FFCP PHASE1:Hg19::chr10:105849667..105849685,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105849667..105849685,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:105849667..105849685,+ | |description=CAGE_peak_at_chr10:105849667..105849685,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!7.12e-90!42;CL:0000860!1.23e-83!45;CL:0002194!1.09e-57!63;CL:0000576!1.09e-57!63;CL:0000040!1.09e-57!63;CL:0000559!1.09e-57!63;CL:0002009!7.94e-56!65;CL:0000839!1.26e-51!70;CL:0000557!7.41e-51!71;CL:0000766!2.64e-47!76;CL:0002087!1.00e-31!119;CL:0000763!5.40e-31!112;CL:0000049!5.40e-31!112;CL:0002031!2.69e-30!124;CL:0000738!2.11e-26!140;CL:0002032!8.21e-22!165;CL:0000837!8.21e-22!165;CL:0000037!9.18e-21!172;CL:0000566!9.18e-21!172;CL:0000988!2.10e-19!182;CL:0002336!2.22e-08!1;CL:0002261!2.22e-08!1;CL:0002170!2.22e-08!1;CL:0002393!6.69e-08!9;CL:0002397!6.69e-08!9;CL:0000134!8.38e-08!358;CL:0002320!1.43e-07!365;CL:0000723!3.20e-07!436;CL:0000034!5.22e-07!444;CL:0000219!9.53e-07!390 | |ontology_enrichment_celltype=CL:0002057!7.12e-90!42;CL:0000860!1.23e-83!45;CL:0002194!1.09e-57!63;CL:0000576!1.09e-57!63;CL:0000040!1.09e-57!63;CL:0000559!1.09e-57!63;CL:0002009!7.94e-56!65;CL:0000839!1.26e-51!70;CL:0000557!7.41e-51!71;CL:0000766!2.64e-47!76;CL:0002087!1.00e-31!119;CL:0000763!5.40e-31!112;CL:0000049!5.40e-31!112;CL:0002031!2.69e-30!124;CL:0000738!2.11e-26!140;CL:0002032!8.21e-22!165;CL:0000837!8.21e-22!165;CL:0000037!9.18e-21!172;CL:0000566!9.18e-21!172;CL:0000988!2.10e-19!182;CL:0002336!2.22e-08!1;CL:0002261!2.22e-08!1;CL:0002170!2.22e-08!1;CL:0002393!6.69e-08!9;CL:0002397!6.69e-08!9;CL:0000134!8.38e-08!358;CL:0002320!1.43e-07!365;CL:0000723!3.20e-07!436;CL:0000034!5.22e-07!444;CL:0000219!9.53e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-60;33!CL:0002057;2.21e-60;33!CL:0000473;2.92e-41;39!CL:0000234;2.92e-41;39!CL:0000576;1.59e-28;48!CL:0000766;3.41e-18;69!CL:0002087;7.42e-14;104!CL:0000763;2.70e-11;100!CL:0000047;8.60e-08;2!CL:0000738;9.71e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.21e-60;33!CL:0002057;2.21e-60;33!CL:0000473;2.92e-41;39!CL:0000234;2.92e-41;39!CL:0000576;1.59e-28;48!CL:0000766;3.41e-18;69!CL:0002087;7.42e-14;104!CL:0000763;2.70e-11;100!CL:0000047;8.60e-08;2!CL:0000738;9.71e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-60,42;CL:0002057,3.46e-60,42;CL:0000473,1.63e-52,48;CL:0000234,1.63e-52,48;CL:0002194,9.19e-42,59;CL:0000576,9.19e-42,59;CL:0000040,9.19e-42,59;CL:0000559,9.19e-42,59;CL:0002009,2.25e-40,61;CL:0000839,2.89e-37,66;CL:0000557,1.07e-36,67;CL:0000766,4.27e-34,72;CL:0000763,2.21e-22,108;CL:0000049,2.21e-22,108;CL:0002087,6.05e-21,115;CL:0002031,5.10e-20,120;CL:0000738,1.65e-17,136;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0000037,6.61e-14,168;CL:0000988,4.00e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-39;42!CL:0000049;6.98e-07;108 | |ontology_enrichment_development_v019=CL:0002057;2.80e-39;42!CL:0000049;6.98e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.86e-45!80;UBERON:0001474!2.00e-41!86;UBERON:0004765!9.25e-35!101;UBERON:0001434!9.25e-35!101;UBERON:0002390!2.20e-34!102;UBERON:0003061!2.20e-34!102;UBERON:0002193!5.40e-31!112;UBERON:0002405!4.32e-30!115;UBERON:0002204!1.54e-19!167;UBERON:0003081!3.31e-14!216;UBERON:0002384!2.98e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!8.86e-45!80;UBERON:0001474!2.00e-41!86;UBERON:0004765!9.25e-35!101;UBERON:0001434!9.25e-35!101;UBERON:0002390!2.20e-34!102;UBERON:0003061!2.20e-34!102;UBERON:0002193!5.40e-31!112;UBERON:0002405!4.32e-30!115;UBERON:0002204!1.54e-19!167;UBERON:0003081!3.31e-14!216;UBERON:0002384!2.98e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-32,76;UBERON:0001474,7.93e-30,82;UBERON:0004765,4.38e-27,90;UBERON:0002405,3.54e-26,93;UBERON:0002390,8.75e-25,98;UBERON:0003061,8.75e-25,98;UBERON:0001434,2.89e-24,100;UBERON:0002193,2.21e-22,108;UBERON:0002204,5.35e-14,167;UBERON:0003081,3.01e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32397245119126,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.256160706529101,1.6553756092201,2.06847408441971,5.16387746867061,9.47985406160392,0,0,0.674170453335254,2.44867113896722,3.85114832491312,3.19668562899521,0,0,0,6.67481248845743,10.2129340444405,10.5879782329248,0,0,0.217188844705117,1.81619850790011,11.0483290796269,14.5572698222807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32397245119126,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,0.256160706529101,1.6553756092201,2.06847408441971,5.16387746867061,9.47985406160392,0,0,0.674170453335254,2.44867113896722,3.85114832491312,3.19668562899521,0,0,0,6.67481248845743,10.2129340444405,10.5879782329248,0,0,0.217188844705117,1.81619850790011,11.0483290796269,14.5572698222807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:105849667..105849685,+ | |short_description=p@chr10:105849667..105849685,+ | ||
}} | }} |
Latest revision as of 10:05, 23 July 2015
Short description: | p@chr10:105849667..105849685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105849667..105849685, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.46e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-60 | 42 |
defensive cell | 1.63e-52 | 48 |
phagocyte | 1.63e-52 | 48 |
monopoietic cell | 9.19e-42 | 59 |
monocyte | 9.19e-42 | 59 |
monoblast | 9.19e-42 | 59 |
promonocyte | 9.19e-42 | 59 |
macrophage dendritic cell progenitor | 2.25e-40 | 61 |
myeloid lineage restricted progenitor cell | 2.89e-37 | 66 |
granulocyte monocyte progenitor cell | 1.07e-36 | 67 |
myeloid leukocyte | 4.27e-34 | 72 |
myeloid cell | 2.21e-22 | 108 |
common myeloid progenitor | 2.21e-22 | 108 |
nongranular leukocyte | 6.05e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 5.10e-20 | 120 |
leukocyte | 1.65e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
hematopoietic stem cell | 6.61e-14 | 168 |
hematopoietic cell | 4.00e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.96e-32 | 76 |
bone element | 7.93e-30 | 82 |
skeletal element | 4.38e-27 | 90 |
immune system | 3.54e-26 | 93 |
hematopoietic system | 8.75e-25 | 98 |
blood island | 8.75e-25 | 98 |
skeletal system | 2.89e-24 | 100 |
hemolymphoid system | 2.21e-22 | 108 |
musculoskeletal system | 5.35e-14 | 167 |
lateral plate mesoderm | 3.01e-11 | 203 |