FFCP PHASE1:Hg19::chr6:21665769..21665780,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C724 | |||
|description=CAGE_peak_at_chr6:21665769..21665780,+ | |||
|id=chr6:21665769..21665780,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.15e-22!6;CL:0000031!4.15e-22!6;CL:0000404!4.15e-22!6;CL:0000047!1.60e-16!8;CL:0002605!9.95e-16!3;CL:0002319!4.00e-11!25;CL:0000133!4.74e-08!59;CL:0000128!5.25e-07!7;CL:0000126!5.25e-07!7;CL:0000127!5.25e-07!7;CL:0002453!5.25e-07!7;CL:1001319!7.49e-07!1;CL:1000600!7.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.46e-50;1!CL:1000600;1.46e-50;1!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.46e-50,1;CL:1000600,1.46e-50,1;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-09;6 | |||
|ontology_enrichment_disease=DOID:5409!5.22e-12!4;DOID:1325!4.73e-07!7;DOID:3904!4.73e-07!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004645!7.49e-07!1;UBERON:0001256!7.49e-07!1;UBERON:0001259!7.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.46e-50;1!UBERON:0001256;1.46e-50;1!UBERON:0001259;1.46e-50;1!UBERON:0001255;4.32e-26;2!UBERON:0001556;4.32e-26;2!UBERON:0002114;8.00e-18;2!UBERON:0000365;2.66e-11;5!UBERON:0002108;2.94e-11;4!UBERON:0005910;1.22e-09;6!UBERON:0003350;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.46e-50,1;UBERON:0001256,1.46e-50,1;UBERON:0001259,1.46e-50,1;UBERON:0001255,4.32e-26,2;UBERON:0001556,4.32e-26,2;UBERON:0002114,8.00e-18,2;UBERON:0000365,2.66e-11,5;UBERON:0002108,2.94e-11,4;UBERON:0005910,1.22e-09,6;UBERON:0003350,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,1.24632101408756,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.33883824611688,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18175345170189,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,4.72138957943652,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr6:21665769..21665780,+ | |||
}} |
Revision as of 10:24, 22 January 2014
Short description: | p@chr6:21665769..21665780, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21665769..21665780, + |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.46e-50 | 1 |
lower urinary tract cell | 1.46e-50 | 1 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.46e-50 | 1 |
wall of urinary bladder | 1.46e-50 | 1 |
mucosa of urinary bladder | 1.46e-50 | 1 |
urinary bladder | 4.32e-26 | 2 |
lower urinary tract | 4.32e-26 | 2 |
duodenum | 8.00e-18 | 2 |
urothelium | 2.66e-11 | 5 |
small intestine | 2.94e-11 | 4 |
transitional epithelium | 1.22e-09 | 6 |
epithelium of mucosa | 1.49e-07 | 8 |