FFCP PHASE1:Hg19::chr10:60556194..60556222,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:60556194..60556222,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr10:60556194..60556222,+ | |description=CAGE_peak_at_chr10:60556194..60556222,+ | ||
|id=chr10:60556194..60556222,+ | |id=chr10:60556194..60556222,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.43e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.01e-38!57;UBERON:0005068!2.01e-38!57;UBERON:0006241!2.01e-38!57;UBERON:0007135!2.01e-38!57;UBERON:0002619!3.96e-35!22;UBERON:0002616!1.75e-34!59;UBERON:0000955!2.59e-34!69;UBERON:0006238!2.59e-34!69;UBERON:0001017!4.32e-33!82;UBERON:0005743!2.68e-32!86;UBERON:0001950!3.81e-32!20;UBERON:0002020!1.12e-31!34;UBERON:0003528!1.12e-31!34;UBERON:0001869!1.43e-31!32;UBERON:0002780!1.98e-31!41;UBERON:0001890!1.98e-31!41;UBERON:0006240!1.98e-31!41;UBERON:0000073!1.82e-30!94;UBERON:0001016!1.82e-30!94;UBERON:0003080!1.90e-30!42;UBERON:0000956!3.81e-30!25;UBERON:0000203!3.81e-30!25;UBERON:0001893!3.14e-29!34;UBERON:0002791!1.04e-27!33;UBERON:0003075!7.05e-25!86;UBERON:0007284!7.05e-25!86;UBERON:0002346!3.62e-23!90;UBERON:0007023!2.34e-22!115;UBERON:0003056!3.17e-19!61;UBERON:0000033!6.67e-18!123;UBERON:0000153!2.03e-16!129;UBERON:0007811!2.03e-16!129;UBERON:0004121!3.05e-13!169;UBERON:0000025!3.55e-13!194;UBERON:0000924!1.33e-12!173;UBERON:0006601!1.33e-12!173;UBERON:0000200!2.27e-11!6;UBERON:0001871!7.15e-11!7;UBERON:0000475!1.08e-10!365;UBERON:0002021!7.30e-10!5;UBERON:0001872!8.24e-10!5;UBERON:0004733!1.79e-09!12;UBERON:0002028!1.79e-09!12;UBERON:0007277!1.79e-09!12;UBERON:0000349!2.63e-09!5;UBERON:0003076!4.56e-09!15;UBERON:0003057!4.56e-09!15;UBERON:0004111!4.65e-09!241;UBERON:0000477!8.42e-09!286;UBERON:0004732!1.38e-08!13;UBERON:0000483!2.17e-07!309;UBERON:0000064!2.27e-07!219;UBERON:0000119!3.65e-07!312;UBERON:0002298!3.94e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!2.01e-38!57;UBERON:0005068!2.01e-38!57;UBERON:0006241!2.01e-38!57;UBERON:0007135!2.01e-38!57;UBERON:0002619!3.96e-35!22;UBERON:0002616!1.75e-34!59;UBERON:0000955!2.59e-34!69;UBERON:0006238!2.59e-34!69;UBERON:0001017!4.32e-33!82;UBERON:0005743!2.68e-32!86;UBERON:0001950!3.81e-32!20;UBERON:0002020!1.12e-31!34;UBERON:0003528!1.12e-31!34;UBERON:0001869!1.43e-31!32;UBERON:0002780!1.98e-31!41;UBERON:0001890!1.98e-31!41;UBERON:0006240!1.98e-31!41;UBERON:0000073!1.82e-30!94;UBERON:0001016!1.82e-30!94;UBERON:0003080!1.90e-30!42;UBERON:0000956!3.81e-30!25;UBERON:0000203!3.81e-30!25;UBERON:0001893!3.14e-29!34;UBERON:0002791!1.04e-27!33;UBERON:0003075!7.05e-25!86;UBERON:0007284!7.05e-25!86;UBERON:0002346!3.62e-23!90;UBERON:0007023!2.34e-22!115;UBERON:0003056!3.17e-19!61;UBERON:0000033!6.67e-18!123;UBERON:0000153!2.03e-16!129;UBERON:0007811!2.03e-16!129;UBERON:0004121!3.05e-13!169;UBERON:0000025!3.55e-13!194;UBERON:0000924!1.33e-12!173;UBERON:0006601!1.33e-12!173;UBERON:0000200!2.27e-11!6;UBERON:0001871!7.15e-11!7;UBERON:0000475!1.08e-10!365;UBERON:0002021!7.30e-10!5;UBERON:0001872!8.24e-10!5;UBERON:0004733!1.79e-09!12;UBERON:0002028!1.79e-09!12;UBERON:0007277!1.79e-09!12;UBERON:0000349!2.63e-09!5;UBERON:0003076!4.56e-09!15;UBERON:0003057!4.56e-09!15;UBERON:0004111!4.65e-09!241;UBERON:0000477!8.42e-09!286;UBERON:0004732!1.38e-08!13;UBERON:0000483!2.17e-07!309;UBERON:0000064!2.27e-07!219;UBERON:0000119!3.65e-07!312;UBERON:0002298!3.94e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.47e-102;22!UBERON:0001950;1.03e-100;20!UBERON:0000956;6.94e-90;25!UBERON:0000203;6.94e-90;25!UBERON:0001869;7.10e-77;32!UBERON:0001893;1.64e-69;34!UBERON:0002791;9.83e-69;32!UBERON:0003528;1.15e-65;34!UBERON:0002020;1.15e-65;34!UBERON:0002780;3.59e-55;41!UBERON:0001890;3.59e-55;41!UBERON:0000200;6.98e-40;6!UBERON:0000073;2.22e-37;53!UBERON:0002616;2.22e-37;53!UBERON:0001872;1.87e-33;5!UBERON:0000955;5.21e-32;68!UBERON:0001017;4.61e-26;75!UBERON:0001871;9.80e-24;6!UBERON:0002021;1.20e-22;5!UBERON:0001016;5.17e-21;83!UBERON:0001870;6.00e-21;3!UBERON:0002702;1.62e-14;2!UBERON:0002771;2.61e-14;2!UBERON:0000007;5.64e-14;2!UBERON:0000349;1.12e-12;5!UBERON:0011216;1.43e-10;132!UBERON:0007023;1.69e-08;114!UBERON:0002022;2.19e-08;1!UBERON:0002581;3.57e-08;1!UBERON:0002902;3.57e-08;1!UBERON:0001882;3.57e-08;1!UBERON:0009899;3.57e-08;1!UBERON:0007190;3.57e-08;1!UBERON:0005403;3.57e-08;1!UBERON:0003112;7.85e-08;1!UBERON:0011158;7.85e-08;1!UBERON:0003128;7.85e-08;1!UBERON:0001703;7.85e-08;1!UBERON:0002241;7.85e-08;1!UBERON:0003296;2.00e-07;4!UBERON:0010133;2.00e-07;4!UBERON:0010314;2.27e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.06e-102,22;UBERON:0001950,1.14e-100,20;UBERON:0000956,7.75e-90,25;UBERON:0000203,7.75e-90,25;UBERON:0001869,5.06e-86,32;UBERON:0001893,6.97e-81,34;UBERON:0002780,2.34e-80,41;UBERON:0001890,2.34e-80,41;UBERON:0003080,2.34e-80,41;UBERON:0006240,2.34e-80,41;UBERON:0002791,8.82e-78,32;UBERON:0003528,4.04e-73,34;UBERON:0002020,4.04e-73,34;UBERON:0001049,7.49e-69,56;UBERON:0005068,7.49e-69,56;UBERON:0006241,7.49e-69,56;UBERON:0007135,7.49e-69,56;UBERON:0000073,4.09e-67,53;UBERON:0002616,4.09e-67,53;UBERON:0000955,3.27e-65,68;UBERON:0006238,3.27e-65,68;UBERON:0001017,1.50e-58,81;UBERON:0003056,4.45e-53,61;UBERON:0001016,2.27e-52,89;UBERON:0003075,6.78e-46,82;UBERON:0007284,6.78e-46,82;UBERON:0002346,1.40e-43,86;UBERON:0000200,9.18e-40,6;UBERON:0010371,2.46e-35,104;UBERON:0001872,1.17e-33,5;UBERON:0007023,1.72e-29,114;UBERON:0010314,2.16e-29,132;UBERON:0004121,1.84e-25,171;UBERON:0000924,1.84e-25,171;UBERON:0006601,1.84e-25,171;UBERON:0001871,1.08e-23,6;UBERON:0002021,1.42e-22,5;UBERON:0011216,9.74e-22,223;UBERON:0001870,8.16e-21,3;UBERON:0000025,4.02e-17,192;UBERON:0002702,1.68e-14,2;UBERON:0002771,3.78e-14,2;UBERON:0000007,4.04e-14,2;UBERON:0004111,8.96e-13,240;UBERON:0000349,1.10e-12,5;UBERON:0000483,5.28e-09,306;UBERON:0000119,7.18e-09,309;UBERON:0002022,2.04e-08,1;UBERON:0002581,3.11e-08,1;UBERON:0007190,3.58e-08,1;UBERON:0002902,3.83e-08,1;UBERON:0009899,3.83e-08,1;UBERON:0001882,4.40e-08,1;UBERON:0005403,4.40e-08,1;UBERON:0003112,7.10e-08,1;UBERON:0011158,7.10e-08,1;UBERON:0003128,7.10e-08,1;UBERON:0001703,7.10e-08,1;UBERON:0002241,7.10e-08,1;UBERON:0004761,7.10e-08,1;UBERON:0009617,7.10e-08,1;UBERON:0003296,1.70e-07,4;UBERON:0010133,1.70e-07,4 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,4.84666373047609,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.089256266544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,3.28047605953333,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,3.54427271986794,2.56255156294123,1.3771002377715,1.14681839138014,0.110929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,2.11956442818316,5.6678630530234,0.798169295285756,3.07674546361133,3.27693205088234,2.28218933131919,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29627787702542,3.12431239445539,1.86018116851066,2.15613754659283,1.64092442705466,0,0,0,0,0,0.336283722218824,1.82089681270989,1.59363533945908,0,0,0.171488009437418,0.611727596791485,2.63091094251396,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,2.71965960763659,1.74540276136151,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,4.84666373047609,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,2.089256266544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,3.28047605953333,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,3.54427271986794,2.56255156294123,1.3771002377715,1.14681839138014,0.110929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0.622077260032973,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,2.11956442818316,5.6678630530234,0.798169295285756,3.07674546361133,3.27693205088234,2.28218933131919,1.61475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29627787702542,3.12431239445539,1.86018116851066,2.15613754659283,1.64092442705466,0,0,0,0,0,0.336283722218824,1.82089681270989,1.59363533945908,0,0,0.171488009437418,0.611727596791485,2.63091094251396,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,2.71965960763659,1.74540276136151,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:60556194..60556222,+ | |short_description=p@chr10:60556194..60556222,+ | ||
}} | }} |
Latest revision as of 14:19, 23 July 2015
Short description: | p@chr10:60556194..60556222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:60556194..60556222, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data