FFCP PHASE1:Hg19::chr11:65660606..65660635,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65660606..65660635,-
|short_description=p@chr11:65660606..65660635,-
|description=CAGE_peak_at_chr11:65660606..65660635,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65660606..65660635,- | |||
|coexpression_cluster_id=C3190 | |||
|description=CAGE_peak_at_chr11:65660606..65660635,- | |||
|id=chr11:65660606..65660635,- | |||
|ontology_enrichment_celltype=CL:0000548!5.57e-30!679;CL:0000004!5.57e-30!679;CL:0000255!5.57e-30!679;CL:0000012!1.48e-29!682;CL:0000144!2.41e-21!625;CL:0002371!1.42e-19!591;CL:0000003!2.17e-18!722;CL:0000063!1.69e-17!578;CL:0000220!1.08e-16!246;CL:0002321!2.89e-16!248;CL:0000066!3.50e-13!254;CL:0000055!6.81e-13!180;CL:0000222!2.29e-11!119;CL:0000076!4.69e-10!62;CL:0002057!4.34e-08!42;CL:0000057!5.88e-08!75;CL:0000860!1.09e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-12;33!CL:0002057;3.30e-12;33!CL:0000473;7.40e-08;39!CL:0000234;7.40e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-10,42;CL:0002057,1.61e-10,42;CL:0000222,1.65e-08,121;CL:0000473,4.56e-08,48;CL:0000234,4.56e-08,48;CL:0002321,8.69e-08,250;CL:0000076,9.79e-08,63;CL:0000057,9.28e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.07e-10!42;UBERON:0003509!1.07e-10!42;UBERON:0004572!1.07e-10!42;UBERON:0000926!1.20e-10!448;UBERON:0004120!1.20e-10!448;UBERON:0006603!1.20e-10!448;UBERON:0001981!8.36e-09!60;UBERON:0007500!8.36e-09!60;UBERON:0004537!8.36e-09!60;UBERON:0006965!8.36e-09!60;UBERON:0004573!9.00e-09!33;UBERON:0004571!9.00e-09!33;UBERON:0000055!2.21e-08!69;UBERON:0000467!3.07e-08!625;UBERON:0000480!4.62e-08!626;UBERON:0000486!7.26e-08!82;UBERON:0002049!8.15e-08!79;UBERON:0007798!8.15e-08!79;UBERON:0005256!1.36e-07!143;UBERON:0002204!1.42e-07!167;UBERON:0003102!1.45e-07!95;UBERON:0000914!1.56e-07!83;UBERON:0002329!1.56e-07!83;UBERON:0003077!1.56e-07!83;UBERON:0003059!1.56e-07!83;UBERON:0007282!1.56e-07!83;UBERON:0009618!1.56e-07!83;UBERON:0007285!1.56e-07!83;UBERON:0003914!4.38e-07!118;UBERON:0002100!5.25e-07!216;UBERON:0004290!8.21e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.38e-08,42;UBERON:0003509,1.38e-08,42;UBERON:0004572,1.38e-08,42;UBERON:0002204,2.82e-08,167;UBERON:0007503,5.31e-07,78;UBERON:0000926,6.68e-07,315;UBERON:0004120,6.68e-07,315;UBERON:0006603,6.68e-07,315 | |||
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| ||
|short_description=p@chr11:65660606..65660635,- | |||
}} | }} |
Latest revision as of 00:52, 24 July 2015
Short description: | p@chr11:65660606..65660635, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65660606..65660635, - |
Coexpression cluster: | C3190_papillary_leiomyoma_mesothelioma_meningioma_myxofibrosarcoma_squamous_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-10 | 42 |
mesodermal cell | 1.65e-08 | 121 |
defensive cell | 4.56e-08 | 48 |
phagocyte | 4.56e-08 | 48 |
embryonic cell | 8.69e-08 | 250 |
squamous epithelial cell | 9.79e-08 | 63 |
fibroblast | 9.28e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
artery | 1.38e-08 | 42 |
arterial blood vessel | 1.38e-08 | 42 |
arterial system | 1.38e-08 | 42 |
musculoskeletal system | 2.82e-08 | 167 |
epithelial vesicle | 5.31e-07 | 78 |
mesoderm | 6.68e-07 | 315 |
mesoderm-derived structure | 6.68e-07 | 315 |
presumptive mesoderm | 6.68e-07 | 315 |