FFCP PHASE1:Hg19::chr12:130529670..130529676,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000538806_5end | |association_with_transcript=-68bp_to_ENST00000538806_5end | ||
|cluster_id=chr12:130529670..130529676,- | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_2_at_ENST00000538806_5end | |description=CAGE_peak_2_at_ENST00000538806_5end | ||
|id=chr12:130529670..130529676,- | |id=chr12:130529670..130529676,- | ||
|ontology_enrichment_celltype=CL:0002535!1.45e-07!2 | |ontology_enrichment_celltype=CL:0002535!1.45e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000214;6.76e-18;3!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,6.76e-18,3;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!4.53e-14!1;DOID:1357!4.53e-14!1;DOID:4362!4.55e-11!5 | |ontology_enrichment_disease=DOID:0050619!4.53e-14!1;DOID:1357!4.53e-14!1;DOID:4362!4.55e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.12e-50;1!DOID:1357;5.12e-50;1!DOID:4362;3.42e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.58e-50,1;DOID:1357,6.58e-50,1;DOID:4362,3.26e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001764!4.53e-14!1;UBERON:0001825!4.53e-14!1;UBERON:0002022!2.07e-13!1;UBERON:0002780!3.67e-10!41;UBERON:0001890!3.67e-10!41;UBERON:0006240!3.67e-10!41;UBERON:0003080!6.44e-10!42;UBERON:0001049!8.66e-10!57;UBERON:0005068!8.66e-10!57;UBERON:0006241!8.66e-10!57;UBERON:0007135!8.66e-10!57;UBERON:0001950!1.49e-09!20;UBERON:0002616!1.92e-09!59;UBERON:0000002!2.26e-09!6;UBERON:0001560!2.26e-09!6;UBERON:0001869!3.24e-09!32;UBERON:0002791!6.08e-09!33;UBERON:0002619!9.64e-09!22;UBERON:0002020!1.10e-08!34;UBERON:0003528!1.10e-08!34;UBERON:0001893!1.10e-08!34;UBERON:0000955!6.91e-08!69;UBERON:0006238!6.91e-08!69;UBERON:0000956!9.30e-08!25;UBERON:0000203!9.30e-08!25;UBERON:0006955!1.45e-07!2;UBERON:0004801!1.45e-07!2;UBERON:0001873!1.75e-07!2;UBERON:0010122!1.75e-07!2;UBERON:0001897!1.87e-07!2;UBERON:0001871!4.55e-07!7;UBERON:0003056!9.06e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.12e-50;1!UBERON:0001825;5.12e-50;1!UBERON:0006915;6.76e-18;3!UBERON:0007616;6.76e-18;3!UBERON:0002217;6.76e-18;3!UBERON:0002018;6.76e-18;3!UBERON:0000002;1.50e-09;6!UBERON:0001560;1.50e-09;6!UBERON:0004905;1.49e-07;8!UBERON:0000982;1.49e-07;8!UBERON:0004770;1.49e-07;8!UBERON:0004457;7.48e-07;9!UBERON:0000042;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.58e-50,1;UBERON:0001825,6.58e-50,1;UBERON:0006915,6.76e-18,3;UBERON:0007616,6.76e-18,3;UBERON:0002217,6.76e-18,3;UBERON:0002018,6.76e-18,3;UBERON:0000002,1.44e-09,6;UBERON:0001560,1.44e-09,6;UBERON:0004905,1.49e-07,8;UBERON:0000982,1.49e-07,8;UBERON:0004770,1.49e-07,8 | |||
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|short_description=p2@ENST00000538806 | |short_description=p2@ENST00000538806 | ||
}} | }} |
Latest revision as of 06:43, 24 July 2015
Short description: | p2@ENST00000538806 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000538806_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | -68bp_to_ENST00000538806_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 6.76e-18 | 3 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.58e-50 | 1 |
paranasal sinus | 6.58e-50 | 1 |
stratified squamous epithelium | 6.76e-18 | 3 |
layer of synovial tissue | 6.76e-18 | 3 |
synovial joint | 6.76e-18 | 3 |
synovial membrane of synovial joint | 6.76e-18 | 3 |
uterine cervix | 1.44e-09 | 6 |
neck of organ | 1.44e-09 | 6 |
articulation | 1.49e-07 | 8 |
skeletal joint | 1.49e-07 | 8 |
articular system | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.58e-50 | 1 |
maxillary sinus cancer | 6.58e-50 | 1 |
cervical cancer | 3.26e-11 | 5 |