FFCP PHASE1:Hg19::chr10:21984897..21984901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21984897..21984901,+ | |||
|description=CAGE_peak_at_chr10:21984897..21984901,+ | |description=CAGE_peak_at_chr10:21984897..21984901,+ | ||
|id=chr10:21984897..21984901,+ | |id=chr10:21984897..21984901,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-19!115;UBERON:0001049!4.61e-16!57;UBERON:0005068!4.61e-16!57;UBERON:0006241!4.61e-16!57;UBERON:0007135!4.61e-16!57;UBERON:0000955!4.06e-14!69;UBERON:0006238!4.06e-14!69;UBERON:0002780!2.01e-13!41;UBERON:0001890!2.01e-13!41;UBERON:0006240!2.01e-13!41;UBERON:0002616!8.42e-13!59;UBERON:0003080!1.20e-12!42;UBERON:0002020!1.52e-12!34;UBERON:0003528!1.52e-12!34;UBERON:0001017!2.43e-12!82;UBERON:0002346!2.57e-12!90;UBERON:0001893!3.52e-12!34;UBERON:0002791!6.79e-12!33;UBERON:0001869!2.57e-11!32;UBERON:0005743!2.98e-11!86;UBERON:0000073!8.98e-11!94;UBERON:0001016!8.98e-11!94;UBERON:0003075!9.27e-11!86;UBERON:0007284!9.27e-11!86;UBERON:0000956!1.22e-08!25;UBERON:0000203!1.22e-08!25;UBERON:0001950!2.05e-08!20;UBERON:0002619!9.86e-08!22;UBERON:0000153!3.20e-07!129;UBERON:0007811!3.20e-07!129;UBERON:0003056!4.90e-07!61;UBERON:0000033!9.18e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.72e-08;20!UBERON:0006947;1.07e-07;3!UBERON:0004054;1.07e-07;3!UBERON:0001871;1.50e-07;6!UBERON:0002619;2.17e-07;22!UBERON:0003978;2.85e-07;3!UBERON:0000946;2.85e-07;3!UBERON:0003528;2.98e-07;34!UBERON:0002020;2.98e-07;34!UBERON:0003135;3.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.04e-13,86;UBERON:0001049,1.38e-12,56;UBERON:0005068,1.38e-12,56;UBERON:0006241,1.38e-12,56;UBERON:0007135,1.38e-12,56;UBERON:0007023,4.87e-12,114;UBERON:0000073,5.31e-11,53;UBERON:0002616,5.31e-11,53;UBERON:0003075,1.18e-10,82;UBERON:0007284,1.18e-10,82;UBERON:0000955,1.99e-10,68;UBERON:0006238,1.99e-10,68;UBERON:0001017,1.18e-09,81;UBERON:0001016,6.59e-09,89;UBERON:0003528,9.95e-09,34;UBERON:0002020,9.95e-09,34;UBERON:0001950,2.01e-08,20;UBERON:0002780,2.74e-08,41;UBERON:0001890,2.74e-08,41;UBERON:0003080,2.74e-08,41;UBERON:0006240,2.74e-08,41;UBERON:0006947,6.65e-08,3;UBERON:0004054,6.65e-08,3;UBERON:0010371,7.02e-08,104;UBERON:0001871,8.98e-08,6;UBERON:0002619,1.66e-07,22;UBERON:0003978,3.55e-07,3;UBERON:0009751,3.55e-07,3;UBERON:0000946,3.55e-07,3;UBERON:0002523,3.55e-07,3;UBERON:0005983,3.55e-07,3;UBERON:0002165,3.55e-07,3;UBERON:0002062,3.55e-07,3;UBERON:0007280,3.55e-07,3;UBERON:0003135,3.77e-07,11;UBERON:0002791,5.65e-07,32 | |||
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| ||
|short_description=p@chr10:21984897..21984901,+ | |short_description=p@chr10:21984897..21984901,+ | ||
}} | }} |
Latest revision as of 12:33, 23 July 2015
Short description: | p@chr10:21984897..21984901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21984897..21984901, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.04e-13 | 86 |
neural tube | 1.38e-12 | 56 |
neural rod | 1.38e-12 | 56 |
future spinal cord | 1.38e-12 | 56 |
neural keel | 1.38e-12 | 56 |
adult organism | 4.87e-12 | 114 |
regional part of nervous system | 5.31e-11 | 53 |
regional part of brain | 5.31e-11 | 53 |
neural plate | 1.18e-10 | 82 |
presumptive neural plate | 1.18e-10 | 82 |
brain | 1.99e-10 | 68 |
future brain | 1.99e-10 | 68 |
central nervous system | 1.18e-09 | 81 |
nervous system | 6.59e-09 | 89 |
brain grey matter | 9.95e-09 | 34 |
gray matter | 9.95e-09 | 34 |
neocortex | 2.01e-08 | 20 |
regional part of forebrain | 2.74e-08 | 41 |
forebrain | 2.74e-08 | 41 |
anterior neural tube | 2.74e-08 | 41 |
future forebrain | 2.74e-08 | 41 |
male genital duct | 6.65e-08 | 3 |
internal male genitalia | 6.65e-08 | 3 |
ecto-epithelium | 7.02e-08 | 104 |
temporal lobe | 8.98e-08 | 6 |
regional part of cerebral cortex | 1.66e-07 | 22 |
valve | 3.55e-07 | 3 |
cardiac mesenchyme | 3.55e-07 | 3 |
cardial valve | 3.55e-07 | 3 |
tunica intima | 3.55e-07 | 3 |
heart layer | 3.55e-07 | 3 |
endocardium | 3.55e-07 | 3 |
endocardial cushion | 3.55e-07 | 3 |
presumptive endocardium | 3.55e-07 | 3 |
male reproductive organ | 3.77e-07 | 11 |
regional part of telencephalon | 5.65e-07 | 32 |