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{{CL
{{CL
|id=CL:0002262
|alt_id=CL:1000403
|name=endothelial cell of sinusoid
|namespace=cell
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|xref=FMA:63134
|is_a=CL:0000115
|synonym=
|comment=
|comment=
|alt_id=CL:1000403
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-09-14T10:57:26Z
|def="An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002262
|is_a=CL:0000115
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=endothelial cell of sinusoid
|namespace=FANTOM
|obo_creation_date=2010-09-14T10:57:26Z
|part_of=UBERON:0003909
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:63134
}}
}}

Latest revision as of 16:41, 12 September 2014

Name:endothelial cell of sinusoid
Namespace:FANTOM
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_f7085926695310bcdd36d5f7658fb7b6p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_f7085926695310bcdd36d5f7658fb7b6p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_f7085926695310bcdd36d5f7658fb7b6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_f7085926695310bcdd36d5f7658fb7b6p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_f7085926695310bcdd36d5f7658fb7b6p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_f7085926695310bcdd36d5f7658fb7b6p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_f7085926695310bcdd36d5f7658fb7b6p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_f7085926695310bcdd36d5f7658fb7b6p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_f7085926695310bcdd36d5f7658fb7b6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_f7085926695310bcdd36d5f7658fb7b6p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_f7085926695310bcdd36d5f7658fb7b6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_f7085926695310bcdd36d5f7658fb7b6p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_f7085926695310bcdd36d5f7658fb7b6p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_f7085926695310bcdd36d5f7658fb7b6p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:75375903..75375931, +

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