FFCP PHASE1:Hg19::chr10:9060715..9060729,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:9060715..9060729,-
|short_description=p@chr10:9060715..9060729,-
|description=CAGE_peak_at_chr10:9060715..9060729,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:9060715..9060729,- | |||
|description=CAGE_peak_at_chr10:9060715..9060729,- | |||
|id=chr10:9060715..9060729,- | |||
|ontology_enrichment_celltype=CL:0000791!1.52e-37!18;CL:0000789!1.52e-37!18;CL:0002420!1.52e-37!18;CL:0002419!1.52e-37!18;CL:0000790!1.52e-37!18;CL:0000084!4.66e-26!25;CL:0000827!4.66e-26!25;CL:0000624!3.94e-22!6;CL:0000625!1.57e-20!11;CL:0000838!2.64e-16!52;CL:0000542!6.43e-16!53;CL:0000051!6.43e-16!53;CL:0002087!5.21e-15!119;CL:0000898!4.94e-12!3;CL:0000738!8.46e-12!140;CL:0000623!3.73e-11!3;CL:0000825!3.73e-11!3;CL:0000842!5.88e-11!3;CL:0002031!1.26e-10!124;CL:0000815!1.11e-08!2;CL:0000792!1.11e-08!2;CL:0002677!1.11e-08!2;CL:0000037!1.88e-08!172;CL:0000566!1.88e-08!172;CL:0000224!2.50e-08!4;CL:0000988!1.17e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.90e-36;18!CL:0000789;2.90e-36;18!CL:0002419;2.90e-36;18!CL:0000084;6.82e-26;25!CL:0000625;1.33e-23;11!CL:0000624;1.58e-16;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.33e-36,18;CL:0000789,4.33e-36,18;CL:0002420,4.33e-36,18;CL:0002419,4.33e-36,18;CL:0000790,4.33e-36,18;CL:0000084,9.07e-26,25;CL:0000827,9.07e-26,25;CL:0000625,1.76e-23,11;CL:0000624,1.80e-16,6;CL:0000838,6.11e-12,52;CL:0000542,1.07e-11,53;CL:0000051,1.07e-11,53;CL:0000815,9.96e-07,2;CL:0000792,9.96e-07,2;CL:0002677,9.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-36;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.62e-18!15;UBERON:0000179!4.62e-18!15;UBERON:0000463!4.62e-18!15;UBERON:0002193!1.51e-08!112;UBERON:0002390!9.35e-08!102;UBERON:0003061!9.35e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.49e-07;15!UBERON:0000179;7.49e-07;15!UBERON:0000463;7.49e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.64e-07,15;UBERON:0000179,6.64e-07,15;UBERON:0000463,6.64e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,0.393010762749165,1.02800749499755,0,0.651844533267181,0.946895611469467,1.94826728407911,7.5759110681918,2.3568472597987,3.32300841875432,1.62482318259009,0.896639238079726,1.43065282315866,0,0,0,0,0,1.04535523804977,0.453237370790265,0.766440987203842,1.03088233644789,2.02415753615602,2.22995790026868,1.30216690771284,0,1.05402583354441,1.15187950038977,0,0.473554504088034,0,1.00803371612366,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,1.70894156152249,0.238231775457789,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,0.393010762749165,1.02800749499755,0,0.651844533267181,0.946895611469467,1.94826728407911,7.5759110681918,2.3568472597987,3.32300841875432,1.62482318259009,0.896639238079726,1.43065282315866,0,0,0,0,0,1.04535523804977,0.453237370790265,0.766440987203842,1.03088233644789,2.02415753615602,2.22995790026868,1.30216690771284,0,1.05402583354441,1.15187950038977,0,0.473554504088034,0,1.00803371612366,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,1.70894156152249,0.238231775457789,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr10:9060715..9060729,- | |||
}} | }} |
Latest revision as of 16:28, 23 July 2015
Short description: | p@chr10:9060715..9060729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9060715..9060729, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.33e-36 | 18 |
alpha-beta T cell | 4.33e-36 | 18 |
immature T cell | 4.33e-36 | 18 |
mature T cell | 4.33e-36 | 18 |
immature alpha-beta T cell | 4.33e-36 | 18 |
T cell | 9.07e-26 | 25 |
pro-T cell | 9.07e-26 | 25 |
CD8-positive, alpha-beta T cell | 1.76e-23 | 11 |
CD4-positive, alpha-beta T cell | 1.80e-16 | 6 |
lymphoid lineage restricted progenitor cell | 6.11e-12 | 52 |
lymphocyte | 1.07e-11 | 53 |
common lymphoid progenitor | 1.07e-11 | 53 |
regulatory T cell | 9.96e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.96e-07 | 2 |
naive regulatory T cell | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.64e-07 | 15 |
haemolymphatic fluid | 6.64e-07 | 15 |
organism substance | 6.64e-07 | 15 |