FFCP PHASE1:Hg19::chr11:12189607..12189628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12189607..12189628,+ | |||
|description=CAGE_peak_at_chr11:12189607..12189628,+ | |description=CAGE_peak_at_chr11:12189607..12189628,+ | ||
|id=chr11:12189607..12189628,+ | |id=chr11:12189607..12189628,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.33e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.43e-13!69;UBERON:0006238!7.43e-13!69;UBERON:0002616!9.23e-12!59;UBERON:0000956!2.61e-10!25;UBERON:0000203!2.61e-10!25;UBERON:0002619!2.85e-10!22;UBERON:0001869!3.13e-10!32;UBERON:0002780!6.52e-10!41;UBERON:0001890!6.52e-10!41;UBERON:0006240!6.52e-10!41;UBERON:0002020!7.84e-10!34;UBERON:0003528!7.84e-10!34;UBERON:0003080!1.98e-09!42;UBERON:0007023!2.14e-09!115;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0001893!4.20e-09!34;UBERON:0001950!5.64e-09!20;UBERON:0001017!6.86e-09!82;UBERON:0002791!1.01e-08!33;UBERON:0005743!2.95e-08!86;UBERON:0000033!1.25e-07!123;UBERON:0000073!2.76e-07!94;UBERON:0001016!2.76e-07!94;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129 | |ontology_enrichment_uberon=UBERON:0000955!7.43e-13!69;UBERON:0006238!7.43e-13!69;UBERON:0002616!9.23e-12!59;UBERON:0000956!2.61e-10!25;UBERON:0000203!2.61e-10!25;UBERON:0002619!2.85e-10!22;UBERON:0001869!3.13e-10!32;UBERON:0002780!6.52e-10!41;UBERON:0001890!6.52e-10!41;UBERON:0006240!6.52e-10!41;UBERON:0002020!7.84e-10!34;UBERON:0003528!7.84e-10!34;UBERON:0003080!1.98e-09!42;UBERON:0007023!2.14e-09!115;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0001893!4.20e-09!34;UBERON:0001950!5.64e-09!20;UBERON:0001017!6.86e-09!82;UBERON:0002791!1.01e-08!33;UBERON:0005743!2.95e-08!86;UBERON:0000033!1.25e-07!123;UBERON:0000073!2.76e-07!94;UBERON:0001016!2.76e-07!94;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.96e-09;5!UBERON:0002037;1.61e-08;6!UBERON:0001950;4.57e-08;20!UBERON:0002619;2.60e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.58e-09,5;UBERON:0002037,1.40e-08,6;UBERON:0006215,1.40e-08,6;UBERON:0001950,4.32e-08,20;UBERON:0000073,1.48e-07,53;UBERON:0002616,1.48e-07,53;UBERON:0002619,2.48e-07,22;UBERON:0004797,4.37e-07,7;UBERON:0001049,4.61e-07,56;UBERON:0005068,4.61e-07,56;UBERON:0006241,4.61e-07,56;UBERON:0007135,4.61e-07,56 | |||
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| ||
|short_description=p@chr11:12189607..12189628,+ | |short_description=p@chr11:12189607..12189628,+ | ||
}} | }} |
Latest revision as of 19:14, 23 July 2015
Short description: | p@chr11:12189607..12189628, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12189607..12189628, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
right ovary | 1.58e-09 | 5 |
cerebellum | 1.40e-08 | 6 |
rhombic lip | 1.40e-08 | 6 |
neocortex | 4.32e-08 | 20 |
regional part of nervous system | 1.48e-07 | 53 |
regional part of brain | 1.48e-07 | 53 |
regional part of cerebral cortex | 2.48e-07 | 22 |
blood vessel layer | 4.37e-07 | 7 |
neural tube | 4.61e-07 | 56 |
neural rod | 4.61e-07 | 56 |
future spinal cord | 4.61e-07 | 56 |
neural keel | 4.61e-07 | 56 |