FFCP PHASE1:Hg19::chr10:73822528..73822532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73822528..73822532,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_at_chr10:73822528..73822532,- | |description=CAGE_peak_at_chr10:73822528..73822532,- | ||
|id=chr10:73822528..73822532,- | |id=chr10:73822528..73822532,- | ||
|ontology_enrichment_celltype=CL:0000791!1.07e-19!18;CL:0000789!1.07e-19!18;CL:0002420!1.07e-19!18;CL:0002419!1.07e-19!18;CL:0000790!1.07e-19!18;CL:0000084!6.64e-18!25;CL:0000827!6.64e-18!25;CL:0000838!8.35e-11!52;CL:0000625!1.28e-10!11;CL:0000542!1.82e-10!53;CL:0000051!1.82e-10!53;CL:0000624!7.53e-10!6 | |ontology_enrichment_celltype=CL:0000791!1.07e-19!18;CL:0000789!1.07e-19!18;CL:0002420!1.07e-19!18;CL:0002419!1.07e-19!18;CL:0000790!1.07e-19!18;CL:0000084!6.64e-18!25;CL:0000827!6.64e-18!25;CL:0000838!8.35e-11!52;CL:0000625!1.28e-10!11;CL:0000542!1.82e-10!53;CL:0000051!1.82e-10!53;CL:0000624!7.53e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.47e-24;18!CL:0000789;4.47e-24;18!CL:0002419;4.47e-24;18!CL:0000084;2.58e-20;25!CL:0000624;2.58e-19;6!CL:0000623;1.18e-14;3!CL:0000625;1.72e-10;11!CL:0000542;5.65e-09;53!CL:0000898;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.54e-24,18;CL:0000789,4.54e-24,18;CL:0002420,4.54e-24,18;CL:0002419,4.54e-24,18;CL:0000790,4.54e-24,18;CL:0000084,3.33e-20,25;CL:0000827,3.33e-20,25;CL:0000624,1.78e-19,6;CL:0000838,1.17e-16,52;CL:0000542,2.79e-16,53;CL:0000051,2.79e-16,53;CL:0000623,5.48e-15,3;CL:0000825,5.48e-15,3;CL:0000625,2.12e-10,11;CL:0000898,4.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.47e-24;18!CL:0000051;5.65e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.65e-26!115;UBERON:0001049!7.30e-25!57;UBERON:0005068!7.30e-25!57;UBERON:0006241!7.30e-25!57;UBERON:0007135!7.30e-25!57;UBERON:0002616!1.66e-20!59;UBERON:0001017!7.61e-20!82;UBERON:0005743!2.49e-19!86;UBERON:0002780!1.14e-18!41;UBERON:0001890!1.14e-18!41;UBERON:0006240!1.14e-18!41;UBERON:0000955!4.72e-18!69;UBERON:0006238!4.72e-18!69;UBERON:0003080!4.92e-18!42;UBERON:0002020!6.05e-17!34;UBERON:0003528!6.05e-17!34;UBERON:0001893!7.51e-17!34;UBERON:0003075!2.00e-16!86;UBERON:0007284!2.00e-16!86;UBERON:0000073!2.66e-16!94;UBERON:0001016!2.66e-16!94;UBERON:0002791!8.20e-16!33;UBERON:0001869!2.75e-15!32;UBERON:0002346!3.65e-15!90;UBERON:0000956!1.34e-11!25;UBERON:0000203!1.34e-11!25;UBERON:0003056!7.55e-11!61;UBERON:0002619!1.02e-10!22;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0001950!8.60e-09!20;UBERON:0003076!4.96e-08!15;UBERON:0003057!4.96e-08!15;UBERON:0002298!1.16e-07!8;UBERON:0000349!1.36e-07!5;UBERON:0000033!1.87e-07!123;UBERON:0002420!3.40e-07!9;UBERON:0007245!3.40e-07!9;UBERON:0010009!3.40e-07!9;UBERON:0010011!3.40e-07!9;UBERON:0000454!3.40e-07!9;UBERON:0002308!5.49e-07!9;UBERON:0000125!5.49e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.65e-26!115;UBERON:0001049!7.30e-25!57;UBERON:0005068!7.30e-25!57;UBERON:0006241!7.30e-25!57;UBERON:0007135!7.30e-25!57;UBERON:0002616!1.66e-20!59;UBERON:0001017!7.61e-20!82;UBERON:0005743!2.49e-19!86;UBERON:0002780!1.14e-18!41;UBERON:0001890!1.14e-18!41;UBERON:0006240!1.14e-18!41;UBERON:0000955!4.72e-18!69;UBERON:0006238!4.72e-18!69;UBERON:0003080!4.92e-18!42;UBERON:0002020!6.05e-17!34;UBERON:0003528!6.05e-17!34;UBERON:0001893!7.51e-17!34;UBERON:0003075!2.00e-16!86;UBERON:0007284!2.00e-16!86;UBERON:0000073!2.66e-16!94;UBERON:0001016!2.66e-16!94;UBERON:0002791!8.20e-16!33;UBERON:0001869!2.75e-15!32;UBERON:0002346!3.65e-15!90;UBERON:0000956!1.34e-11!25;UBERON:0000203!1.34e-11!25;UBERON:0003056!7.55e-11!61;UBERON:0002619!1.02e-10!22;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0001950!8.60e-09!20;UBERON:0003076!4.96e-08!15;UBERON:0003057!4.96e-08!15;UBERON:0002298!1.16e-07!8;UBERON:0000349!1.36e-07!5;UBERON:0000033!1.87e-07!123;UBERON:0002420!3.40e-07!9;UBERON:0007245!3.40e-07!9;UBERON:0010009!3.40e-07!9;UBERON:0010011!3.40e-07!9;UBERON:0000454!3.40e-07!9;UBERON:0002308!5.49e-07!9;UBERON:0000125!5.49e-07!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:73822528..73822532,- | |short_description=p@chr10:73822528..73822532,- | ||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73822528..73822532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73822528..73822532, - |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.54e-24 | 18 |
alpha-beta T cell | 4.54e-24 | 18 |
immature T cell | 4.54e-24 | 18 |
mature T cell | 4.54e-24 | 18 |
immature alpha-beta T cell | 4.54e-24 | 18 |
T cell | 3.33e-20 | 25 |
pro-T cell | 3.33e-20 | 25 |
CD4-positive, alpha-beta T cell | 1.78e-19 | 6 |
lymphoid lineage restricted progenitor cell | 1.17e-16 | 52 |
lymphocyte | 2.79e-16 | 53 |
common lymphoid progenitor | 2.79e-16 | 53 |
natural killer cell | 5.48e-15 | 3 |
pro-NK cell | 5.48e-15 | 3 |
CD8-positive, alpha-beta T cell | 2.12e-10 | 11 |
naive T cell | 4.26e-07 | 3 |