FFCP PHASE1:Hg19::chr10:114939013..114939024,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:114939013..114939024,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:114939013..114939024,- | |description=CAGE_peak_at_chr10:114939013..114939024,- | ||
|id=chr10:114939013..114939024,- | |id=chr10:114939013..114939024,- | ||
|ontology_enrichment_celltype=CL:0000860;3.83e-31;33!CL:0002057;3.83e-31;33!CL:0002393;5.06e-27;6!CL:0002397;5.06e-27;6!CL:0000576;4.15e-26;48!CL:0000473;4.37e-23;39!CL:0000234;4.37e-23;39!CL:0000766;2.77e-22;69!CL:0002087;4.38e-14;104!CL:0000226;5.76e-14;3!CL:0000842;5.76e-14;3!CL:0000763;3.43e-09;100!CL:0000738;9.83e-07;136 | |ontology_enrichment_celltype=CL:0002057!1.94e-98!42;CL:0000860!1.93e-91!45;CL:0002194!9.76e-67!63;CL:0000576!9.76e-67!63;CL:0000040!9.76e-67!63;CL:0000559!9.76e-67!63;CL:0000766!3.58e-66!76;CL:0002009!1.64e-64!65;CL:0000839!1.70e-59!70;CL:0000557!1.41e-58!71;CL:0000763!7.79e-43!112;CL:0000049!7.79e-43!112;CL:0002087!1.42e-42!119;CL:0002393!1.67e-42!9;CL:0002397!1.67e-42!9;CL:0000738!2.07e-42!140;CL:0002031!1.97e-35!124;CL:0000037!3.49e-33!172;CL:0000566!3.49e-33!172;CL:0000988!5.84e-31!182;CL:0002032!1.20e-30!165;CL:0000837!1.20e-30!165;CL:0000875!5.43e-15!3;CL:0002396!5.43e-15!3;CL:0000767!7.60e-15!3;CL:0000134!4.93e-12!358;CL:0002320!1.18e-11!365;CL:0000219!2.55e-10!390;CL:0000034!5.44e-09!444;CL:0000048!1.01e-08!430;CL:0000723!1.71e-08!436;CL:0000842!1.54e-07!3;CL:0000623!6.20e-07!3;CL:0000825!6.20e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.83e-31;33!CL:0002057;3.83e-31;33!CL:0002393;5.06e-27;6!CL:0002397;5.06e-27;6!CL:0000576;4.15e-26;48!CL:0000473;4.37e-23;39!CL:0000234;4.37e-23;39!CL:0000766;2.77e-22;69!CL:0002087;4.38e-14;104!CL:0000226;5.76e-14;3!CL:0000842;5.76e-14;3!CL:0000763;3.43e-09;100!CL:0000738;9.83e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-58,42;CL:0002057,1.19e-58,42;CL:0000473,4.75e-51,48;CL:0000234,4.75e-51,48;CL:0002194,2.12e-40,59;CL:0000576,2.12e-40,59;CL:0000040,2.12e-40,59;CL:0000559,2.12e-40,59;CL:0002009,5.04e-39,61;CL:0000766,3.88e-37,72;CL:0000839,6.05e-36,66;CL:0000557,2.21e-35,67;CL:0002393,1.09e-27,9;CL:0002397,1.09e-27,9;CL:0002087,2.08e-25,115;CL:0000763,4.39e-24,108;CL:0000049,4.39e-24,108;CL:0000738,9.85e-24,136;CL:0002031,7.30e-19,120;CL:0000037,9.47e-19,168;CL:0000988,1.14e-17,177;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000226,5.77e-14,3;CL:0000842,5.77e-14,3;CL:0000134,1.79e-07,354;CL:0002320,2.85e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-39;42!CL:0000049;1.39e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.55e-51!80;UBERON:0001474!2.58e-47!86;UBERON:0002390!8.52e-45!102;UBERON:0003061!8.52e-45!102;UBERON:0002193!3.28e-40!112;UBERON:0004765!2.31e-39!101;UBERON:0001434!2.31e-39!101;UBERON:0002405!8.55e-34!115;UBERON:0002204!3.13e-21!167;UBERON:0003081!1.50e-17!216;UBERON:0002384!3.87e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.56e-31,76;UBERON:0002390,3.40e-30,98;UBERON:0003061,3.40e-30,98;UBERON:0001474,1.41e-28,82;UBERON:0002193,3.37e-27,108;UBERON:0004765,7.35e-26,90;UBERON:0002405,5.83e-25,93;UBERON:0001434,4.55e-23,100;UBERON:0003081,2.47e-13,203;UBERON:0002204,6.66e-13,167;UBERON:0000926,1.24e-07,315;UBERON:0004120,1.24e-07,315;UBERON:0006603,1.24e-07,315;UBERON:0002384,5.36e-07,371 | |||
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|short_description=p@chr10:114939013..114939024,- | |short_description=p@chr10:114939013..114939024,- | ||
}} | }} |
Latest revision as of 10:34, 23 July 2015
Short description: | p@chr10:114939013..114939024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:114939013..114939024, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-58 | 42 |
defensive cell | 4.75e-51 | 48 |
phagocyte | 4.75e-51 | 48 |
monopoietic cell | 2.12e-40 | 59 |
monocyte | 2.12e-40 | 59 |
monoblast | 2.12e-40 | 59 |
promonocyte | 2.12e-40 | 59 |
macrophage dendritic cell progenitor | 5.04e-39 | 61 |
myeloid leukocyte | 3.88e-37 | 72 |
myeloid lineage restricted progenitor cell | 6.05e-36 | 66 |
granulocyte monocyte progenitor cell | 2.21e-35 | 67 |
intermediate monocyte | 1.09e-27 | 9 |
CD14-positive, CD16-positive monocyte | 1.09e-27 | 9 |
nongranular leukocyte | 2.08e-25 | 115 |
myeloid cell | 4.39e-24 | 108 |
common myeloid progenitor | 4.39e-24 | 108 |
leukocyte | 9.85e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 7.30e-19 | 120 |
hematopoietic stem cell | 9.47e-19 | 168 |
hematopoietic cell | 1.14e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.17e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-15 | 161 |
single nucleate cell | 5.77e-14 | 3 |
mononuclear cell | 5.77e-14 | 3 |
mesenchymal cell | 1.79e-07 | 354 |
connective tissue cell | 2.85e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.56e-31 | 76 |
hematopoietic system | 3.40e-30 | 98 |
blood island | 3.40e-30 | 98 |
bone element | 1.41e-28 | 82 |
hemolymphoid system | 3.37e-27 | 108 |
skeletal element | 7.35e-26 | 90 |
immune system | 5.83e-25 | 93 |
skeletal system | 4.55e-23 | 100 |
lateral plate mesoderm | 2.47e-13 | 203 |
musculoskeletal system | 6.66e-13 | 167 |
mesoderm | 1.24e-07 | 315 |
mesoderm-derived structure | 1.24e-07 | 315 |
presumptive mesoderm | 1.24e-07 | 315 |
connective tissue | 5.36e-07 | 371 |