FFCP PHASE1:Hg19::chr11:5247908..5247917,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_DQ655984_5end | |association_with_transcript=50bp_to_DQ655984_5end | ||
|cluster_id=chr11:5247908..5247917,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_DQ655984_5end | |description=CAGE_peak_3_at_DQ655984_5end | ||
|id=chr11:5247908..5247917,+ | |id=chr11:5247908..5247917,+ | ||
|ontology_enrichment_celltype=CL:0000764!3.93e-22!2;CL:0000765!3.93e-22!2;CL:0000050!3.93e-22!2;CL:0000038!3.93e-22!2;CL:0000558!3.93e-22!2;CL:0000547!3.93e-22!2;CL:0000549!3.93e-22!2;CL:0000550!3.93e-22!2;CL:0000552!3.93e-22!2 | |ontology_enrichment_celltype=CL:0000764!3.93e-22!2;CL:0000765!3.93e-22!2;CL:0000050!3.93e-22!2;CL:0000038!3.93e-22!2;CL:0000558!3.93e-22!2;CL:0000547!3.93e-22!2;CL:0000549!3.93e-22!2;CL:0000550!3.93e-22!2;CL:0000552!3.93e-22!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.17e-33;2!CL:0000558;1.17e-33;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.17e-33,2;CL:0000765,1.17e-33,2;CL:0000050,1.17e-33,2;CL:0000038,1.17e-33,2;CL:0000558,1.17e-33,2;CL:0000547,1.17e-33,2;CL:0000549,1.17e-33,2;CL:0000550,1.17e-33,2;CL:0000552,1.17e-33,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.21e-56!15;UBERON:0000179!2.21e-56!15;UBERON:0000463!2.21e-56!15;UBERON:0007023!1.18e-13!115;UBERON:0002426!9.61e-12!1;UBERON:0003831!9.61e-12!1;UBERON:0003898!9.61e-12!1;UBERON:0004830!9.61e-12!1;UBERON:0001774!9.61e-12!1;UBERON:0003830!9.61e-12!1;UBERON:0005175!9.61e-12!1;UBERON:0003897!9.61e-12!1;UBERON:0001103!9.61e-12!1;UBERON:0010084!9.61e-12!1;UBERON:0002135!1.19e-11!1;UBERON:0004535!4.45e-10!110;UBERON:0001009!9.10e-10!113;UBERON:0002390!5.93e-09!102;UBERON:0003061!5.93e-09!102;UBERON:0002193!4.92e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-88;15!UBERON:0000179;2.79e-88;15!UBERON:0000463;2.79e-88;15!UBERON:0002390;1.20e-37;32!UBERON:0002193;6.29e-21;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.94e-88,15;UBERON:0000179,2.94e-88,15;UBERON:0000463,2.94e-88,15;UBERON:0007023,9.57e-17,114;UBERON:0002390,6.56e-13,98;UBERON:0003061,6.56e-13,98;UBERON:0004535,1.17e-11,109;UBERON:0002193,1.17e-11,108;UBERON:0001009,2.51e-11,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50815802633495,8.10449898177192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1638474031077,12.9988325214204,20.5072987382699,5.71756261098694,2.05681136543097,7.13320642311989,12.9607544937148,27.7593811702995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7121256989798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50815802633495,8.10449898177192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1638474031077,12.9988325214204,20.5072987382699,5.71756261098694,2.05681136543097,7.13320642311989,12.9607544937148,27.7593811702995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7121256989798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@DQ655984 | |short_description=p3@DQ655984 | ||
}} | }} |
Latest revision as of 22:48, 23 July 2015
Short description: | p3@DQ655984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DQ655984_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 50bp_to_DQ655984_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.17e-33 | 2 |
erythroblast | 1.17e-33 | 2 |
megakaryocyte-erythroid progenitor cell | 1.17e-33 | 2 |
erythroid progenitor cell | 1.17e-33 | 2 |
reticulocyte | 1.17e-33 | 2 |
proerythroblast | 1.17e-33 | 2 |
basophilic erythroblast | 1.17e-33 | 2 |
polychromatophilic erythroblast | 1.17e-33 | 2 |
orthochromatic erythroblast | 1.17e-33 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.94e-88 | 15 |
haemolymphatic fluid | 2.94e-88 | 15 |
organism substance | 2.94e-88 | 15 |
adult organism | 9.57e-17 | 114 |
hematopoietic system | 6.56e-13 | 98 |
blood island | 6.56e-13 | 98 |
cardiovascular system | 1.17e-11 | 109 |
hemolymphoid system | 1.17e-11 | 108 |
circulatory system | 2.51e-11 | 112 |