FFCP PHASE1:Hg19::chr4:90816033..90816048,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |||
|TSSclassifier=strong | |||
|UniProt=Q13201 | |||
|association_with_transcript=-3bp_to_ENST00000264790,NM_007351,uc003hst.2_5end | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_2_at_MMRN1_5end | |||
|id=chr4:90816033..90816048,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.65e-26!24;CL:0000115!3.58e-22!35;CL:0000071!5.04e-20!18;CL:0002546!5.04e-20!18;CL:0002078!3.81e-16!44;CL:1000413!8.64e-11!9;CL:0000213!6.77e-10!57;CL:0000215!6.77e-10!57;CL:0005020!4.92e-08!6;CL:0002138!4.92e-08!6;CL:0005022!4.92e-08!6;CL:0002543!8.01e-08!6;CL:0002544!1.01e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.34e-35;24!CL:0000071;9.86e-27;18!CL:0000115;5.92e-24;36!CL:1000413;3.88e-14;9!CL:0002078;4.75e-14;45!CL:0002138;2.19e-10;6!CL:0002543;4.29e-10;6!CL:0002544;5.82e-10;6!CL:0000213;3.59e-09;58!CL:0000215;3.59e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.30e-35,24;CL:0000115,2.46e-28,36;CL:0000071,9.62e-27,18;CL:0002546,9.62e-27,18;CL:0002078,1.38e-20,45;CL:1000413,3.88e-14,9;CL:0000213,8.72e-14,58;CL:0000215,8.72e-14,58;CL:0005020,2.18e-10,6;CL:0002138,2.18e-10,6;CL:0005022,2.18e-10,6;CL:0002543,4.24e-10,6;CL:0002544,5.80e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.86e-27;18!CL:0005022;2.19e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-55!115;UBERON:0001986!5.04e-20!18;UBERON:0004638!5.04e-20!18;UBERON:0004852!5.04e-20!18;UBERON:0000487!5.93e-15!22;UBERON:0006914!1.99e-13!25;UBERON:0001009!1.79e-12!113;UBERON:0004111!1.56e-11!241;UBERON:0004535!2.70e-11!110;UBERON:0003915!8.64e-11!9;UBERON:0004700!8.64e-11!9;UBERON:0001917!8.64e-11!9;UBERON:0000477!6.88e-10!286;UBERON:0000025!2.05e-09!194;UBERON:0000055!5.41e-09!69;UBERON:0001049!1.25e-08!57;UBERON:0005068!1.25e-08!57;UBERON:0006241!1.25e-08!57;UBERON:0007135!1.25e-08!57;UBERON:0002465!4.53e-07!10;UBERON:0002049!5.30e-07!79;UBERON:0007798!5.30e-07!79;UBERON:0004872!7.01e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.86e-27;18!UBERON:0001986;9.86e-27;18!UBERON:0004852;9.86e-27;18!UBERON:0000487;1.21e-20;22!UBERON:0006914;2.22e-17;25!UBERON:0003915;3.88e-14;9!UBERON:0004700;3.88e-14;9!UBERON:0001917;3.88e-14;9!UBERON:0000490;7.98e-11;33!UBERON:0002465;1.64e-09;10!UBERON:0007023;3.14e-09;114!UBERON:0001638;2.93e-08;9!UBERON:0003920;2.93e-08;9!UBERON:0004582;2.93e-08;9!UBERON:0000055;1.68e-07;65!UBERON:0001473;1.91e-07;8!UBERON:0004536;1.91e-07;8!UBERON:0006558;1.91e-07;8!UBERON:0002193;3.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.01e-39,114;UBERON:0004638,9.62e-27,18;UBERON:0001986,9.62e-27,18;UBERON:0004852,9.62e-27,18;UBERON:0000487,1.19e-20,22;UBERON:0006914,2.18e-17,25;UBERON:0001009,4.69e-16,112;UBERON:0004535,1.84e-14,109;UBERON:0003915,3.88e-14,9;UBERON:0004700,3.88e-14,9;UBERON:0001917,3.88e-14,9;UBERON:0000055,5.49e-13,68;UBERON:0002049,4.31e-10,78;UBERON:0007798,4.31e-10,78;UBERON:0002465,1.78e-09,10;UBERON:0004872,1.99e-09,83;UBERON:0007500,4.86e-09,59;UBERON:0001981,4.86e-09,59;UBERON:0004537,4.86e-09,59;UBERON:0006965,4.86e-09,59;UBERON:0004111,1.80e-08,240;UBERON:0001638,3.00e-08,9;UBERON:0003920,3.00e-08,9;UBERON:0004582,3.00e-08,9;UBERON:0001473,1.90e-07,8;UBERON:0004536,1.90e-07,8;UBERON:0006558,1.90e-07,8;UBERON:0003914,3.04e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,0.0774672005803016,0,20.2584303141045,0.553995408531877,0.200544447470142,0,0.671746422719773,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0.400395987036012,0,0.661044872784862,3.81621501814146,0,0,0,9.25199300053181,2.24203425192614,11.5888997301034,0,0,0.205601498999509,1.00311897234407,0,0,0,0.111410456885174,0.883817722424512,0,0,0.128091319725675,0,0.657751618414705,0.276350017785848,0,0,0.267540828089713,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0.670700859703636,2.9408389224012,0,0,0,0,0,0,0,0.43917392846563,1.70272798147026,0,0,0,0,0,0,0,0,105.145313496987,57.6357178721103,32.6312071511139,87.0574230562975,62.0859165590661,39.3418799974296,70.640298689442,279.865350180383,295.997530555343,333.381730313612,19.3358072212391,204.51319643828,67.605189940843,34.1926664721658,37.2665296025609,295.93929953344,127.757213024291,128.827533672921,22.9974956198825,51.260345616679,65.219820839225,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,2.69421344139376,0,0,0,0,0,18.2550982894224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38155454624648,0,0,0,1.26755034821831,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,80.4121114029181,52.7803484337336,221.075324896603,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.44737618286021,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,1.02056223165909,22.6711711907246,7.71136263451447,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0,18.0321770383514,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,19.0170477569094,0,0,0,0,3.04468565539302,2.29391162142713,6.26611905891579,3.09701308095126,5.34770955012053,5.83625980073446,1.08006287447623,7.9312517629427,0.106824071127473,0,0,0,0,0,0,3.5924286857907,18.9590316431043,59.2686031626872,0.649243880549111,1.68478306868075,0,0,0,26.5788091148517,0,0,0,0,0,0,0,0,5.01131113011436,0,18.9318974933188,31.3087649917951,0,0,8.79049075631364,0,0,0,0.47748896947538,0,0,0,1.1253553312841,0,0,0,2.78947183551498,3.03912307084262,0.251932747854276,0,0,0,0,0,0,16.6707355526418,9.57932369387759,0,0,0.74214478529481,0,0,0,13.0499923578263,0,0,0,0,0,0,0,0.723578631752448,0,0.442317039724898,0,1.09692698576986,0,0,21.3152216055518,0,0,0,0,22.0110800215024,0,26.6517388009317,0,130.607573320661,1.49590513710141,0,0,0,0,20.3438821094885,0,0,0,0,2.98578579323551,12.4725165949708,17.1088440581415,0,0,0,0.067401132980677,12.8412423567806,0.468528891450678,0,0,0,7.89168805698781,6.04953580243319,0,19.3350933663173,0,0,0,0,0,0,0,0,0,0,0,11.1825067674899,0,0,0,0,14.1603964073092,0,13.7848251876125,0,0,0.569797163602908,0,0,9.39193176853151,0,0,7.67395194311635,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,4.18923601908381,2.06244381610515,2.87149209830726,1.19807400299395,1.28767814440971,3.57074331906996,6.9198976661328,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,0.364497339948148,0,2.75819975547194,1.99327434912993,0,0,0,5.71756261098694,1.98627591109629,0,0,0,0,0,0.492555124496034,0,0,6.74140274919179,2.65013777824443,0.258565912723101,1.98348902614035,0,0,21.8914195763774,5.34494637338864,5.79934677486074,22.3274709815378,0,0,0,0,0.5013797880454,0,0,0,0,0.244052529803926,1.251909307065,1.14681839138014,1.99672292766334,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.798169295285756,0.41023272848151,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,10.0029736704512,0,1.56302802246618,0,0,0,0.202612753855184,0,0.826747186004736,0.19024743058172,0,1.09651553371436,11.9090682813431,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0.91064876540519,30.3362105956225,0,0,0.747667062745149,0.131545547125698,0,0,10.1256089777163,0,0,6.39211104356647,0,0,3.50235066465616,0,0.929931402945002,0,0,0,0,0,1.29068207646083,0,0,1.27016115057279,0,0,0,0,0,0,3.88457302312737,6.67308244565606,2.3196288626764,11.1713528403602,0,0,0,0,0,0,8.48915739187391,5.46398901259893,0,16.1797892357578,0,0.981542335574726,4.45569600490629,0.8453114551668,0,1.59772660565751,1.74036297528658,0,0,0,0,6.57302749421866,1.83491713361816,1.57673541466596,0,0.135982980381829,0,8.46442944824641,0,0,0,0,0,0,0,0,0,0,9.39655857906169,1.07185652062471,0.829169439458779,1.86179392551411,6.61025343893041,9.52257725854961,0.968833647540092,5.83502314381064,0,32.3327564053078,13.9460860381171,6.31378568901188,11.6359322368996,2.22261774948139,7.8894425931944,13.9717349749326,0,0,0,0,2.34640942403454,1.833621662743,23.5999783423128,29.9590548383481,7.24585656927694,0.320568492303233 | |||
|short_description=p2@MMRN1 | |||
}} |
Revision as of 02:16, 22 January 2014
Short description: | p2@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMRN1_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | -3bp_to_ENST00000264790, NM_007351, uc003hst.2_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | Q13201 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.30e-35 | 24 |
endothelial cell | 2.46e-28 | 36 |
blood vessel endothelial cell | 9.62e-27 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.62e-27 | 18 |
meso-epithelial cell | 1.38e-20 | 45 |
endothelial cell of artery | 3.88e-14 | 9 |
lining cell | 8.72e-14 | 58 |
barrier cell | 8.72e-14 | 58 |
lymphangioblast | 2.18e-10 | 6 |
endothelial cell of lymphatic vessel | 2.18e-10 | 6 |
vascular lymphangioblast | 2.18e-10 | 6 |
vein endothelial cell | 4.24e-10 | 6 |
aortic endothelial cell | 5.80e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.01e-39 | 114 |
blood vessel endothelium | 9.62e-27 | 18 |
endothelium | 9.62e-27 | 18 |
cardiovascular system endothelium | 9.62e-27 | 18 |
simple squamous epithelium | 1.19e-20 | 22 |
squamous epithelium | 2.18e-17 | 25 |
circulatory system | 4.69e-16 | 112 |
cardiovascular system | 1.84e-14 | 109 |
endothelial tube | 3.88e-14 | 9 |
arterial system endothelium | 3.88e-14 | 9 |
endothelium of artery | 3.88e-14 | 9 |
vessel | 5.49e-13 | 68 |
vasculature | 4.31e-10 | 78 |
vascular system | 4.31e-10 | 78 |
lymphoid system | 1.78e-09 | 10 |
splanchnic layer of lateral plate mesoderm | 1.99e-09 | 83 |
epithelial tube open at both ends | 4.86e-09 | 59 |
blood vessel | 4.86e-09 | 59 |
blood vasculature | 4.86e-09 | 59 |
vascular cord | 4.86e-09 | 59 |
anatomical conduit | 1.80e-08 | 240 |
vein | 3.00e-08 | 9 |
venous blood vessel | 3.00e-08 | 9 |
venous system | 3.00e-08 | 9 |
lymphatic vessel | 1.90e-07 | 8 |
lymph vasculature | 1.90e-07 | 8 |
lymphatic part of lymphoid system | 1.90e-07 | 8 |
epithelial tube | 3.04e-07 | 117 |