FFCP PHASE1:Hg19::chr10:129788795..129788827,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:129788795..129788827,+ to FFCP PHASE1:Hg19::chr10:129788795..129788827,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:129788795..129788827,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:129788795..129788827,+ | |||
|id=chr10:129788795..129788827,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.39e-44!42;CL:0000860!5.71e-41!45;CL:0000766!7.63e-33!76;CL:0002194!6.81e-30!63;CL:0000576!6.81e-30!63;CL:0000040!6.81e-30!63;CL:0000559!6.81e-30!63;CL:0000839!7.08e-30!70;CL:0000557!2.57e-29!71;CL:0002009!1.09e-28!65;CL:0000738!2.61e-28!140;CL:0002087!2.14e-24!119;CL:0002031!1.16e-21!124;CL:0000037!1.46e-21!172;CL:0000566!1.46e-21!172;CL:0000763!4.11e-20!112;CL:0000049!4.11e-20!112;CL:0000988!1.29e-19!182;CL:0002032!1.80e-17!165;CL:0000837!1.80e-17!165;CL:0000134!8.46e-11!358;CL:0002320!2.73e-10!365;CL:0002543!5.10e-09!6;CL:0000219!5.12e-09!390;CL:0000063!5.87e-09!578;CL:0000071!2.77e-08!18;CL:0002546!2.77e-08!18;CL:0000767!3.11e-08!3;CL:0000623!8.09e-08!3;CL:0000825!8.09e-08!3;CL:0000784!2.04e-07!3;CL:0000842!2.61e-07!3;CL:0002139!3.66e-07!24;CL:0000034!3.94e-07!444;CL:0000048!6.64e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-58;33!CL:0002057;1.42e-58;33!CL:0000473;2.58e-41;39!CL:0000234;2.58e-41;39!CL:0000576;7.32e-36;48!CL:0000766;3.73e-24;69!CL:0000767;2.07e-19;3!CL:0002087;3.07e-14;104!CL:0000763;1.17e-11;100!CL:0002393;2.07e-10;6!CL:0002397;2.07e-10;6!CL:0000623;5.57e-09;3!CL:0000094;1.35e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.09e-69,42;CL:0002057,3.09e-69,42;CL:0000473,4.85e-60,48;CL:0000234,4.85e-60,48;CL:0000766,9.44e-50,72;CL:0002194,3.69e-47,59;CL:0000576,3.69e-47,59;CL:0000040,3.69e-47,59;CL:0000559,3.69e-47,59;CL:0002009,1.70e-45,61;CL:0000839,8.97e-42,66;CL:0000557,4.28e-41,67;CL:0000763,9.84e-32,108;CL:0000049,9.84e-32,108;CL:0000738,9.89e-29,136;CL:0002087,7.35e-27,115;CL:0002031,1.49e-25,120;CL:0002032,1.63e-23,161;CL:0000837,1.63e-23,161;CL:0000037,2.51e-22,168;CL:0000988,6.12e-21,177;CL:0000767,2.58e-19,3;CL:0000134,1.11e-10,354;CL:0002320,2.30e-10,361;CL:0000219,2.94e-09,386;CL:0000623,6.84e-09,3;CL:0000825,6.84e-09,3;CL:0000034,2.71e-08,441;CL:0000048,6.71e-08,427;CL:0000723,1.03e-07,433;CL:0000094,1.46e-07,8;CL:0002393,4.45e-07,9;CL:0002397,4.45e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-47;42!CL:0000049;8.99e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.26e-26!80;UBERON:0001474!4.57e-24!86;UBERON:0002390!7.16e-23!102;UBERON:0003061!7.16e-23!102;UBERON:0002193!3.68e-21!112;UBERON:0004765!2.61e-20!101;UBERON:0001434!2.61e-20!101;UBERON:0002405!9.81e-18!115;UBERON:0003081!2.31e-13!216;UBERON:0002384!3.64e-10!375;UBERON:0002204!1.61e-08!167;UBERON:0001986!2.77e-08!18;UBERON:0004638!2.77e-08!18;UBERON:0004852!2.77e-08!18;UBERON:0006914!8.94e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.92e-36,76;UBERON:0001474,7.19e-33,82;UBERON:0004765,1.37e-29,90;UBERON:0002405,1.67e-28,93;UBERON:0002390,7.71e-27,98;UBERON:0003061,7.71e-27,98;UBERON:0001434,3.21e-26,100;UBERON:0002193,5.74e-24,108;UBERON:0002204,5.62e-14,167;UBERON:0003081,6.11e-12,203;UBERON:0002384,6.16e-10,371;UBERON:0000926,1.14e-07,315;UBERON:0004120,1.14e-07,315;UBERON:0006603,1.14e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,2.68680578668049,2.01260960310899,0,0,0,0,0,0,9.41792194504192,5.41470008169383,3.47217393145363,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,2.47765096716083,4.60307827715441,1.7931249457037,8.98632473576624,2.75796544589295,3.22742341791913,14.8969135253776,0.188242339542605,0.545812300115692,2.02251136000576,4.89734227793444,5.45579346029359,5.11469700639233,0,0,0,4.93355705668593,0.56738522469114,3.73693349397345,1.50749199154046,3.65038042894141,6.08128765174327,1.81619850790011,3.68277635987565,4.1140110367315,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0,0,1.22061219961398,1.81848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,2.68680578668049,2.01260960310899,0,0,0,0,0,0,9.41792194504192,5.41470008169383,3.47217393145363,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,2.47765096716083,4.60307827715441,1.7931249457037,8.98632473576624,2.75796544589295,3.22742341791913,14.8969135253776,0.188242339542605,0.545812300115692,2.02251136000576,4.89734227793444,5.45579346029359,5.11469700639233,0,0,0,4.93355705668593,0.56738522469114,3.73693349397345,1.50749199154046,3.65038042894141,6.08128765174327,1.81619850790011,3.68277635987565,4.1140110367315,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0,0,1.22061219961398,1.81848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:129788795..129788827,+ | |||
}} | }} |
Latest revision as of 11:36, 23 July 2015
Short description: | p@chr10:129788795..129788827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129788795..129788827, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.92e-36 | 76 |
bone element | 7.19e-33 | 82 |
skeletal element | 1.37e-29 | 90 |
immune system | 1.67e-28 | 93 |
hematopoietic system | 7.71e-27 | 98 |
blood island | 7.71e-27 | 98 |
skeletal system | 3.21e-26 | 100 |
hemolymphoid system | 5.74e-24 | 108 |
musculoskeletal system | 5.62e-14 | 167 |
lateral plate mesoderm | 6.11e-12 | 203 |
connective tissue | 6.16e-10 | 371 |
mesoderm | 1.14e-07 | 315 |
mesoderm-derived structure | 1.14e-07 | 315 |
presumptive mesoderm | 1.14e-07 | 315 |