FFCP PHASE1:Hg19::chr11:69832005..69832020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000534086_5end | |association_with_transcript=23bp_to_ENST00000534086_5end | ||
|cluster_id=chr11:69832005..69832020,+ | |||
|coexpression_cluster_id=C346 | |coexpression_cluster_id=C346 | ||
|description=CAGE_peak_2_at_ENST00000534086_5end | |description=CAGE_peak_2_at_ENST00000534086_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002537!8.93e-07!5 | |ontology_enrichment_celltype=CL:0002537!8.93e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.74e-14;19!CL:0002577;8.08e-09;3!CL:0002541;2.36e-08;3 | |ontology_enrichment_celltype_v019=CL:0000349;5.74e-14;19!CL:0002577;8.08e-09;3!CL:0002541;2.36e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.71e-14,19;CL:0002577,8.41e-09,3;CL:0002541,3.57e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.45e-07;1!UBERON:0009143;7.08e-07;1!UBERON:0004874;7.08e-07;1 | |ontology_enrichment_development_v019=UBERON:0006242;1.45e-07;1!UBERON:0009143;7.08e-07;1!UBERON:0004874;7.08e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3111;1.86e-07;1!DOID:3603;1.86e-07;1 | |ontology_enrichment_disease_v019=DOID:3111;1.86e-07;1!DOID:3603;1.86e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,1.86e-07,1;DOID:3603,1.86e-07,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.40e-19,14;UBERON:0000158,4.40e-19,14;UBERON:0003124,3.96e-13,7;UBERON:0000478,8.90e-11,24;UBERON:0005409,4.75e-10,25;UBERON:0006947,2.55e-08,3;UBERON:0004054,2.55e-08,3;UBERON:0000920,3.57e-08,3;UBERON:0000305,5.77e-08,7;UBERON:0000160,8.62e-08,17;UBERON:0004871,5.06e-07,8;UBERON:0004923,5.79e-07,66;UBERON:0001000,6.12e-07,1;UBERON:0005352,6.12e-07,1;UBERON:0000989,6.88e-07,1;UBERON:0008811,6.88e-07,1;UBERON:0006258,6.88e-07,1;UBERON:0005876,6.88e-07,1;UBERON:0004874,6.88e-07,1;UBERON:0001987,8.45e-07,4;UBERON:0004340,8.45e-07,4;UBERON:0001301,9.18e-07,1 | |||
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| ||
|short_description=p2@ENST00000534086 | |short_description=p2@ENST00000534086 | ||
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Latest revision as of 02:00, 24 July 2015
Short description: | p2@ENST00000534086 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000534086_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 23bp_to_ENST00000534086_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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extraembryonic cell | 7.71e-14 | 19 |
placental epithelial cell | 8.41e-09 | 3 |
chorionic membrane mesenchymal stem cell | 3.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.40e-19 | 14 |
membranous layer | 4.40e-19 | 14 |
chorion | 3.96e-13 | 7 |
extraembryonic structure | 8.90e-11 | 24 |
gastrointestinal system | 4.75e-10 | 25 |
male genital duct | 2.55e-08 | 3 |
internal male genitalia | 2.55e-08 | 3 |
egg chorion | 3.57e-08 | 3 |
amnion | 5.77e-08 | 7 |
intestine | 8.62e-08 | 17 |
somatic layer of lateral plate mesoderm | 5.06e-07 | 8 |
organ component layer | 5.79e-07 | 66 |
vas deferens | 6.12e-07 | 1 |
spermatic cord | 6.12e-07 | 1 |
penis | 6.88e-07 | 1 |
intromittent organ | 6.88e-07 | 1 |
lateral plate mesenchyme | 6.88e-07 | 1 |
undifferentiated genital tubercle | 6.88e-07 | 1 |
somatopleure | 6.88e-07 | 1 |
placenta | 8.45e-07 | 4 |
allantois | 8.45e-07 | 4 |
epididymis | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.86e-07 | 1 |
mucinous cystadenocarcinoma | 1.86e-07 | 1 |