FFCP PHASE1:Hg19::chr12:105962745..105962748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105962745..105962748,+ | |||
|coexpression_cluster_id=C3225 | |coexpression_cluster_id=C3225 | ||
|description=CAGE_peak_at_chr12:105962745..105962748,+ | |description=CAGE_peak_at_chr12:105962745..105962748,+ | ||
|id=chr12:105962745..105962748,+ | |id=chr12:105962745..105962748,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.59e-19!24;CL:0002078!1.82e-13!44;CL:0000115!4.92e-12!35;CL:0005020!1.31e-11!6;CL:0002138!1.31e-11!6;CL:0005022!1.31e-11!6;CL:0000071!9.17e-11!18;CL:0002546!9.17e-11!18;CL:0000213!2.34e-09!57;CL:0000215!2.34e-09!57;CL:0002618!2.64e-09!3;CL:0002543!8.63e-08!6;CL:1000413!2.60e-07!9 | |ontology_enrichment_celltype=CL:0002139!2.59e-19!24;CL:0002078!1.82e-13!44;CL:0000115!4.92e-12!35;CL:0005020!1.31e-11!6;CL:0002138!1.31e-11!6;CL:0005022!1.31e-11!6;CL:0000071!9.17e-11!18;CL:0002546!9.17e-11!18;CL:0000213!2.34e-09!57;CL:0000215!2.34e-09!57;CL:0002618!2.64e-09!3;CL:0002543!8.63e-08!6;CL:1000413!2.60e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002618;3.03e-98;3!CL:0002543;1.05e-49;6!CL:0002139;1.24e-34;24!CL:0002138;5.13e-23;6!CL:0000115;4.55e-18;36!CL:0000047;8.34e-18;2!CL:0000071;3.30e-17;18!CL:0000213;8.41e-11;58!CL:0000215;8.41e-11;58!CL:0002078;1.35e-10;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.03e-98,3;CL:0002543,1.05e-49,6;CL:0002139,1.20e-34,24;CL:0000115,2.54e-23,36;CL:0005020,4.86e-23,6;CL:0002138,4.86e-23,6;CL:0005022,4.86e-23,6;CL:0002078,8.89e-19,45;CL:0000071,3.30e-17,18;CL:0002546,3.30e-17,18;CL:0000213,1.09e-14,58;CL:0000215,1.09e-14,58;CL:0000222,2.95e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;5.13e-23;6!CL:0002546;3.30e-17;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.17e-11!18;UBERON:0004638!9.17e-11!18;UBERON:0004852!9.17e-11!18;UBERON:0006914!6.66e-09!25;UBERON:0001473!1.43e-08!8;UBERON:0004536!1.43e-08!8;UBERON:0006558!1.43e-08!8;UBERON:0000487!1.91e-08!22;UBERON:0003915!2.60e-07!9;UBERON:0004700!2.60e-07!9;UBERON:0001917!2.60e-07!9;UBERON:0000055!4.09e-07!69;UBERON:0002465!9.54e-07!10 | |ontology_enrichment_uberon=UBERON:0001986!9.17e-11!18;UBERON:0004638!9.17e-11!18;UBERON:0004852!9.17e-11!18;UBERON:0006914!6.66e-09!25;UBERON:0001473!1.43e-08!8;UBERON:0004536!1.43e-08!8;UBERON:0006558!1.43e-08!8;UBERON:0000487!1.91e-08!22;UBERON:0003915!2.60e-07!9;UBERON:0004700!2.60e-07!9;UBERON:0001917!2.60e-07!9;UBERON:0000055!4.09e-07!69;UBERON:0002465!9.54e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002066;2.01e-59;5!UBERON:0001638;1.73e-33;9!UBERON:0010260;1.73e-33;9!UBERON:0003920;1.73e-33;9!UBERON:0004582;1.73e-33;9!UBERON:0001473;1.50e-17;8!UBERON:0004536;1.50e-17;8!UBERON:0006558;1.50e-17;8!UBERON:0004638;3.30e-17;18!UBERON:0001986;3.30e-17;18!UBERON:0004852;3.30e-17;18!UBERON:0002465;2.94e-14;10!UBERON:0000487;3.13e-14;22!UBERON:0006914;1.28e-12;25!UBERON:0000490;1.79e-07;33!UBERON:0002049;3.71e-07;75!UBERON:0007798;3.71e-07;75!UBERON:0000055;7.50e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,2.01e-59,5;UBERON:0001638,1.73e-33,9;UBERON:0010260,1.73e-33,9;UBERON:0003920,1.73e-33,9;UBERON:0004582,1.73e-33,9;UBERON:0001473,1.44e-17,8;UBERON:0004536,1.44e-17,8;UBERON:0006558,1.44e-17,8;UBERON:0004638,3.30e-17,18;UBERON:0001986,3.30e-17,18;UBERON:0004852,3.30e-17,18;UBERON:0002465,2.84e-14,10;UBERON:0000487,3.13e-14,22;UBERON:0006914,1.28e-12,25;UBERON:0000055,1.33e-12,68;UBERON:0002049,4.79e-11,78;UBERON:0007798,4.79e-11,78;UBERON:0004535,5.11e-08,109;UBERON:0001009,8.20e-08,112 | |||
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| ||
|short_description=p@chr12:105962745..105962748,+ | |short_description=p@chr12:105962745..105962748,+ | ||
}} | }} |
Latest revision as of 04:24, 24 July 2015
Short description: | p@chr12:105962745..105962748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105962745..105962748, + |
Coexpression cluster: | C3225_Endothelial_Neural_Lymphatic_Aortic_aorta_Whole_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.03e-98 | 3 |
vein endothelial cell | 1.05e-49 | 6 |
endothelial cell of vascular tree | 1.20e-34 | 24 |
endothelial cell | 2.54e-23 | 36 |
lymphangioblast | 4.86e-23 | 6 |
endothelial cell of lymphatic vessel | 4.86e-23 | 6 |
vascular lymphangioblast | 4.86e-23 | 6 |
meso-epithelial cell | 8.89e-19 | 45 |
blood vessel endothelial cell | 3.30e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.30e-17 | 18 |
lining cell | 1.09e-14 | 58 |
barrier cell | 1.09e-14 | 58 |
mesodermal cell | 2.95e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 2.01e-59 | 5 |
vein | 1.73e-33 | 9 |
umbilical blood vessel | 1.73e-33 | 9 |
venous blood vessel | 1.73e-33 | 9 |
venous system | 1.73e-33 | 9 |
lymphatic vessel | 1.44e-17 | 8 |
lymph vasculature | 1.44e-17 | 8 |
lymphatic part of lymphoid system | 1.44e-17 | 8 |
blood vessel endothelium | 3.30e-17 | 18 |
endothelium | 3.30e-17 | 18 |
cardiovascular system endothelium | 3.30e-17 | 18 |
lymphoid system | 2.84e-14 | 10 |
simple squamous epithelium | 3.13e-14 | 22 |
squamous epithelium | 1.28e-12 | 25 |
vessel | 1.33e-12 | 68 |
vasculature | 4.79e-11 | 78 |
vascular system | 4.79e-11 | 78 |
cardiovascular system | 5.11e-08 | 109 |
circulatory system | 8.20e-08 | 112 |