FFCP PHASE1:Hg19::chr5:151054160..151054186,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr5:151054160..151054186,+ | |||
|id=chr5:151054160..151054186,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.09e-26!180;CL:0000222!8.95e-19!119;CL:0000057!4.51e-15!75;CL:0000680!3.08e-13!57;CL:0000056!3.08e-13!57;CL:0000355!3.08e-13!57;CL:0000183!3.13e-13!59;CL:0000187!1.75e-12!54;CL:0000192!3.97e-11!42;CL:0000514!3.97e-11!42;CL:0000393!3.00e-10!60;CL:0000211!3.00e-10!60;CL:0000359!1.99e-09!32;CL:0000136!1.41e-07!15;CL:0000213!4.90e-07!57;CL:0000215!4.90e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.01e-10;19!CL:0000136;5.69e-10;13!CL:0000134;9.68e-10;55!CL:0002494;2.86e-08;16!CL:0000048;1.38e-07;58!CL:0000359;1.99e-07;32!CL:0000723;2.98e-07;61!CL:0002569;4.91e-07;6!CL:0000192;6.19e-07;43!CL:0002334;9.58e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.21e-17,76;CL:0000048,2.83e-12,427;CL:0000136,1.03e-11,15;CL:0000222,1.14e-11,121;CL:0000723,1.35e-11,433;CL:0000349,7.81e-11,19;CL:0000034,9.81e-11,441;CL:0000192,3.88e-09,43;CL:0000514,3.88e-09,43;CL:0000187,5.37e-09,55;CL:0000680,8.18e-09,58;CL:0000056,8.18e-09,58;CL:0000355,8.18e-09,58;CL:0002494,2.97e-08,16;CL:0000359,1.31e-07,32;CL:0000393,2.72e-07,61;CL:0000211,2.72e-07,61;CL:0002569,4.57e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;6.19e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!9.53e-15!84;UBERON:0004290!6.80e-14!70;UBERON:0001134!7.67e-14!61;UBERON:0002036!7.67e-14!61;UBERON:0003082!7.67e-14!61;UBERON:0002385!1.15e-13!63;UBERON:0001015!1.15e-13!63;UBERON:0000383!1.15e-13!63;UBERON:0002049!1.31e-13!79;UBERON:0007798!1.31e-13!79;UBERON:0000914!4.97e-13!83;UBERON:0002329!4.97e-13!83;UBERON:0003077!4.97e-13!83;UBERON:0003059!4.97e-13!83;UBERON:0007282!4.97e-13!83;UBERON:0009618!4.97e-13!83;UBERON:0007285!4.97e-13!83;UBERON:0004535!1.69e-12!110;UBERON:0001009!2.55e-12!113;UBERON:0001637!3.83e-12!42;UBERON:0003509!3.83e-12!42;UBERON:0004572!3.83e-12!42;UBERON:0000055!3.24e-11!69;UBERON:0001981!6.08e-11!60;UBERON:0007500!6.08e-11!60;UBERON:0004537!6.08e-11!60;UBERON:0006965!6.08e-11!60;UBERON:0000486!1.04e-10!82;UBERON:0004573!1.10e-09!33;UBERON:0004571!1.10e-09!33;UBERON:0005256!3.75e-09!143;UBERON:0003914!4.05e-09!118;UBERON:0000490!7.36e-09!138;UBERON:0000478!8.92e-08!24;UBERON:0000475!9.26e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.14e-08;24!UBERON:0003104;3.49e-08;7!UBERON:0009142;3.49e-08;7!UBERON:0004457;7.87e-08;9!UBERON:0000042;7.87e-08;9!UBERON:0003688;8.75e-08;6!UBERON:0002358;8.75e-08;6!UBERON:0003684;8.75e-08;6!UBERON:0001178;8.75e-08;6!UBERON:0002384;3.64e-07;198!UBERON:0003422;4.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.21e-10,78;UBERON:0001134,2.45e-09,62;UBERON:0002036,2.45e-09,62;UBERON:0003082,2.45e-09,62;UBERON:0000478,9.28e-09,24;UBERON:0002385,9.43e-09,64;UBERON:0001015,9.43e-09,64;UBERON:0000383,9.43e-09,64;UBERON:0007524,1.09e-08,73;UBERON:0002329,2.41e-08,71;UBERON:0003059,2.41e-08,71;UBERON:0007282,2.41e-08,71;UBERON:0004290,2.41e-08,71;UBERON:0009618,2.41e-08,71;UBERON:0003077,4.27e-08,72;UBERON:0007285,4.27e-08,72;UBERON:0004872,6.35e-08,83;UBERON:0003688,1.44e-07,6;UBERON:0002358,1.44e-07,6;UBERON:0003684,1.44e-07,6;UBERON:0001178,1.44e-07,6;UBERON:0005256,1.99e-07,122;UBERON:0001637,2.45e-07,42;UBERON:0003509,2.45e-07,42;UBERON:0004572,2.45e-07,42;UBERON:0003104,3.49e-07,160;UBERON:0009142,3.49e-07,160;UBERON:0003422,4.57e-07,6;UBERON:0000486,5.59e-07,83;UBERON:0002384,6.70e-07,371 | |||
|phase1_expression=9.99231085988061,3.42560838225573,12.6858963686374,7.00513088471913,15.1966772105278,27.0424942471114,0,0,1.30592814099919,0,0,1.52908960491121,2.37390280405608,0.990130823680373,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,0,0.123121058076788,1.22400414746552,0.626909442956176,0,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,2.17366355134002,2.1686349143074,3.00802746381534,2.462390822334,0,13.1391414981712,0.189069634328136,0.221729397462564,0.790513071238134,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.39752481473341,1.72046919021225,0.347140501607594,0.56530794192401,2.51699661725944,0.825354125820202,0.417989933073621,0.775250277507987,2.13459757612026,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,4.0507097394088,0.17859945656816,1.34717623575702,0.900891843866578,0,0,0.732806975721629,0,0,0,17.8909902610315,2.02608818663328,1.85372853138506,5.44989579422746,1.06400514659507,1.12135520028461,2.1349799145941,4.68668341992604,0,2.96363478553314,2.7788523529288,1.36221684880438,4.03323147135999,0,0,0.570471821544449,0.448346041655403,0.23486899728753,0.161872944368132,0.842704840213491,0.204154171254893,1.22834317311768,0.516628905878827,2.37600571456411,3.95627086845691,0,2.15585442544872,0,0.250237039743928,0.277064115484183,0,3.98434134538726,5.10809400282429,1.36118619792025,2.87023417102179,3.20336083227851,1.05965950579781,3.90118424909723,0,2.31876486041066,1.67505170698431,2.36286865137773,1.46155507741798,2.77677151668526,1.38074847963449,0.484938170456436,3.19508633264953,0.201504196455281,0.508681776931463,0,0.545492241181669,0,0,0,0,0.310983165046111,0.504641701751257,0,0,1.92972281457866,2.76269842704961,0,2.88751792667834,0,0,0,0,0,0,0,0,0,2.21446636387394,0,1.6462960453256,5.88034845542168,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.185176890317059,0,4.15973914111831,1.44331342025273,0.115930404975077,1.6437217193015,0.144366447761074,1.85194205030644,0.190254152234598,0,0,0,0.468008530278475,1.63494278517601,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.616964956219941,0,0,0.112131084345361,0.43596006883328,0.4400297149257,7.23921608243556,3.57656445851882,5.071816515336,0.797814349754612,3.12022310734098,0.514414748524284,0,0.799266537048298,1.28680194292333,8.68194568626309,3.29296134712308,0.65147236858747,2.13235169245527,1.58390374586686,1.80863626235752,0,1.99945982364114,0,0.502257091432126,0,3.83399768786532,3.44585807502342,0,0.868687840005475,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,1.35632511849868,2.9115920614313,1.96271887676878,3.78485796081443,1.7571212248907,1.80567659836631,0,1.03473071292505,0.664225598535437,1.65932251687533,0.521301686808497,0.391602314925481,2.74514739048685,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,7.44323423456331,4.45039722535381,8.70046292742528,8.58532300013196,1.02341449813341,10.9380666377653,11.8734453155993,0.771048469013278,2.48586415438378,0.164254312027618,0,1.04589340613963,0,0.601519410909855,0,0.918515585316854,0.546273504020151,0.786746489756545,0,0,0.784349769176855,0,0.105551628892876,2.27466768141793,1.36074964221213,1.29549549661284,6.16909010761157,0,3.51182841698397,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.247528499761764,0,0,4.82051789532479,0,0.924291702687866,1.5350367472613,0.551346289938122,0.429680979473094,0.725083469571143,0.681813019328807,1.24644849905432,0,0,0,0,0.929691098594572,6.2962469366128,0.6970372701606,0.308033580176089,0,0.869932992075073,2.7798632865588,0.858749320451947,2.232950216158,1.2655176988749,4.38449446024797,1.27948895655667,1.71175595213568,1.90921948755562,3.92474320099615,1.07923474549989,2.19629623788844,1.41374882814824,1.41527737101321,4.75530963519025,3.37006764991185,0.48763373908959,3.1682753652067,2.11300293513511,1.22849920267187,2.54529777516683,2.26016233240486,2.2054613741845,0.66343897524122,4.38450885253763,0.578775534266688,0,1.01455188481352,1.239293992399,1.69017361519345,0,2.65272410735427,0.7133421029625,0.709522128141196,1.89996871767898,3.62224382255892,0,1.04980416073495,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,2.62618933211459,2.37571744666111,0.921482106297696,0,0.422008249231538,0.333926115068718,0,0,0.796991953004279,0.552567831062295,0,1.02268682502155,0,4.3545542272653,0,0,0,0.197286811273867,0,2.22273980289274,0,0,0,0,0,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| |||
|short_description=p@chr5:151054160..151054186,+ | |||
}} |
Revision as of 08:33, 22 January 2014
Short description: | p@chr5:151054160..151054186, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:151054160..151054186, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.21e-17 | 76 |
multi fate stem cell | 2.83e-12 | 427 |
fat cell | 1.03e-11 | 15 |
mesodermal cell | 1.14e-11 | 121 |
somatic stem cell | 1.35e-11 | 433 |
extraembryonic cell | 7.81e-11 | 19 |
stem cell | 9.81e-11 | 441 |
smooth muscle cell | 3.88e-09 | 43 |
smooth muscle myoblast | 3.88e-09 | 43 |
muscle cell | 5.37e-09 | 55 |
muscle precursor cell | 8.18e-09 | 58 |
myoblast | 8.18e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.18e-09 | 58 |
cardiocyte | 2.97e-08 | 16 |
vascular associated smooth muscle cell | 1.31e-07 | 32 |
electrically responsive cell | 2.72e-07 | 61 |
electrically active cell | 2.72e-07 | 61 |
mesenchymal stem cell of umbilical cord | 4.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.21e-10 | 78 |
skeletal muscle tissue | 2.45e-09 | 62 |
striated muscle tissue | 2.45e-09 | 62 |
myotome | 2.45e-09 | 62 |
extraembryonic structure | 9.28e-09 | 24 |
muscle tissue | 9.43e-09 | 64 |
musculature | 9.43e-09 | 64 |
musculature of body | 9.43e-09 | 64 |
dense mesenchyme tissue | 1.09e-08 | 73 |
somite | 2.41e-08 | 71 |
presomitic mesoderm | 2.41e-08 | 71 |
presumptive segmental plate | 2.41e-08 | 71 |
dermomyotome | 2.41e-08 | 71 |
trunk paraxial mesoderm | 2.41e-08 | 71 |
paraxial mesoderm | 4.27e-08 | 72 |
presumptive paraxial mesoderm | 4.27e-08 | 72 |
splanchnic layer of lateral plate mesoderm | 6.35e-08 | 83 |
omentum | 1.44e-07 | 6 |
peritoneum | 1.44e-07 | 6 |
abdominal cavity | 1.44e-07 | 6 |
visceral peritoneum | 1.44e-07 | 6 |
trunk mesenchyme | 1.99e-07 | 122 |
artery | 2.45e-07 | 42 |
arterial blood vessel | 2.45e-07 | 42 |
arterial system | 2.45e-07 | 42 |
mesenchyme | 3.49e-07 | 160 |
entire embryonic mesenchyme | 3.49e-07 | 160 |
mesenchyme of umbilical cord | 4.57e-07 | 6 |
multilaminar epithelium | 5.59e-07 | 83 |
connective tissue | 6.70e-07 | 371 |