FFCP PHASE1:Hg19::chr6:31804851..31804855,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=26797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10202 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000364884,NR_002742,uc003nxp.2_5end | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD52_5end | |||
|id=chr6:31804851..31804855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.97e-19;1!UBERON:0003056;2.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.97e-19;1!UBERON:0001785;2.97e-19;1!UBERON:0002464;2.97e-19;1!UBERON:0004904;2.97e-19;1!UBERON:0001021;2.97e-19;1!UBERON:0003714;2.60e-10;2!UBERON:0005162;2.60e-10;2!UBERON:0000122;2.60e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.25e-19,1;UBERON:0001785,2.25e-19,1;UBERON:0002464,2.25e-19,1;UBERON:0004904,2.25e-19,1;UBERON:0001021,2.25e-19,1;UBERON:0003902,2.25e-19,1;UBERON:0005425,2.25e-19,1;UBERON:0003714,2.27e-10,2;UBERON:0005162,2.27e-10,2;UBERON:0000122,2.27e-10,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0.286836620748814,0,0,2.1349799145941,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0.504867548488229,0,0,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.220587945464788,0,0,0.269662616320329,0.392442930250692,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,26.204385329236,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0.385029108839245,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,1.56869953835371,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0.55597265731176,0,0,0,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0.59873811429845,0,0.423347165447766,0,0.280797178113459,0,0,2.50634477090067,0,0,0.201799707191048,0,0,0,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.455768223388005,0.23056390438806,0.179515288819544,0.325942115766024,0,0,0,1.02193298195737,0.470940769185074,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0.60129367765797,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0.19351266257817,0.0730893170861856,0.246346371159628,0,0.176512253383001,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0,0,0.144090417154106,0.229073192331831,0.514784993585894,0.288109595976299,0.124252535565433,0,0,0,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0.272406812223151,0.321506296930038,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.211200673038813,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,0,0.213574825135389,0.157204305099666,0,0,0.395223263795889,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0.691743174681154,0.249960815924213,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0,0,0,0,0,0,0.394308725006267,0,0.35267594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| |||
|short_description=p1@SNORD52 | |||
}} |
Revision as of 11:09, 22 January 2014
Short description: | p1@SNORD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNORD52_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000364884, NR_002742, uc003nxp.2_5end |
EntrezGene: | SNORD52 |
HGNC: | 10202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.25e-19 | 1 |
cranial nerve | 2.25e-19 | 1 |
nerve trunk | 2.25e-19 | 1 |
nerve connecting eye with brain | 2.25e-19 | 1 |
nerve | 2.25e-19 | 1 |
retinal neural layer | 2.25e-19 | 1 |
presumptive neural retina | 2.25e-19 | 1 |
neural tissue | 2.27e-10 | 2 |
multi cell component structure | 2.27e-10 | 2 |
neuron projection bundle | 2.27e-10 | 2 |