FFCP PHASE1:Hg19::chr12:120779451..120779455,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:120779451..120779455,- to FFCP PHASE1:Hg19::chr12:120779451..120779455,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:120779451..120779455,- | |||
|description=CAGE_peak_at_chr12:120779451..120779455,- | |||
|id=chr12:120779451..120779455,- | |||
|ontology_enrichment_celltype=CL:0002319!3.03e-14!25;CL:0000133!6.37e-12!59;CL:0000047!2.11e-11!8;CL:0000540!1.96e-09!6;CL:0000031!1.96e-09!6;CL:0000404!1.96e-09!6;CL:0000221!1.69e-08!71;CL:0002322!1.25e-07!5;CL:0000128!3.24e-07!7;CL:0000126!3.24e-07!7;CL:0000127!3.24e-07!7;CL:0002453!3.24e-07!7;CL:0000039!6.48e-07!7;CL:0000586!6.48e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.50e-24;25!CL:0000540;1.77e-20;6!CL:0000404;1.77e-20;6!CL:0002605;7.51e-16;3!CL:0002322;7.00e-15;5!CL:0000128;9.04e-12;7!CL:0000126;9.04e-12;7!CL:0000127;9.04e-12;7!CL:0000243;4.38e-10;15!CL:0000125;4.38e-10;15!CL:0000095;5.95e-09;17!CL:0002321;1.96e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.50e-24,25;CL:0000047,1.60e-21,8;CL:0000540,1.78e-20,6;CL:0000031,1.78e-20,6;CL:0000404,1.78e-20,6;CL:0000133,8.79e-17,59;CL:0002605,7.20e-16,3;CL:0002322,4.87e-15,5;CL:0000221,3.41e-13,72;CL:0000128,9.21e-12,7;CL:0000126,9.21e-12,7;CL:0000127,9.21e-12,7;CL:0002453,9.21e-12,7;CL:0000243,4.65e-10,15;CL:0000125,4.65e-10,15;CL:0000030,4.65e-10,15;CL:0000339,4.65e-10,15;CL:0000333,1.87e-09,41;CL:0000095,6.27e-09,17;CL:0000123,6.27e-09,17 | |||
|ontology_enrichment_development_v019=CL:0000031;1.77e-20;6!CL:0000339;4.38e-10;15!CL:0000133;8.03e-10;59!UBERON:0006238;2.60e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!3.79e-15!22;DOID:2994!3.79e-15!22;DOID:0050687!4.21e-09!143;DOID:171!1.30e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-33!94;UBERON:0001016!1.39e-33!94;UBERON:0005743!3.59e-30!86;UBERON:0001017!2.21e-26!82;UBERON:0002346!1.68e-23!90;UBERON:0000924!6.08e-21!173;UBERON:0006601!6.08e-21!173;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0003056!8.43e-19!61;UBERON:0004121!1.22e-18!169;UBERON:0000955!1.54e-17!69;UBERON:0006238!1.54e-17!69;UBERON:0001049!3.80e-17!57;UBERON:0005068!3.80e-17!57;UBERON:0006241!3.80e-17!57;UBERON:0007135!3.80e-17!57;UBERON:0003080!6.47e-16!42;UBERON:0002791!9.40e-16!33;UBERON:0001893!4.41e-15!34;UBERON:0002780!4.79e-15!41;UBERON:0001890!4.79e-15!41;UBERON:0006240!4.79e-15!41;UBERON:0002020!6.61e-14!34;UBERON:0003528!6.61e-14!34;UBERON:0002616!7.31e-14!59;UBERON:0001869!9.94e-14!32;UBERON:0000033!1.08e-13!123;UBERON:0000153!4.79e-13!129;UBERON:0007811!4.79e-13!129;UBERON:0000956!1.02e-12!25;UBERON:0000203!1.02e-12!25;UBERON:0001950!1.78e-09!20;UBERON:0002619!1.88e-09!22;UBERON:0000922!2.48e-08!612;UBERON:0000966!1.45e-07!5;UBERON:0005388!1.45e-07!5;UBERON:0001802!1.45e-07!5;UBERON:0000468!7.00e-07!659;UBERON:0000064!9.35e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.41e-08;49!UBERON:0000956;3.49e-08;25!UBERON:0000203;3.49e-08;25!UBERON:0002791;5.48e-08;32!UBERON:0001869;5.50e-08;32!UBERON:0000955;2.13e-07;68!UBERON:0003528;7.84e-07;34!UBERON:0002020;7.84e-07;34!UBERON:0001016;7.85e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.17e-21,81;UBERON:0001016,3.03e-20,89;UBERON:0004121,1.63e-11,171;UBERON:0000924,1.63e-11,171;UBERON:0006601,1.63e-11,171;UBERON:0000955,2.04e-10,68;UBERON:0006238,2.04e-10,68;UBERON:0011216,3.13e-09,223;UBERON:0003075,2.81e-08,82;UBERON:0007284,2.81e-08,82;UBERON:0000956,3.90e-08,25;UBERON:0000203,3.90e-08,25;UBERON:0002791,5.44e-08,32;UBERON:0001869,5.44e-08,32;UBERON:0001049,5.73e-08,56;UBERON:0005068,5.73e-08,56;UBERON:0006241,5.73e-08,56;UBERON:0007135,5.73e-08,56;UBERON:0002346,9.15e-08,86;UBERON:0003528,1.83e-07,34;UBERON:0002020,1.83e-07,34;UBERON:0001893,1.83e-07,34;UBERON:0003056,3.57e-07,61;UBERON:0000073,5.63e-07,53;UBERON:0002616,5.63e-07,53 | |||
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| ||
|short_description=p@chr12:120779451..120779455,- | |||
}} | }} |
Latest revision as of 05:45, 24 July 2015
Short description: | p@chr12:120779451..120779455, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120779451..120779455, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.50e-24 | 25 |
neuronal stem cell | 1.60e-21 | 8 |
neuron | 1.78e-20 | 6 |
neuroblast | 1.78e-20 | 6 |
electrically signaling cell | 1.78e-20 | 6 |
neurectodermal cell | 8.79e-17 | 59 |
astrocyte of the cerebral cortex | 7.20e-16 | 3 |
embryonic stem cell | 4.87e-15 | 5 |
ectodermal cell | 3.41e-13 | 72 |
oligodendrocyte | 9.21e-12 | 7 |
macroglial cell | 9.21e-12 | 7 |
astrocyte | 9.21e-12 | 7 |
oligodendrocyte precursor cell | 9.21e-12 | 7 |
glial cell (sensu Vertebrata) | 4.65e-10 | 15 |
glial cell | 4.65e-10 | 15 |
glioblast | 4.65e-10 | 15 |
glioblast (sensu Vertebrata) | 4.65e-10 | 15 |
migratory neural crest cell | 1.87e-09 | 41 |
neuron associated cell | 6.27e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 6.27e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.17e-21 | 81 |
nervous system | 3.03e-20 | 89 |
ectoderm-derived structure | 1.63e-11 | 171 |
ectoderm | 1.63e-11 | 171 |
presumptive ectoderm | 1.63e-11 | 171 |
brain | 2.04e-10 | 68 |
future brain | 2.04e-10 | 68 |
organ system subdivision | 3.13e-09 | 223 |
neural plate | 2.81e-08 | 82 |
presumptive neural plate | 2.81e-08 | 82 |
cerebral cortex | 3.90e-08 | 25 |
pallium | 3.90e-08 | 25 |
regional part of telencephalon | 5.44e-08 | 32 |
cerebral hemisphere | 5.44e-08 | 32 |
neural tube | 5.73e-08 | 56 |
neural rod | 5.73e-08 | 56 |
future spinal cord | 5.73e-08 | 56 |
neural keel | 5.73e-08 | 56 |
neurectoderm | 9.15e-08 | 86 |
brain grey matter | 1.83e-07 | 34 |
gray matter | 1.83e-07 | 34 |
telencephalon | 1.83e-07 | 34 |
pre-chordal neural plate | 3.57e-07 | 61 |
regional part of nervous system | 5.63e-07 | 53 |
regional part of brain | 5.63e-07 | 53 |