FFCP PHASE1:Hg19::chr8:71053651..71053662,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-174bp_to_ENST00000522054_5end | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_24_at_NCOA2_5end | |||
|id=chr8:71053651..71053662,- | |||
|ontology_enrichment_celltype=CL:0000842!2.36e-18!3;CL:0000623!1.34e-17!3;CL:0000825!1.34e-17!3;CL:0000791!2.83e-15!18;CL:0000789!2.83e-15!18;CL:0002420!2.83e-15!18;CL:0002419!2.83e-15!18;CL:0000790!2.83e-15!18;CL:0000084!4.84e-14!25;CL:0000827!4.84e-14!25;CL:0000224!6.68e-14!4;CL:0000838!1.54e-11!52;CL:0000542!2.79e-11!53;CL:0000051!2.79e-11!53;CL:0000738!1.71e-09!140;CL:0000624!1.77e-09!6;CL:0000080!1.99e-09!6;CL:0000625!8.55e-09!11;CL:0000767!1.62e-08!3;CL:0002087!7.92e-08!119;CL:0000037!4.67e-07!172;CL:0000566!4.67e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.17e-15;11!CL:0000084;4.96e-15;25!CL:0000791;8.11e-10;18!CL:0000789;8.11e-10;18!CL:0002419;8.11e-10;18!CL:0000542;6.53e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.17e-15,11;CL:0000084,4.84e-15,25;CL:0000827,4.84e-15,25;CL:0000791,8.11e-10,18;CL:0000789,8.11e-10,18;CL:0002420,8.11e-10,18;CL:0002419,8.11e-10,18;CL:0000790,8.11e-10,18;CL:0000838,1.20e-07,52;CL:0000542,1.62e-07,53;CL:0000051,1.62e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.11e-10;18!CL:0000051;6.53e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002363!8.18e-07!1;UBERON:0007647!8.18e-07!1;UBERON:0010115!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.53e-11;4!UBERON:0000923;2.53e-11;4!UBERON:0010316;2.53e-11;4!UBERON:0005291;2.53e-11;4!UBERON:0002050;2.53e-09;5!UBERON:0005423;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.616804496998528,0,0,0.473447805734733,0,0,0.883817722424512,0.443067789167242,0.541607727530031,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,1.03088233644789,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,1.00803371612366,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44876399560722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,13.5420858156908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@NCOA2 | |||
}} |
Revision as of 22:27, 22 January 2014
Short description: | p24@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_NCOA2_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -174bp_to_ENST00000522054_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.17e-15 | 11 |
T cell | 4.84e-15 | 25 |
pro-T cell | 4.84e-15 | 25 |
mature alpha-beta T cell | 8.11e-10 | 18 |
alpha-beta T cell | 8.11e-10 | 18 |
immature T cell | 8.11e-10 | 18 |
mature T cell | 8.11e-10 | 18 |
immature alpha-beta T cell | 8.11e-10 | 18 |
lymphoid lineage restricted progenitor cell | 1.20e-07 | 52 |
lymphocyte | 1.62e-07 | 53 |
common lymphoid progenitor | 1.62e-07 | 53 |