FFCP PHASE1:Hg19::chr11:20075419..20075431,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:20075419..20075431,+ | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr11:20075419..20075431,+ | |description=CAGE_peak_at_chr11:20075419..20075431,+ | ||
|id=chr11:20075419..20075431,+ | |id=chr11:20075419..20075431,+ | ||
|ontology_enrichment_celltype=CL:0002623!1.32e-10!3;CL:0002621!1.00e-09!3;CL:0002251!2.24e-08!21;CL:0002327!1.91e-07!4;CL:0000575!2.03e-07!2;CL:0002617!9.27e-07!2 | |ontology_enrichment_celltype=CL:0002623!1.32e-10!3;CL:0002621!1.00e-09!3;CL:0002251!2.24e-08!21;CL:0002327!1.91e-07!4;CL:0000575!2.03e-07!2;CL:0002617!9.27e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.37e-13;2!CL:0002623;1.35e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.55e-13,2;CL:0002623,1.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.37e-13;2!UBERON:0010056;1.37e-13;2 | |||
|ontology_enrichment_disease=DOID:3451!4.52e-07!2;DOID:4159!4.52e-07!2;DOID:0060122!4.52e-07!2 | |ontology_enrichment_disease=DOID:3451!4.52e-07!2;DOID:4159!4.52e-07!2;DOID:0060122!4.52e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!3.83e-16!21;UBERON:0000165!9.58e-14!28;UBERON:0000930!9.58e-14!28;UBERON:0000161!4.96e-12!35;UBERON:0001949!1.00e-09!3;UBERON:0001444!1.17e-09!48;UBERON:0003102!6.13e-09!95;UBERON:0001042!7.14e-08!10;UBERON:0009145!7.14e-08!10;UBERON:0003408!8.25e-08!10;UBERON:0000014!1.20e-07!4;UBERON:0001911!1.91e-07!4;UBERON:0005333!1.91e-07!4;UBERON:0008425!1.91e-07!4;UBERON:0005311!1.91e-07!4;UBERON:0006562!4.07e-07!11;UBERON:0001004!4.76e-07!72 | |ontology_enrichment_uberon=UBERON:0000166!3.83e-16!21;UBERON:0000165!9.58e-14!28;UBERON:0000930!9.58e-14!28;UBERON:0000161!4.96e-12!35;UBERON:0001949!1.00e-09!3;UBERON:0001444!1.17e-09!48;UBERON:0003102!6.13e-09!95;UBERON:0001042!7.14e-08!10;UBERON:0009145!7.14e-08!10;UBERON:0003408!8.25e-08!10;UBERON:0000014!1.20e-07!4;UBERON:0001911!1.91e-07!4;UBERON:0005333!1.91e-07!4;UBERON:0008425!1.91e-07!4;UBERON:0005311!1.91e-07!4;UBERON:0006562!4.07e-07!11;UBERON:0001004!4.76e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.15e-26;1!UBERON:0001961;3.15e-26;1!UBERON:0001744;3.15e-26;1!UBERON:0001042;3.15e-26;1!UBERON:0001735;3.15e-26;1!UBERON:0000165;1.34e-14;28!UBERON:0002370;7.78e-14;2!UBERON:0006562;7.78e-14;2!UBERON:0005058;7.78e-14;2!UBERON:0009113;7.78e-14;2!UBERON:0000161;1.81e-12;19!UBERON:0000166;1.81e-12;19!UBERON:0000153;5.32e-11;54!UBERON:0001723;1.67e-09;3!UBERON:0001033;1.67e-09;3!UBERON:0007811;3.66e-09;52!UBERON:0000033;2.72e-08;50!UBERON:0001444;6.68e-08;48!UBERON:0003343;1.64e-07;4!UBERON:0004785;1.64e-07;4!UBERON:0000964;1.92e-07;4!UBERON:0010409;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.58e-26,1;UBERON:0001961,3.58e-26,1;UBERON:0001744,3.58e-26,1;UBERON:0001735,3.58e-26,1;UBERON:0001042,5.13e-23,10;UBERON:0009145,5.13e-23,10;UBERON:0006562,5.33e-21,11;UBERON:0000166,1.91e-18,22;UBERON:0000153,1.74e-14,62;UBERON:0007811,1.74e-14,62;UBERON:0000165,4.05e-14,29;UBERON:0000930,4.05e-14,29;UBERON:0001444,7.37e-13,49;UBERON:0001557,1.77e-12,19;UBERON:0000161,1.83e-11,36;UBERON:0000033,2.77e-11,56;UBERON:0003408,5.69e-11,10;UBERON:0000974,5.98e-11,10;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0001004,1.24e-08,74;UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4;UBERON:0003343,1.69e-07,4;UBERON:0004785,1.69e-07,4;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,33.8799698597006,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01771458373847,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,2.7314956335032,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,3.41410928627218,0,0,0,1.52401723527873,0.684466602170562,3.36760265072938,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,33.8799698597006,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01771458373847,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,2.7314956335032,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,3.41410928627218,0,0,0,1.52401723527873,0.684466602170562,3.36760265072938,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:20075419..20075431,+ | |short_description=p@chr11:20075419..20075431,+ | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p@chr11:20075419..20075431, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:20075419..20075431, + |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.55e-13 | 2 |
acinar cell of salivary gland | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.58e-26 | 1 |
mucosa-associated lymphoid tissue | 3.58e-26 | 1 |
lymphoid tissue | 3.58e-26 | 1 |
tonsillar ring | 3.58e-26 | 1 |
chordate pharynx | 5.13e-23 | 10 |
pharyngeal region of foregut | 5.13e-23 | 10 |
pharynx | 5.33e-21 | 11 |
oral opening | 1.91e-18 | 22 |
anterior region of body | 1.74e-14 | 62 |
craniocervical region | 1.74e-14 | 62 |
mouth | 4.05e-14 | 29 |
stomodeum | 4.05e-14 | 29 |
subdivision of head | 7.37e-13 | 49 |
upper respiratory tract | 1.77e-12 | 19 |
orifice | 1.83e-11 | 36 |
head | 2.77e-11 | 56 |
gland of gut | 5.69e-11 | 10 |
neck | 5.98e-11 | 10 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
respiratory system | 1.24e-08 | 74 |
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |
mucosa of oral region | 1.69e-07 | 4 |
respiratory system mucosa | 1.69e-07 | 4 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |