CL:0000680: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0000222 | |develops_from=CL:0000222 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000680 | |||
|is_a=CL:0000055 ;;CL:0002371 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=muscle precursor cell | |||
|namespace=cell | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 10:19, 12 September 2014
| Name: | muscle precursor cell |
|---|---|
| Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000055(non-terminally differentiated cell),CL:0002371(somatic cell) |
|---|---|
| develops_from: | CL:0000222(mesodermal cell) |
Children
| is a: | CL:0000056 (myoblast),CL:0000594 (skeletal muscle satellite cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11241-116D8 (Myoblast, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11322-117D8 (Myoblast, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
- 11398-118D3 (Myoblast, donor3)
- 13469-144I4 (Myoblast differentiation to myotubes)
- 13470-144I5 (Myoblast differentiation to myotubes)
- 13471-144I6 (Myoblast differentiation to myotubes)
- 13472-144I7 (Myoblast differentiation to myotubes)
... further results Mouse (Mus musculus)
- 11240-116D7 (Skeletal Muscle Satellite Cells, donor1)
- 11241-116D8 (Myoblast, donor1)
- 11321-117D7 (Skeletal Muscle Satellite Cells, donor2)
- 11322-117D8 (Myoblast, donor2)
- 11397-118D2 (Skeletal Muscle Satellite Cells, donor3)
- 11398-118D3 (Myoblast, donor3)
- 13469-144I4 (Myoblast differentiation to myotubes)
- 13470-144I5 (Myoblast differentiation to myotubes)
- 13471-144I6 (Myoblast differentiation to myotubes)
- 13472-144I7 (Myoblast differentiation to myotubes)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000680 (muscle precursor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.36e-86 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_3eab162da9f2fce23e1e965e3359bce5 | p@chrX:160838683..160838694, + |
| 1.36e-86 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_3eab162da9f2fce23e1e965e3359bce5 | p@chrX:160838683..160838694, + |
| 1.01e-74 | FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_b898ded0601f5898b9bac28c56d8d323 | p@chr12:105433069..105433075, - |
| 1.01e-74 | FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_b898ded0601f5898b9bac28c56d8d323 | p@chrX:65748600..65748616, + |
| 1.01e-74 | FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_b898ded0601f5898b9bac28c56d8d323 | p@chrX:65748600..65748616, + |
| 1.01e-74 | FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_b898ded0601f5898b9bac28c56d8d323 | p@chr12:105433069..105433075, - |
| 2.48e-72 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_da2cae1ef22318d80f6b4e608de234f7 | p@chrX:160838787..160838800, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_da2cae1ef22318d80f6b4e608de234f7 | p@chrX:160838787..160838800, + |
| 1.74e-65 | FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_0d5d8fd7ccb5ae76d2ce0accdaf074d5 | p@chr11:81849982..81850000, + |
| 1.74e-65 | FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_0d5d8fd7ccb5ae76d2ce0accdaf074d5 | p@chr11:81849982..81850000, + |
| 1.33e-60 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_6da7eb1b621d3e83418473e63cf6e8a9 | p@chr17:14813242..14813246, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_6da7eb1b621d3e83418473e63cf6e8a9 | p@chr17:14813242..14813246, - |
| 1.36e-58 | FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_940a10c1cdb72ef7c9b7f0ba9cd26103 | p4@Gpr39 |
| 1.36e-58 | FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_940a10c1cdb72ef7c9b7f0ba9cd26103 | p4@Gpr39 |
| 3.91e-58 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160840025..160840037, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160840048..160840057, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160823859..160823870, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160840025..160840037, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160840048..160840057, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_41c3605aa82a4046b2a6ba36f7454f20 | p@chrX:160823859..160823870, + |
| 1.02e-52 | FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_3901c1d63b59a5b2b4cad6c990354f42 | p11@Fam198b |
| 1.02e-52 | FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_3901c1d63b59a5b2b4cad6c990354f42 | p11@Fam198b |
| 1.99e-52 | FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_d05b827861aed0d97b93c89fbb423bc9 | p@chr1:127574253..127574264, + |
| 1.99e-52 | FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_d05b827861aed0d97b93c89fbb423bc9 | p@chr1:127574253..127574264, + |
| 3.23e-52 | FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_712143f14cc0bd1aa940237eccbca528 | p7@Gpr39 |
| 3.23e-52 | FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_712143f14cc0bd1aa940237eccbca528 | p7@Gpr39 |
| 4.11e-52 | FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_25a812f89e7a67597fb20e11346784a1 | p11@Gpr39 |
| 4.11e-52 | FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_25a812f89e7a67597fb20e11346784a1 | p11@Gpr39 |
| 5.23e-52 | FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_bed0e6d699f6815aac4bff35b8f7e4dd | p@chrX:160839768..160839780, + |
| 5.23e-52 | FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_bed0e6d699f6815aac4bff35b8f7e4dd | p@chrX:160839768..160839780, + |
| 1.37e-51 | FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_61e92ddc285e03bef81b2061eb678e9d | p8@Gpr39 |
| 1.37e-51 | FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_61e92ddc285e03bef81b2061eb678e9d | p8@Gpr39 |
| 9.51e-51 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_752ec6394fe57fe96bb0c40ced7ea475 | p@chr6:53359400..53359406, + |
| 9.51e-51 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_752ec6394fe57fe96bb0c40ced7ea475 | p@chr6:53359400..53359406, + |
| 3.73e-48 | FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_035ee46cb2207ea4b3c22ffb6fd32986 | p@chr7:96658543..96658553, - |
| 3.73e-48 | FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_035ee46cb2207ea4b3c22ffb6fd32986 | p@chr7:96658543..96658553, - |
| 6.34e-47 | FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_bed1342a7344644b22397d34d720d855 | p2@Il6 |
| 6.34e-47 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_bed1342a7344644b22397d34d720d855 | p@chr7:91081998..91082010, - |
| 6.34e-47 | FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_bed1342a7344644b22397d34d720d855 | p2@Il6 |
| 6.34e-47 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_bed1342a7344644b22397d34d720d855 | p@chr7:91081998..91082010, - |
| 7.16e-47 | FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_433968ea72673ca56fdda1a6f3563f59 | p@chr18:52678391..52678395, - |
| 7.16e-47 | FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_433968ea72673ca56fdda1a6f3563f59 | p@chr18:52678391..52678395, - |
| 8.31e-47 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_cd5793a7f0c9e6c15adf9fb0be034577 | p@chr10:67598037..67598049, - |
| 8.31e-47 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_cd5793a7f0c9e6c15adf9fb0be034577 | p@chr10:67598037..67598049, - |
| 1.86e-46 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_7c3407716ef9383983d3933eadf7ed3b | p@chr2:65009852..65009866, - |
| 1.86e-46 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_7c3407716ef9383983d3933eadf7ed3b | p@chr2:65009852..65009866, - |
| 5.11e-46 | FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_cebfc75f81eb3c6507b4481fe51a3b55 | p@chr6:91222095..91222107, + |
| 5.11e-46 | FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_cebfc75f81eb3c6507b4481fe51a3b55 | p@chr6:91222095..91222107, + |
| 7.81e-46 | FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_4311a8b43f51237726669147a8a49630 | p9@Kctd10 |
| 7.81e-46 | FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_4311a8b43f51237726669147a8a49630 | p9@Kctd10 |
| 9.65e-46 | FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_965fc646a9b5e9d1c6be3814b8020aa3 | p6@Gpr39 |
| 9.65e-46 | FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_965fc646a9b5e9d1c6be3814b8020aa3 | p6@Gpr39 |
| 1.69e-44 | FFCP PHASE1:Mm9::chrX:70740923..70740934,+#_47970f039548983042f9f99ca98d7537 | p@chrX:70740923..70740934, + |
| 1.69e-44 | FFCP PHASE2:Mm9::chrX:70740923..70740934,+#_47970f039548983042f9f99ca98d7537 | p@chrX:70740923..70740934, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:14827154..14827169, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chrX:160839744..160839754, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr9:102766842..102766853, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:14802633..14802637, - |
| 5.38e-44 | FFCP PHASE2:Mm9::chrX:160829660..160829667,+#_5186c9b09f2b636e117b6f63c57bcf79 | p14@Figf |
| 5.38e-44 | FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr9:56096674..56096680, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr16:85900926..85900936,-#_5186c9b09f2b636e117b6f63c57bcf79 | p9@Adamts5 |
| 5.38e-44 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:14827154..14827169, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr9:102766842..102766853, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr2:112043522..112043530, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr7:106471695..106471701, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:14802633..14802637, - |
| 5.38e-44 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chrX:160839744..160839754, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:87574327..87574332, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_5186c9b09f2b636e117b6f63c57bcf79 | p3@E030003E18Rik |
| 5.38e-44 | FFCP PHASE1:Mm9::chr16:85900926..85900936,-#_5186c9b09f2b636e117b6f63c57bcf79 | p9@Adamts5 |
| 5.38e-44 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr2:178190171..178190178, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr2:178190171..178190178, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chrX:160839338..160839364,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chrX:160839338..160839364, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr2:112043522..112043530, - |
| 5.38e-44 | FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr9:56096674..56096680, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr8:69228447..69228492, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_5186c9b09f2b636e117b6f63c57bcf79 | p5@Adamts2 |
| 5.38e-44 | FFCP PHASE1:Mm9::chrX:160829660..160829667,+#_5186c9b09f2b636e117b6f63c57bcf79 | p14@Figf |
| 5.38e-44 | FFCP PHASE2:Mm9::chr7:106471695..106471701,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr7:106471695..106471701, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_5186c9b09f2b636e117b6f63c57bcf79 | p5@Adamts2 |
| 5.38e-44 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr8:69228447..69228492, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chrX:160839338..160839364,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chrX:160839338..160839364, + |
| 5.38e-44 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_5186c9b09f2b636e117b6f63c57bcf79 | p@chr17:87574327..87574332, + |
| 5.38e-44 | FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_5186c9b09f2b636e117b6f63c57bcf79 | p3@E030003E18Rik |
| 2.46e-41 | FFCP PHASE1:Mm9::chrX:160832435..160832462,+#_7f894070090dd1d693c5b2774d7cc915 | p@chrX:160832435..160832462, + |
| 2.46e-41 | FFCP PHASE1:Mm9::chrX:160839194..160839217,+#_7f894070090dd1d693c5b2774d7cc915 | p@chrX:160839194..160839217, + |
| 2.46e-41 | FFCP PHASE2:Mm9::chrX:160832435..160832462,+#_7f894070090dd1d693c5b2774d7cc915 | p@chrX:160832435..160832462, + |
| 2.46e-41 | FFCP PHASE2:Mm9::chrX:160839194..160839217,+#_7f894070090dd1d693c5b2774d7cc915 | p@chrX:160839194..160839217, + |
| 4.98e-41 | FFCP PHASE2:Mm9::chr6:91220024..91220048,+#_c8553b0d22e7bc9523b1eba41a03065a | p@chr6:91220024..91220048, + |
| 4.98e-41 | FFCP PHASE1:Mm9::chr6:91220024..91220048,+#_c8553b0d22e7bc9523b1eba41a03065a | p@chr6:91220024..91220048, + |
| 3.93e-40 | FFCP PHASE2:Mm9::chr9:102622418..102622429,+#_d7ec30a66bd33dbb2cd65a4911a24bad | p10@Amotl2 |
| 3.93e-40 | FFCP PHASE1:Mm9::chr9:102622418..102622429,+#_d7ec30a66bd33dbb2cd65a4911a24bad | p10@Amotl2 |
| 4.96e-40 | FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_f7947951dad875b15273f6abaa59c35f | p8@ARHGAP22 |
| 4.96e-40 | FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_f7947951dad875b15273f6abaa59c35f | p8@ARHGAP22 |
| 7.49e-40 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_635a6a23313180fbed750ff5d5fa48e7 | p2@LRRC17 |
| 7.49e-40 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_635a6a23313180fbed750ff5d5fa48e7 | p2@LRRC17 |
| 1.92e-39 | FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_5ec92b8bbbc2013b5cec40fb147f786c | p10@Gpr39 |
| 1.92e-39 | FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_5ec92b8bbbc2013b5cec40fb147f786c | p10@Gpr39 |
| 3.01e-39 | FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_7812f080945ea2aa8c373280d2b26822 | p@chrX:160839663..160839673, + |
| 3.01e-39 | FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_7812f080945ea2aa8c373280d2b26822 | p@chrX:160839663..160839673, + |
