UBERON:0006234: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006234 | |||
|is_a=UBERON:0005254 ;;UBERON:0010882 ;;UBERON:0010886 ;;UBERON:0015052 ;;UBERON:0017650 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=femur pre-cartilage condensation | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=emapa_ehdaa2 | ||
| | |synonym= | ||
|union_of= | |||
|xref=EHDAA2:0000508;;EMAPA:17502;;VHOG:0000951 | |||
}} | }} | ||
Latest revision as of 17:56, 12 September 2014
| Name: | femur pre-cartilage condensation | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Subset: | emapa_ehdaa2 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005254(upper leg mesenchyme),UBERON:0010882(limb bone pre-cartilage condensation),UBERON:0010886(hindlimb bone pre-cartilage condensation),UBERON:0015052(femur endochondral element),UBERON:0017650(developing mesenchymal structure) |
|---|
Children
| develops from: | UBERON:0010129 (femur cartilage element) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006234 (femur pre-cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_1f9262929ec92a10d717dfb5b0dcacd7 | p26@Myo18a |
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_1f9262929ec92a10d717dfb5b0dcacd7 | p26@Myo18a |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_78b00943d9bb051ce79e2f23466806f9 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_78b00943d9bb051ce79e2f23466806f9 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_78b00943d9bb051ce79e2f23466806f9 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_78b00943d9bb051ce79e2f23466806f9 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_78b00943d9bb051ce79e2f23466806f9 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_78b00943d9bb051ce79e2f23466806f9 | p@chr2:32482372..32482381, + |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_1ceb806985e2baea5b9d6d8b687caa8e | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_1ceb806985e2baea5b9d6d8b687caa8e | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_93119401d72a12fae0ed931b0369e58d | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_93119401d72a12fae0ed931b0369e58d | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_78e0a4173da466b31279fa45b7a5b21c | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_78e0a4173da466b31279fa45b7a5b21c | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_78e0a4173da466b31279fa45b7a5b21c | p@chr16:24096441..24096449, + |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_7d6ec50e4a98486c5e1e7bbecded01dc | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_7d6ec50e4a98486c5e1e7bbecded01dc | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_8ec348d66616e88718ee610549133947 | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_8ec348d66616e88718ee610549133947 | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_181296ca0156ea945abf8b9a8ada9e54 | p3@Asb16 |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_181296ca0156ea945abf8b9a8ada9e54 | p3@Asb16 |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_ea0b2e6cff40695f4a93df1b8fbcbb5a | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_ea0b2e6cff40695f4a93df1b8fbcbb5a | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_627c12a3f26417a45a15e5fd8377193a | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_627c12a3f26417a45a15e5fd8377193a | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_d1f33180aa2e7d997b87ba545cf4dffd | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_d1f33180aa2e7d997b87ba545cf4dffd | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_4df9e3b4b56cee2fd84767b9cc8b075f | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_4df9e3b4b56cee2fd84767b9cc8b075f | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_58929b2a845dd8abbf00ef3fa488ea1f | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_58929b2a845dd8abbf00ef3fa488ea1f | p2@Oscar |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_58929b2a845dd8abbf00ef3fa488ea1f | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_58929b2a845dd8abbf00ef3fa488ea1f | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_aab6feaf9ef534072d9f8b4e776ba5a7 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_aab6feaf9ef534072d9f8b4e776ba5a7 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_aab6feaf9ef534072d9f8b4e776ba5a7 | p4@Lipc |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_aab6feaf9ef534072d9f8b4e776ba5a7 | p4@Lipc |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_061474a66de462c13fa60e96554ff134 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_061474a66de462c13fa60e96554ff134 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_9ee36d7368ab45440c8502fd3ec619cc | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_9ee36d7368ab45440c8502fd3ec619cc | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_9ee36d7368ab45440c8502fd3ec619cc | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_9ee36d7368ab45440c8502fd3ec619cc | p@chr8:126415826..126415839, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_9baac06815f78f3cf1f43558664af9be | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_9baac06815f78f3cf1f43558664af9be | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_37f5d5e3c0b659ff155e67c37b6d8ff1 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_37f5d5e3c0b659ff155e67c37b6d8ff1 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_37f5d5e3c0b659ff155e67c37b6d8ff1 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_37f5d5e3c0b659ff155e67c37b6d8ff1 | p@chr15:58649683..58649688, - |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_593cae70df4066ca5aa1386c8fa7cd04 | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_593cae70df4066ca5aa1386c8fa7cd04 | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_2493adab6f1e8a4f6b396c94d548fd6e | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_2493adab6f1e8a4f6b396c94d548fd6e | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_a4cf6380e4116418fa6f468fdebec80b | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_a4cf6380e4116418fa6f468fdebec80b | p2@Myh4 |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_0d2460828b509f9406d252b0df0e88a6 | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_0d2460828b509f9406d252b0df0e88a6 | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_dcaef14d48d33c305eb6e403071ae94b | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_dcaef14d48d33c305eb6e403071ae94b | p1@Msmp |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_dcaef14d48d33c305eb6e403071ae94b | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_dcaef14d48d33c305eb6e403071ae94b | p1@Msmp |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_8a2680b1dbe76f0ce447c8a3d7a008d6 | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_8a2680b1dbe76f0ce447c8a3d7a008d6 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_8a2680b1dbe76f0ce447c8a3d7a008d6 | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_8a2680b1dbe76f0ce447c8a3d7a008d6 | p@chrY:2858251..2858257, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_f759088aae97837eceddc1dc266127ae | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_f759088aae97837eceddc1dc266127ae | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_f9d75d112a1922652ef03fedba057e4c | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_f9d75d112a1922652ef03fedba057e4c | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_463ce83bcf13e61e41a9e554d3149996 | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_463ce83bcf13e61e41a9e554d3149996 | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_ea79b9c10423e8e511c0d08c4c940605 | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_ea79b9c10423e8e511c0d08c4c940605 | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_43d3b663c54a309ad2dcc26c6f337cb9 | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_43d3b663c54a309ad2dcc26c6f337cb9 | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_a03e30b4ba8a96872d7dc2e1fd93831c | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_a03e30b4ba8a96872d7dc2e1fd93831c | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_3ec2e1da6f460e39505937e0b2ab36af | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_3ec2e1da6f460e39505937e0b2ab36af | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_3ec2e1da6f460e39505937e0b2ab36af | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_3ec2e1da6f460e39505937e0b2ab36af | p@chr7:133592162..133592188, - |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_4064090e8fb4651f4db53efc64fe81ff | p4@Sgca |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_4064090e8fb4651f4db53efc64fe81ff | p4@Sgca |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_6cb0d99fb543f980c61fbb4adb1b149a | p1@Mepe |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_6cb0d99fb543f980c61fbb4adb1b149a | p1@Mepe |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_8a4240af2c3bc5a28fb09c1ca8c90149 | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_8a4240af2c3bc5a28fb09c1ca8c90149 | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_8a4240af2c3bc5a28fb09c1ca8c90149 | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_8a4240af2c3bc5a28fb09c1ca8c90149 | p2@Tm4sf19 |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_b6e1404c91a8991958b8a369f68d142f | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_b6e1404c91a8991958b8a369f68d142f | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_b6e1404c91a8991958b8a369f68d142f | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_b6e1404c91a8991958b8a369f68d142f | p5@Col11a2 |
| 1.36e-25 | FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_16c04058008bb7d230e3f03bfc5b0364 | p2@Siglec15 |
| 1.36e-25 | FFCP PHASE2:Mm9::chr18:78254174..78254185,-#_16c04058008bb7d230e3f03bfc5b0364 | p2@Siglec15 |
