FFCP PHASE1:Hg19::chr10:80844036..80844053,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80844036..80844053,- | |||
|coexpression_cluster_id=C1557 | |coexpression_cluster_id=C1557 | ||
|description=CAGE_peak_at_chr10:80844036..80844053,- | |description=CAGE_peak_at_chr10:80844036..80844053,- | ||
|id=chr10:80844036..80844053,- | |id=chr10:80844036..80844053,- | ||
|ontology_enrichment_celltype=CL:0000766!1.88e-29!76;CL:0002057!8.47e-27!42;CL:0000860!1.03e-24!45;CL:0000839!3.59e-22!70;CL:0000557!8.69e-22!71;CL:0000763!2.46e-21!112;CL:0000049!2.46e-21!112;CL:0002194!4.73e-18!63;CL:0000576!4.73e-18!63;CL:0000040!4.73e-18!63;CL:0000559!4.73e-18!63;CL:0002009!2.30e-17!65;CL:0002393!9.97e-16!9;CL:0002397!9.97e-16!9;CL:0000738!1.99e-14!140;CL:0000037!7.21e-14!172;CL:0000566!7.21e-14!172;CL:0000988!1.00e-12!182;CL:0002032!2.26e-12!165;CL:0000837!2.26e-12!165;CL:0002031!2.63e-10!124;CL:0000094!9.94e-09!8;CL:0002087!1.48e-08!119;CL:0000134!3.29e-08!358;CL:0002274!3.29e-08!5;CL:0000457!3.29e-08!5;CL:0002191!3.29e-08!5;CL:0000097!3.29e-08!5;CL:0000831!3.29e-08!5;CL:0002028!3.29e-08!5;CL:0002320!6.88e-08!365;CL:0000767!7.91e-07!3;CL:0000219!9.15e-07!390 | |ontology_enrichment_celltype=CL:0000766!1.88e-29!76;CL:0002057!8.47e-27!42;CL:0000860!1.03e-24!45;CL:0000839!3.59e-22!70;CL:0000557!8.69e-22!71;CL:0000763!2.46e-21!112;CL:0000049!2.46e-21!112;CL:0002194!4.73e-18!63;CL:0000576!4.73e-18!63;CL:0000040!4.73e-18!63;CL:0000559!4.73e-18!63;CL:0002009!2.30e-17!65;CL:0002393!9.97e-16!9;CL:0002397!9.97e-16!9;CL:0000738!1.99e-14!140;CL:0000037!7.21e-14!172;CL:0000566!7.21e-14!172;CL:0000988!1.00e-12!182;CL:0002032!2.26e-12!165;CL:0000837!2.26e-12!165;CL:0002031!2.63e-10!124;CL:0000094!9.94e-09!8;CL:0002087!1.48e-08!119;CL:0000134!3.29e-08!358;CL:0002274!3.29e-08!5;CL:0000457!3.29e-08!5;CL:0002191!3.29e-08!5;CL:0000097!3.29e-08!5;CL:0000831!3.29e-08!5;CL:0002028!3.29e-08!5;CL:0002320!6.88e-08!365;CL:0000767!7.91e-07!3;CL:0000219!9.15e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000767;2.34e-25;3!CL:0000094;4.34e-21;8!CL:0000081;1.56e-15;11!CL:0000097;1.56e-15;5!CL:0000771;2.60e-10;2!CL:0000163;4.70e-09;9!CL:0000766;1.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.34e-25,3;CL:0000094,4.50e-21,8;CL:0000766,1.92e-19,72;CL:0000081,1.60e-15,11;CL:0000097,2.02e-15,5;CL:0002028,2.02e-15,5;CL:0000763,7.62e-13,108;CL:0000049,7.62e-13,108;CL:0000771,2.72e-10,2;CL:0000738,4.29e-10,136;CL:0000839,1.56e-09,66;CL:0000557,2.17e-09,67;CL:0000163,5.42e-09,9;CL:0002032,1.97e-08,161;CL:0000837,1.97e-08,161;CL:0000037,4.70e-08,168;CL:0000988,1.30e-07,177;CL:0000860,3.59e-07,42;CL:0002057,3.59e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-08,98;UBERON:0003061,1.37e-08,98;UBERON:0002371,2.85e-08,76;UBERON:0002193,9.19e-08,108;UBERON:0001474,1.17e-07,82;UBERON:0004765,5.78e-07,90;UBERON:0002405,9.81e-07,93 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,0,2.16742572642506,0,0,0,0,0,0.880801318004542,1.66198622559563,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,1.27867425159808,0,0.199463657621632,0,0,0,0.622822248995575,0,0,1.08594422352558,0,0,0.632924774881769,0,0.637812899895131,0.419317291016752,0.336985893439485,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,6.05303804351238,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,0,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,0,2.16742572642506,0,0,0,0,0,0.880801318004542,1.66198622559563,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,1.27867425159808,0,0.199463657621632,0,0,0,0.622822248995575,0,0,1.08594422352558,0,0,0.632924774881769,0,0.637812899895131,0.419317291016752,0.336985893439485,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,6.05303804351238,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,0,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:80844036..80844053,- | |short_description=p@chr10:80844036..80844053,- | ||
}} | }} |
Latest revision as of 15:52, 23 July 2015
Short description: | p@chr10:80844036..80844053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80844036..80844053, - |
Coexpression cluster: | C1557_Basophils_Mast_CD34_CD14_CD133_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.34e-25 | 3 |
granulocyte | 4.50e-21 | 8 |
myeloid leukocyte | 1.92e-19 | 72 |
blood cell | 1.60e-15 | 11 |
mast cell | 2.02e-15 | 5 |
basophil mast progenitor cell | 2.02e-15 | 5 |
myeloid cell | 7.62e-13 | 108 |
common myeloid progenitor | 7.62e-13 | 108 |
eosinophil | 2.72e-10 | 2 |
leukocyte | 4.29e-10 | 136 |
myeloid lineage restricted progenitor cell | 1.56e-09 | 66 |
granulocyte monocyte progenitor cell | 2.17e-09 | 67 |
endocrine cell | 5.42e-09 | 9 |
hematopoietic oligopotent progenitor cell | 1.97e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-08 | 161 |
hematopoietic stem cell | 4.70e-08 | 168 |
hematopoietic cell | 1.30e-07 | 177 |
classical monocyte | 3.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-08 | 98 |
blood island | 1.37e-08 | 98 |
bone marrow | 2.85e-08 | 76 |
hemolymphoid system | 9.19e-08 | 108 |
bone element | 1.17e-07 | 82 |
skeletal element | 5.78e-07 | 90 |
immune system | 9.81e-07 | 93 |