FFCP PHASE1:Hg19::chr10:134479770..134479788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134479770..134479788,+ | |||
|description=CAGE_peak_at_chr10:134479770..134479788,+ | |description=CAGE_peak_at_chr10:134479770..134479788,+ | ||
|id=chr10:134479770..134479788,+ | |id=chr10:134479770..134479788,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.98e-22!42;CL:0000860!1.22e-19!45;CL:0002194!1.25e-11!63;CL:0000576!1.25e-11!63;CL:0000040!1.25e-11!63;CL:0000559!1.25e-11!63;CL:0002009!5.82e-11!65;CL:0000766!9.00e-11!76;CL:0000839!3.57e-10!70;CL:0000557!6.86e-10!71;CL:0002368!4.70e-09!13;CL:0000548!2.38e-08!679;CL:0000004!2.38e-08!679;CL:0000255!2.38e-08!679;CL:0000012!4.14e-08!682 | |ontology_enrichment_celltype=CL:0002057!6.98e-22!42;CL:0000860!1.22e-19!45;CL:0002194!1.25e-11!63;CL:0000576!1.25e-11!63;CL:0000040!1.25e-11!63;CL:0000559!1.25e-11!63;CL:0002009!5.82e-11!65;CL:0000766!9.00e-11!76;CL:0000839!3.57e-10!70;CL:0000557!6.86e-10!71;CL:0002368!4.70e-09!13;CL:0000548!2.38e-08!679;CL:0000004!2.38e-08!679;CL:0000255!2.38e-08!679;CL:0000012!4.14e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.69e-43;33!CL:0002057;8.69e-43;33!CL:0000473;5.07e-29;39!CL:0000234;5.07e-29;39!CL:0000576;1.72e-21;48!CL:0002368;4.88e-17;13!CL:0000766;4.45e-10;69!CL:0002554;1.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.61e-39,42;CL:0002057,5.61e-39,42;CL:0000473,2.40e-33,48;CL:0000234,2.40e-33,48;CL:0002194,5.40e-28,59;CL:0000576,5.40e-28,59;CL:0000040,5.40e-28,59;CL:0000559,5.40e-28,59;CL:0002009,6.88e-27,61;CL:0000839,2.04e-24,66;CL:0000557,5.75e-24,67;CL:0000766,6.69e-22,72;CL:0002368,6.14e-17,13;CL:0000763,1.11e-12,108;CL:0000049,1.11e-12,108;CL:0002087,1.45e-11,115;CL:0002031,7.53e-11,120;CL:0000738,6.33e-09,136;CL:0002554,1.10e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.01e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.00e-08!80;UBERON:0001474!6.50e-08!86;UBERON:0002204!2.44e-07!167;UBERON:0004765!3.32e-07!101;UBERON:0001434!3.32e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-22,76;UBERON:0001474,3.07e-22,82;UBERON:0002405,1.96e-20,93;UBERON:0004765,1.06e-19,90;UBERON:0001434,4.23e-17,100;UBERON:0002193,1.09e-16,108;UBERON:0002390,5.94e-16,98;UBERON:0003061,5.94e-16,98;UBERON:0002204,1.34e-08,167 | |||
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| ||
|short_description=p@chr10:134479770..134479788,+ | |short_description=p@chr10:134479770..134479788,+ | ||
}} | }} |
Latest revision as of 11:47, 23 July 2015
Short description: | p@chr10:134479770..134479788, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134479770..134479788, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.61e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.61e-39 | 42 |
defensive cell | 2.40e-33 | 48 |
phagocyte | 2.40e-33 | 48 |
monopoietic cell | 5.40e-28 | 59 |
monocyte | 5.40e-28 | 59 |
monoblast | 5.40e-28 | 59 |
promonocyte | 5.40e-28 | 59 |
macrophage dendritic cell progenitor | 6.88e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.04e-24 | 66 |
granulocyte monocyte progenitor cell | 5.75e-24 | 67 |
myeloid leukocyte | 6.69e-22 | 72 |
respiratory epithelial cell | 6.14e-17 | 13 |
myeloid cell | 1.11e-12 | 108 |
common myeloid progenitor | 1.11e-12 | 108 |
nongranular leukocyte | 1.45e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.53e-11 | 120 |
leukocyte | 6.33e-09 | 136 |
fibroblast of lymphatic vessel | 1.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.56e-22 | 76 |
bone element | 3.07e-22 | 82 |
immune system | 1.96e-20 | 93 |
skeletal element | 1.06e-19 | 90 |
skeletal system | 4.23e-17 | 100 |
hemolymphoid system | 1.09e-16 | 108 |
hematopoietic system | 5.94e-16 | 98 |
blood island | 5.94e-16 | 98 |
musculoskeletal system | 1.34e-08 | 167 |