FFCP PHASE1:Hg19::chr7:73483843..73483855,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=49bp_to_AF086171_5end | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_23_at_ELN_5end | |||
|id=chr7:73483843..73483855,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.01e-24!75;CL:0002620!1.06e-16!23;CL:0002334!2.01e-12!12;CL:0000136!4.25e-10!15;CL:0000055!1.59e-09!180;CL:0002615!4.43e-09!3;CL:0002580!8.40e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.26e-31;3!CL:0000136;1.19e-27;13!CL:0002617;4.46e-21;2!CL:0002580;3.06e-14;3!CL:0000214;3.06e-14;3!CL:0002581;1.69e-11;1!CL:0002616;1.69e-11;1!CL:0000153;1.14e-10;9!CL:0000447;1.14e-10;9!CL:0002334;4.47e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.01e-31,3;CL:0000136,6.61e-24,15;CL:0002617,4.25e-21,2;CL:0002580,2.77e-14,3;CL:0000214,3.17e-14,3;CL:0002581,1.18e-11,1;CL:0002616,1.60e-11,1;CL:0000153,1.14e-10,9;CL:0000447,1.14e-10,9;CL:0002334,3.95e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.44e-08!5;DOID:450!8.44e-08!5;DOID:66!8.44e-08!5;DOID:423!8.44e-08!5;DOID:0080000!8.44e-08!5;DOID:11722!8.44e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;4.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.68e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!1.34e-12!12;UBERON:0000042!1.34e-12!12;UBERON:0002199!2.39e-12!45;UBERON:0002416!2.39e-12!45;UBERON:0003102!9.47e-12!95;UBERON:0001443!3.54e-11!11;UBERON:0002097!3.70e-11!40;UBERON:0003688!4.79e-11!6;UBERON:0002358!4.79e-11!6;UBERON:0003684!4.79e-11!6;UBERON:0001178!4.79e-11!6;UBERON:0000310!3.61e-09!10;UBERON:0000475!9.66e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.06e-28;9!UBERON:0000042;6.06e-28;9!UBERON:0001443;1.14e-22;11!UBERON:0005406;3.13e-21;2!UBERON:0000310;3.03e-16;10!UBERON:0003688;6.11e-16;6!UBERON:0002358;6.11e-16;6!UBERON:0003684;6.11e-16;6!UBERON:0001178;6.11e-16;6!UBERON:0006915;3.06e-14;3!UBERON:0007616;3.06e-14;3!UBERON:0002217;3.06e-14;3!UBERON:0002018;3.06e-14;3!UBERON:0002426;1.69e-11;1!UBERON:0003831;1.69e-11;1!UBERON:0003898;1.69e-11;1!UBERON:0004830;1.69e-11;1!UBERON:0003830;1.69e-11;1!UBERON:0005175;1.69e-11;1!UBERON:0001774;1.69e-11;1!UBERON:0001103;1.69e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.12e-22,11;UBERON:0005406,2.08e-21,2;UBERON:0004457,6.48e-21,12;UBERON:0000042,6.48e-21,12;UBERON:0000310,2.80e-16,10;UBERON:0003688,6.77e-16,6;UBERON:0002358,6.77e-16,6;UBERON:0003684,6.77e-16,6;UBERON:0001178,6.77e-16,6;UBERON:0006915,3.17e-14,3;UBERON:0007616,3.17e-14,3;UBERON:0002217,3.17e-14,3;UBERON:0002018,3.17e-14,3;UBERON:0002426,1.97e-11,1;UBERON:0003831,1.97e-11,1;UBERON:0003898,1.97e-11,1;UBERON:0004830,1.97e-11,1;UBERON:0003830,1.97e-11,1;UBERON:0005175,1.97e-11,1;UBERON:0001774,1.97e-11,1;UBERON:0001103,1.97e-11,1;UBERON:0010084,1.97e-11,1;UBERON:0004458,5.41e-07,49 | |||
|phase1_expression=1.63510541343501,4.06790995392868,2.96004248601539,2.00146596706261,7.15137751083661,2.61701557230111,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,1.72101972449288,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.612975591598039,0.751190294532984,0.113432183160021,1.07633781413317,0.640672166455702,0,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0.368199594569197,0.161646056818812,0.710019185033229,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,1.68808170616869,2.52594084989766,0.512556597022804,0,0.64341568457443,2.96836132889982,0,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0.404234377916439,0.217716747896961,0.684466602170562,0,0,2.32862249582209,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p23@ELN | |||
}} |
Revision as of 17:22, 22 January 2014
Short description: | p23@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | 49bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.01e-31 | 3 |
fat cell | 6.61e-24 | 15 |
adipocyte of breast | 4.25e-21 | 2 |
preadipocyte of the breast | 2.77e-14 | 3 |
synovial cell | 3.17e-14 | 3 |
perirenal preadipocyte | 1.18e-11 | 1 |
perirenal adipocyte cell | 1.60e-11 | 1 |
GAG secreting cell | 1.14e-10 | 9 |
carbohydrate secreting cell | 1.14e-10 | 9 |
preadipocyte | 3.95e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
chest | 1.12e-22 | 11 |
perirenal fat | 2.08e-21 | 2 |
cavity lining | 6.48e-21 | 12 |
serous membrane | 6.48e-21 | 12 |
breast | 2.80e-16 | 10 |
omentum | 6.77e-16 | 6 |
peritoneum | 6.77e-16 | 6 |
abdominal cavity | 6.77e-16 | 6 |
visceral peritoneum | 6.77e-16 | 6 |
stratified squamous epithelium | 3.17e-14 | 3 |
layer of synovial tissue | 3.17e-14 | 3 |
synovial joint | 3.17e-14 | 3 |
synovial membrane of synovial joint | 3.17e-14 | 3 |
chest muscle | 1.97e-11 | 1 |
respiratory system muscle | 1.97e-11 | 1 |
skeletal muscle of trunk | 1.97e-11 | 1 |
respiratory system skeletal muscle | 1.97e-11 | 1 |
thoracic segment muscle | 1.97e-11 | 1 |
chest organ | 1.97e-11 | 1 |
muscle of trunk | 1.97e-11 | 1 |
diaphragm | 1.97e-11 | 1 |
future diaphragm | 1.97e-11 | 1 |
body cavity or lining | 5.41e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.68e-11 | 1 |