FFCP PHASE1:Hg19::chr11:28858122..28858128,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:28858122..28858128,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr11:28858122..28858128,+ | |||
|id=chr11:28858122..28858128,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.61e-19!119;CL:0000055!7.68e-17!180;CL:0000057!1.18e-14!75;CL:0000077!1.48e-13!19;CL:0000359!1.06e-12!32;CL:0000144!2.44e-11!625;CL:0000192!4.99e-11!42;CL:0000514!4.99e-11!42;CL:0000213!1.04e-10!57;CL:0000215!1.04e-10!57;CL:0000220!1.45e-10!246;CL:0000680!2.01e-10!57;CL:0000056!2.01e-10!57;CL:0000355!2.01e-10!57;CL:0000548!2.31e-10!679;CL:0000004!2.31e-10!679;CL:0000255!2.31e-10!679;CL:0002321!2.36e-10!248;CL:0000012!3.49e-10!682;CL:0000187!2.93e-09!54;CL:0000076!3.76e-09!62;CL:0000183!5.43e-08!59;CL:0000003!6.48e-08!722;CL:0000393!9.14e-08!60;CL:0000211!9.14e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.72e-16;32!CL:0000511;6.42e-13;1!CL:0002625;6.42e-13;1!CL:0000216;6.42e-13;1!CL:0002594;1.56e-12;4!CL:0000192;1.28e-09;43!CL:0002548;1.17e-08;6!CL:0000187;2.37e-07;55!CL:0002589;2.82e-07;2!CL:0002596;2.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.02e-17,32;CL:0000511,3.76e-13,1;CL:0002625,3.76e-13,1;CL:0000216,3.76e-13,1;CL:0000192,8.10e-13,43;CL:0000514,8.10e-13,43;CL:0002594,1.86e-12,4;CL:0000187,6.91e-10,55;CL:0000680,2.42e-09,58;CL:0000056,2.42e-09,58;CL:0000355,2.42e-09,58;CL:0000393,7.50e-09,61;CL:0000211,7.50e-09,61;CL:0002548,1.53e-08,6;CL:0000222,1.92e-08,121;CL:0002589,2.58e-07,2;CL:0002596,3.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.43e-18!79;UBERON:0007798!4.43e-18!79;UBERON:0004535!1.55e-16!110;UBERON:0001009!9.09e-16!113;UBERON:0001637!9.79e-15!42;UBERON:0003509!9.79e-15!42;UBERON:0004572!9.79e-15!42;UBERON:0004872!4.19e-14!84;UBERON:0001981!2.39e-12!60;UBERON:0007500!2.39e-12!60;UBERON:0004537!2.39e-12!60;UBERON:0006965!2.39e-12!60;UBERON:0000055!9.78e-12!69;UBERON:0000490!1.86e-11!138;UBERON:0004573!2.40e-11!33;UBERON:0004571!2.40e-11!33;UBERON:0003914!4.10e-11!118;UBERON:0001134!2.55e-09!61;UBERON:0002036!2.55e-09!61;UBERON:0003082!2.55e-09!61;UBERON:0007625!2.82e-09!11;UBERON:0002200!4.68e-09!11;UBERON:0006876!4.68e-09!11;UBERON:0002385!7.97e-09!63;UBERON:0001015!7.97e-09!63;UBERON:0000383!7.97e-09!63;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0000477!1.13e-08!286;UBERON:0000947!8.59e-08!21;UBERON:0010191!8.59e-08!21;UBERON:0001444!2.28e-07!48;UBERON:0004290!2.46e-07!70;UBERON:0000488!2.75e-07!4;UBERON:0005256!7.11e-07!143;UBERON:0000119!7.51e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.42e-13;1!UBERON:0001343;6.42e-13;1!UBERON:0004910;6.42e-13;1!UBERON:0004813;6.42e-13;1!UBERON:0001310;1.56e-12;4!UBERON:0004573;1.04e-08;33!UBERON:0004571;1.04e-08;33!UBERON:0001637;4.64e-08;42!UBERON:0003509;4.64e-08;42!UBERON:0004572;4.64e-08;42!UBERON:0001529;2.82e-07;2!UBERON:0005396;2.82e-07;2!UBERON:0007204;2.82e-07;2!UBERON:0004909;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.53e-13,42;UBERON:0003509,3.53e-13,42;UBERON:0004572,3.53e-13,42;UBERON:0001136,3.76e-13,1;UBERON:0001343,3.76e-13,1;UBERON:0004910,3.76e-13,1;UBERON:0005154,3.76e-13,1;UBERON:0005295,3.76e-13,1;UBERON:0004813,3.76e-13,1;UBERON:0005297,3.76e-13,1;UBERON:0005294,3.76e-13,1;UBERON:0010141,3.76e-13,1;UBERON:0005891,3.76e-13,1;UBERON:0004872,7.53e-13,83;UBERON:0001310,1.86e-12,4;UBERON:0004535,1.74e-09,109;UBERON:0007500,3.35e-09,59;UBERON:0001981,3.35e-09,59;UBERON:0004537,3.35e-09,59;UBERON:0006965,3.35e-09,59;UBERON:0001009,3.39e-09,112;UBERON:0004573,5.38e-09,33;UBERON:0004571,5.38e-09,33;UBERON:0002049,7.64e-09,78;UBERON:0007798,7.64e-09,78;UBERON:0003914,9.98e-09,117;UBERON:0001134,1.07e-08,62;UBERON:0002036,1.07e-08,62;UBERON:0003082,1.07e-08,62;UBERON:0002385,2.09e-08,64;UBERON:0001015,2.09e-08,64;UBERON:0000383,2.09e-08,64;UBERON:0000055,6.74e-08,68;UBERON:0002329,1.64e-07,71;UBERON:0003059,1.64e-07,71;UBERON:0007282,1.64e-07,71;UBERON:0004290,1.64e-07,71;UBERON:0009618,1.64e-07,71;UBERON:0003077,2.12e-07,72;UBERON:0007285,2.12e-07,72;UBERON:0001529,2.58e-07,2;UBERON:0007204,2.58e-07,2;UBERON:0007524,2.74e-07,73;UBERON:0005396,3.09e-07,2;UBERON:0004909,3.28e-07,2;UBERON:0007503,8.86e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.661743720148475,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,24.230880088819,0.286836620748814,0,1.12135520028461,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0.358779271377724,0.427114777637135,0,0.300091096084402,0,0.772921620136887,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,4.3299402607582,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,2.61460037580088,0.899756920638513,0,0,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.574072240823034,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,0.976135183992909,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,4.7221852024596,0,0.308033580176089,0.532306030317022,0.869932992075073,0.74129687641568,2.86249773483982,0.372158369359667,2.53103539774981,0.953150969619124,0,0,0,2.35484592059769,0,0.54907405947211,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,1.21746226177622,0.6196469961995,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0.450772826991655,1.14241563650639,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.782982875895635,0.226705925512272,0.463044948647668,0.97894681802587,0.71635536432595,0.308801447160972,0,0.530067437837643,1.15748422962549,0.506827321959218,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:28858122..28858128,+ | |||
}} |
Latest revision as of 21:21, 23 July 2015
Short description: | p@chr11:28858122..28858128, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28858122..28858128, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.02e-17 | 32 |
androgen binding protein secreting cell | 3.76e-13 | 1 |
seminiferous tubule epithelial cell | 3.76e-13 | 1 |
Sertoli cell | 3.76e-13 | 1 |
smooth muscle cell | 8.10e-13 | 43 |
smooth muscle myoblast | 8.10e-13 | 43 |
smooth muscle cell of the umbilical artery | 1.86e-12 | 4 |
muscle cell | 6.91e-10 | 55 |
muscle precursor cell | 2.42e-09 | 58 |
myoblast | 2.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-09 | 58 |
electrically responsive cell | 7.50e-09 | 61 |
electrically active cell | 7.50e-09 | 61 |
cardiac fibroblast | 1.53e-08 | 6 |
mesodermal cell | 1.92e-08 | 121 |
smooth muscle cell of the brachiocephalic vasculature | 2.58e-07 | 2 |
smooth muscle cell of the carotid artery | 3.09e-07 | 2 |