.69e-07;37!UBERON:0004573;3.02e-07;33!UBERON:0004571;3.02e-07;33!UBERON:0003133;3.16e-07;44!UBERON:0002119;7.19e-07;4!UBERON:0003513;8.67e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.63e-12,13;UBERON:0000488,6.39e-12,4;UBERON:0007625,1.68e-11,11;UBERON:0003134,1.22e-09,37;UBERON:0000474,1.22e-09,37;UBERON:0001778,1.45e-09,3;UBERON:0001775,1.45e-09,3;UBERON:0003834,1.90e-09,5;UBERON:0001533,1.90e-09,5;UBERON:0000991,5.17e-09,21;UBERON:0009196,5.17e-09,21;UBERON:0009117,5.17e-09,21;UBERON:0005564,5.17e-09,21;UBERON:0005156,5.84e-09,59;UBERON:0000990,5.84e-09,59;UBERON:0002118,6.37e-09,5;UBERON:0004176,1.60e-08,22;UBERON:0003100,2.09e-08,41;UBERON:0003133,6.40e-08,48;UBERON:0002203,6.42e-08,6;UBERON:0001768,6.42e-08,6;UBERON:0002200,6.42e-08,6;UBERON:0004573,8.55e-08,33;UBERON:0004571,8.55e-08,33;UBERON:0002119,4.75e-07,4;UBERON:0004237,9.26e-07,10;UBERON:0004695,9.26e-07,10;UBERON:0002111,9.26e-07,10;UBERON:0004178,9.26e-07,10;UBERON:0001801,9.37e-07,14 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,2.61701557230111,0,0.631719873426831,0,0,0.697801167972428,0.218441372130172,0,0.247532705920093,0.331397375727916,6.05092631806598,0.602694528023977,2.92124036154949,1.46379839637152,0,0.408001382488506,0,0.572471974262113,1.36874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.973269740605272,2.74150969775797,3.32594096193846,3.07421749925941,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.775250277507987,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.633152558322899,0.662045904066094,1.72101972449288,1.41867352879343,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,1.34503812496621,0.117434498643765,0.161872944368132,0,0.204154171254893,0.859840221182376,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0.30648779579902,0,0.113432183160021,0.717558542755448,0.213557388818567,0.635795703478686,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0,0,0.710019185033229,0.403008392910561,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,1.88724591328378,0.878002283269004,0,0.904760751704678,0.555530670951178,0,0,4.3299402607582,1.62302566965108,0.234817388471643,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0.425325291727159,0.716468181622786,0.290633938513962,0.383382679165211,0.985326475791887,0.264145302039678,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0,0,2.1100756394171,0,2.19940580600526,0,0,0,0.239624855491583,0,0,1.44781306667579,2.67119219315498,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0,0.813795071099207,0,0.713715955188647,0.157702415033935,0.468565659970853,0,0,0,0,0.737476674166813,0.60818530127658,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0.482561763430822,0,1.69630663182921,1.42049380250502,0.739144404124282,2.59627214591811,1.16210378459959,0.120859449591622,2.00506470303285,0.644566922551274,0.459257792658427,1.27463817604702,1.04899531967539,0.902399225814824,1.84836809050595,0,0,2.00548094896464,0,0,1.72732732881711,0,0,0,0.764628819135115,0.831076008928724,0.671624264166535,0,0,1.02580050046556,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,1.07834031980251,0.15350367472613,0.137836572484531,0,0.290033387828457,0.93749290157711,0.178064071293475,1.15699440752685,0.960950336825531,0,0.2023155617111,1.39453664789186,3.1481234683064,0.6970372701606,0.308033580176089,0,0,0,0.429374660225974,0,0.316379424718726,0.762520775695299,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0.842516912477962,0,2.43713489631284,2.11300293513511,0.272999822815972,0.282810863907425,0,0.551365343546124,4.64407282668854,2.19225442626881,0.578775534266688,0,0.405820753925408,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0.43050537267123,1.68471475667626,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0.284136146806413,0,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0.211125408127993,0.398495976502139,0,0,0.511343412510774,0,0,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.457987967009312,0,0,0,0.166211681900156,0,0,0,0,0,2.53197677433632,0.816164040795739,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,1.13843818411917,1.38674673013139,0.347119476670262,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,1.09633539717401,1.58971689362392,0,0.391102765469606,0.801588202515337,0,0,0.288180834308212,0,0,0,0.745515213392595,0.471388069233591,3.66941356398758,2.92887969674533,0.407992870545287,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0.247247575143499,0.202210631562555,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0.662091970365432,0,3.25799761052228,3.4568859648050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| |||
|short_description=p19@DCBLD2 | |||
}} |
Revision as of 20:06, 21 January 2014
Short description: | p19@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DCBLD2_5end |
Coexpression cluster: | C504_leiomyoma_Lens_Ciliary_mesenchymal_Smooth_Mesothelial_Renal |
Association with transcript: | -50bp_to_ENST00000479144_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.45e-09 | 3 |
ciliated epithelial cell | 1.45e-09 | 3 |
multi-ciliated epithelial cell | 1.45e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.45e-09 | 3 |
smooth muscle cell of the subclavian artery | 1.90e-09 | 5 |
aortic smooth muscle cell | 9.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.63e-12 | 13 |
atypical epithelium | 6.39e-12 | 4 |
pigment epithelium of eye | 1.68e-11 | 11 |
female reproductive organ | 1.22e-09 | 37 |
female reproductive system | 1.22e-09 | 37 |
ciliary epithelium | 1.45e-09 | 3 |
ciliary body | 1.45e-09 | 3 |
thoracic segment blood vessel | 1.90e-09 | 5 |
subclavian artery | 1.90e-09 | 5 |
gonad | 5.17e-09 | 21 |
indifferent external genitalia | 5.17e-09 | 21 |
indifferent gonad | 5.17e-09 | 21 |
gonad primordium | 5.17e-09 | 21 |
reproductive structure | 5.84e-09 | 59 |
reproductive system | 5.84e-09 | 59 |
right ovary | 6.37e-09 | 5 |
external genitalia | 1.60e-08 | 22 |
female organism | 2.09e-08 | 41 |
reproductive organ | 6.40e-08 | 48 |
vasculature of eye | 6.42e-08 | 6 |
uvea | 6.42e-08 | 6 |
vasculature of head | 6.42e-08 | 6 |
systemic artery | 8.55e-08 | 33 |
systemic arterial system | 8.55e-08 | 33 |
left ovary | 4.75e-07 | 4 |
blood vessel smooth muscle | 9.26e-07 | 10 |
arterial system smooth muscle | 9.26e-07 | 10 |
artery smooth muscle tissue | 9.26e-07 | 10 |
aorta smooth muscle tissue | 9.26e-07 | 10 |
anterior segment of eyeball | 9.37e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.49e-21 | 14 |
female reproductive organ cancer | 4.91e-16 | 27 |
reproductive organ cancer | 1.09e-14 | 29 |
benign neoplasm | 4.99e-12 | 4 |
cell type benign neoplasm | 7.81e-10 | 3 |
leiomyoma | 7.81e-10 | 3 |