FFCP PHASE1:Hg19::chr6:125589247..125589266,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:125589247..125589266,+ | |||
|id=chr6:125589247..125589266,+ | |||
|ontology_enrichment_celltype=CL:0005020!9.19e-19!6;CL:0002138!9.19e-19!6;CL:0005022!9.19e-19!6;CL:0002139!2.55e-13!24;CL:0002586!1.96e-10!3;CL:0000064!4.90e-10!3;CL:0005012!4.90e-10!3;CL:0000067!4.90e-10!3;CL:0002304!4.90e-10!3;CL:0002144!5.53e-10!3;CL:0000066!1.05e-09!254;CL:0000115!2.31e-08!35;CL:0000149!6.61e-08!4;CL:0000159!8.33e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.82e-28;6!CL:0000159;8.69e-23;2!CL:0002586;5.88e-15;3!CL:0000313;2.63e-12;1!CL:0000319;2.93e-12;1!CL:0000342;1.13e-11;1!CL:0002565;1.13e-11;1!CL:0000149;1.87e-11;4!CL:0002139;8.26e-11;24!CL:0000147;2.86e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,6.70e-28,6;CL:0002138,6.70e-28,6;CL:0005022,6.70e-28,6;CL:0000159,8.70e-23,2;CL:0002586,4.28e-15,3;CL:0000313,2.63e-12,1;CL:0000319,2.93e-12,1;CL:0000342,1.47e-11,1;CL:0002565,1.47e-11,1;CL:0000149,1.47e-11,4;CL:0002139,9.08e-11,24;CL:0000066,2.48e-08,253;CL:0000147,2.74e-07,14;CL:0000115,3.89e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;3.82e-28;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.63e-12;1!DOID:3030;2.93e-12;1!DOID:299;3.68e-07;25!DOID:4468;9.96e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.63e-12,1;DOID:3030,2.93e-12,1;DOID:299,3.68e-07,25;DOID:4468,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.93e-17!11;UBERON:0001473!7.14e-14!8;UBERON:0004536!7.14e-14!8;UBERON:0006558!7.14e-14!8;UBERON:0000488!6.94e-13!4;UBERON:0000019!1.07e-11!19;UBERON:0000047!1.07e-11!19;UBERON:0004088!1.07e-11!19;UBERON:0003072!1.07e-11!19;UBERON:0003071!1.07e-11!19;UBERON:0004128!1.07e-11!19;UBERON:0000970!5.09e-11!20;UBERON:0002465!6.18e-11!10;UBERON:0001781!1.96e-10!3;UBERON:0001782!1.96e-10!3;UBERON:0005424!1.96e-10!3;UBERON:0002104!2.08e-10!21;UBERON:0001456!2.08e-10!21;UBERON:0000966!2.53e-10!5;UBERON:0005388!2.53e-10!5;UBERON:0001802!2.53e-10!5;UBERON:0001778!4.90e-10!3;UBERON:0001775!4.90e-10!3;UBERON:0001915!5.53e-10!3;UBERON:0001982!5.53e-10!3;UBERON:0000020!2.41e-09!23;UBERON:0001032!7.02e-09!24;UBERON:0004456!7.02e-09!24;UBERON:0002203!1.41e-08!6;UBERON:0001768!1.41e-08!6;UBERON:0005085!4.79e-07!29;UBERON:0001905!7.62e-07!2;UBERON:0002757!7.62e-07!2;UBERON:0010134!7.62e-07!2;UBERON:0002784!7.62e-07!2;UBERON:0005408!7.62e-07!2;UBERON:0001899!7.62e-07!2;UBERON:0002200!8.42e-07!11;UBERON:0006876!8.42e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.37e-21;8!UBERON:0004536;3.37e-21;8!UBERON:0006558;3.37e-21;8!UBERON:0002465;5.06e-17;10!UBERON:0007625;2.23e-15;11!UBERON:0001781;5.88e-15;3!UBERON:0001782;5.88e-15;3!UBERON:0004911;2.63e-12;1!UBERON:0007029;1.13e-11;1!UBERON:0002506;1.13e-11;1!UBERON:0001769;1.13e-11;1!UBERON:0000488;2.77e-11;4!UBERON:0000966;2.41e-09;5!UBERON:0005388;2.41e-09;5!UBERON:0001802;2.41e-09;5!UBERON:0000019;5.33e-09;19!UBERON:0000047;5.33e-09;19!UBERON:0004088;5.33e-09;19!UBERON:0010230;5.33e-09;19!UBERON:0000970;1.47e-08;20!UBERON:0002104;3.69e-08;21!UBERON:0001456;3.69e-08;21!UBERON:0010371;5.24e-08;31!UBERON:0002203;8.12e-08;6!UBERON:0001768;8.12e-08;6!UBERON:0002200;8.12e-08;6!UBERON:0000020;1.83e-07;23!UBERON:0001032;3.69e-07;24!UBERON:0004456;3.69e-07;24!UBERON:0002294;6.48e-07;7!UBERON:0001173;6.48e-07;7!UBERON:0004909;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.12e-21,8;UBERON:0004536,5.12e-21,8;UBERON:0006558,5.12e-21,8;UBERON:0002465,7.06e-17,10;UBERON:0007625,2.19e-15,11;UBERON:0001782,4.28e-15,3;UBERON:0005424,4.28e-15,3;UBERON:0004911,2.63e-12,1;UBERON:0007029,8.64e-12,1;UBERON:0002506,1.47e-11,1;UBERON:0001769,1.47e-11,1;UBERON:0001781,1.47e-11,4;UBERON:0000488,3.41e-11,4;UBERON:0000019,1.46e-08,20;UBERON:0000047,1.46e-08,20;UBERON:0010312,1.46e-08,20;UBERON:0004088,1.46e-08,20;UBERON:0010230,1.46e-08,20;UBERON:0003072,1.46e-08,20;UBERON:0004128,1.46e-08,20;UBERON:0003071,1.46e-08,20;UBERON:0000970,3.66e-08,21;UBERON:0002104,3.66e-08,21;UBERON:0000966,5.36e-08,6;UBERON:0005388,5.36e-08,6;UBERON:0001802,5.36e-08,6;UBERON:0001456,8.45e-08,22;UBERON:0002203,9.33e-08,6;UBERON:0001768,9.33e-08,6;UBERON:0002200,9.33e-08,6;UBERON:0000020,3.66e-07,24;UBERON:0001032,3.66e-07,24;UBERON:0004456,3.66e-07,24;UBERON:0004909,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23350366406548,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.665188192387692,0.966182642624386,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,1.03366703667732,1.06729878806013,0.66944122552934,0.805658634218294,1.52054421143703,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.695582429850461,0,2.59859605969933,0.925971025153221,2.85381228351897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,0.984043937099117,2.60302715731442,0,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0792278037769,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36269994427607,0,0,0,0.229073192331831,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0,0,27.2807928716628,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,5.58371494195776,0.955538938977433,31.0958100397863,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr6:125589247..125589266,+ | |||
}} |
Revision as of 13:44, 22 January 2014
Short description: | p@chr6:125589247..125589266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:125589247..125589266, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 6.70e-28 | 6 |
endothelial cell of lymphatic vessel | 6.70e-28 | 6 |
vascular lymphangioblast | 6.70e-28 | 6 |
seromucus secreting cell | 8.70e-23 | 2 |
retinal pigment epithelial cell | 4.28e-15 | 3 |
serous secreting cell | 2.63e-12 | 1 |
mucus secreting cell | 2.93e-12 | 1 |
pigment cell (sensu Vertebrata) | 1.47e-11 | 1 |
iris pigment epithelial cell | 1.47e-11 | 1 |
visual pigment cell | 1.47e-11 | 4 |
endothelial cell of vascular tree | 9.08e-11 | 24 |
epithelial cell | 2.48e-08 | 253 |
pigment cell | 2.74e-07 | 14 |
endothelial cell | 3.89e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.12e-21 | 8 |
lymph vasculature | 5.12e-21 | 8 |
lymphatic part of lymphoid system | 5.12e-21 | 8 |
lymphoid system | 7.06e-17 | 10 |
pigment epithelium of eye | 2.19e-15 | 11 |
pigmented layer of retina | 4.28e-15 | 3 |
presumptive retinal pigmented epithelium | 4.28e-15 | 3 |
epithelium of female gonad | 2.63e-12 | 1 |
surface | 8.64e-12 | 1 |
iris epithelium | 1.47e-11 | 1 |
iris | 1.47e-11 | 1 |
layer of retina | 1.47e-11 | 4 |
atypical epithelium | 3.41e-11 | 4 |
camera-type eye | 1.46e-08 | 20 |
simple eye | 1.46e-08 | 20 |
immature eye | 1.46e-08 | 20 |
ocular region | 1.46e-08 | 20 |
eyeball of camera-type eye | 1.46e-08 | 20 |
optic cup | 1.46e-08 | 20 |
optic vesicle | 1.46e-08 | 20 |
eye primordium | 1.46e-08 | 20 |
eye | 3.66e-08 | 21 |
visual system | 3.66e-08 | 21 |
retina | 5.36e-08 | 6 |
photoreceptor array | 5.36e-08 | 6 |
posterior segment of eyeball | 5.36e-08 | 6 |
face | 8.45e-08 | 22 |
vasculature of eye | 9.33e-08 | 6 |
uvea | 9.33e-08 | 6 |
vasculature of head | 9.33e-08 | 6 |
sense organ | 3.66e-07 | 24 |
sensory system | 3.66e-07 | 24 |
entire sense organ system | 3.66e-07 | 24 |
epithelium of gonad | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.63e-12 | 1 |
mucinous adenocarcinoma | 2.93e-12 | 1 |
adenocarcinoma | 3.68e-07 | 25 |
clear cell adenocarcinoma | 9.96e-07 | 2 |