FFCP PHASE1:Hg19::chr12:45904157..45904158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:45904157..45904158,- | |||
|description=CAGE_peak_at_chr12:45904157..45904158,- | |description=CAGE_peak_at_chr12:45904157..45904158,- | ||
|id=chr12:45904157..45904158,- | |id=chr12:45904157..45904158,- | ||
|ontology_enrichment_celltype=CL:0000071!1.27e-07!18;CL:0002546!1.27e-07!18;CL:0000548!4.75e-07!679;CL:0000004!4.75e-07!679;CL:0000255!4.75e-07!679;CL:0000012!7.93e-07!682 | |ontology_enrichment_celltype=CL:0000071!1.27e-07!18;CL:0002546!1.27e-07!18;CL:0000548!4.75e-07!679;CL:0000004!4.75e-07!679;CL:0000255!4.75e-07!679;CL:0000012!7.93e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:1000413;1.19e-16;9!CL:0000115;1.64e-14;36!CL:0002367;1.70e-13;2!CL:0002545;4.30e-13;2!CL:0000071;9.56e-12;18!CL:0002078;3.99e-11;45!CL:0002551;7.13e-10;6!CL:0002544;1.21e-09;6!CL:0002139;1.14e-08;24!CL:0002681;3.02e-08;12!CL:0002584;3.02e-08;12!CL:0002550;2.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,4.94e-17,45;CL:1000413,2.24e-16,9;CL:0000115,4.00e-15,36;CL:0002367,7.57e-14,2;CL:0002545,4.33e-13,2;CL:0000071,1.39e-11,18;CL:0002546,1.39e-11,18;CL:0000213,1.25e-10,58;CL:0000215,1.25e-10,58;CL:0002551,9.83e-10,6;CL:0002544,1.73e-09,6;CL:0002139,1.49e-08,24;CL:0002681,4.04e-08,12;CL:0002584,4.04e-08,12;CL:0002550,1.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;9.56e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!3.36e-11!51;DOID:0060083!3.36e-11!51;DOID:1240!3.89e-09!39;DOID:162!1.64e-08!235;DOID:14566!6.15e-08!239 | |ontology_enrichment_disease=DOID:2531!3.36e-11!51;DOID:0060083!3.36e-11!51;DOID:1240!3.89e-09!39;DOID:162!1.64e-08!235;DOID:14566!6.15e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.20e-07;1!DOID:2355;2.20e-07;1!DOID:5093;3.61e-07;4!DOID:1612;3.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.51e-07,1;DOID:2355,1.83e-07,1;DOID:5093,2.83e-07,4;DOID:1612,2.83e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.27e-07!18;UBERON:0004638!1.27e-07!18;UBERON:0004852!1.27e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!1.27e-07!18;UBERON:0004638!1.27e-07!18;UBERON:0004852!1.27e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.19e-16;9!UBERON:0004700;1.19e-16;9!UBERON:0001917;1.19e-16;9!UBERON:0005969;1.70e-13;2!UBERON:0003956;1.70e-13;2!UBERON:0005800;4.30e-13;2!UBERON:0001515;4.30e-13;2!UBERON:0004638;9.56e-12;18!UBERON:0001986;9.56e-12;18!UBERON:0004852;9.56e-12;18!UBERON:0002067;3.71e-11;9!UBERON:0006914;3.88e-11;25!UBERON:0000487;1.65e-09;22!UBERON:0001225;3.02e-08;12!UBERON:0008987;3.02e-08;12!UBERON:0000490;4.51e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,2.24e-16,9;UBERON:0004700,2.24e-16,9;UBERON:0001917,2.24e-16,9;UBERON:0005969,7.57e-14,2;UBERON:0003956,7.57e-14,2;UBERON:0005800,4.33e-13,2;UBERON:0001515,4.33e-13,2;UBERON:0004638,1.39e-11,18;UBERON:0001986,1.39e-11,18;UBERON:0004852,1.39e-11,18;UBERON:0002067,4.09e-11,9;UBERON:0004016,4.09e-11,9;UBERON:0010083,4.09e-11,9;UBERON:0006914,5.28e-11,25;UBERON:0000487,2.22e-09,22;UBERON:0001225,4.04e-08,12;UBERON:0008987,4.04e-08,12 | |||
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|short_description=p@chr12:45904157..45904158,- | |short_description=p@chr12:45904157..45904158,- | ||
}} | }} |
Latest revision as of 08:35, 24 July 2015
Short description: | p@chr12:45904157..45904158, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45904157..45904158, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 4.94e-17 | 45 |
endothelial cell of artery | 2.24e-16 | 9 |
endothelial cell | 4.00e-15 | 36 |
trabecular meshwork cell | 7.57e-14 | 2 |
thoracic aorta endothelial cell | 4.33e-13 | 2 |
blood vessel endothelial cell | 1.39e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.39e-11 | 18 |
lining cell | 1.25e-10 | 58 |
barrier cell | 1.25e-10 | 58 |
fibroblast of dermis | 9.83e-10 | 6 |
aortic endothelial cell | 1.73e-09 | 6 |
endothelial cell of vascular tree | 1.49e-08 | 24 |
kidney cortical cell | 4.04e-08 | 12 |
renal cortical epithelial cell | 4.04e-08 | 12 |
fibroblast of the conjuctiva | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 2.24e-16 | 9 |
arterial system endothelium | 2.24e-16 | 9 |
endothelium of artery | 2.24e-16 | 9 |
reticulum trabeculare | 7.57e-14 | 2 |
aqueous drainage system | 7.57e-14 | 2 |
segment of aorta | 4.33e-13 | 2 |
thoracic aorta | 4.33e-13 | 2 |
blood vessel endothelium | 1.39e-11 | 18 |
endothelium | 1.39e-11 | 18 |
cardiovascular system endothelium | 1.39e-11 | 18 |
dermis | 4.09e-11 | 9 |
dermatome | 4.09e-11 | 9 |
future dermis | 4.09e-11 | 9 |
squamous epithelium | 5.28e-11 | 25 |
simple squamous epithelium | 2.22e-09 | 22 |
cortex of kidney | 4.04e-08 | 12 |
renal parenchyma | 4.04e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.51e-07 | 1 |
anemia | 1.83e-07 | 1 |
thoracic cancer | 2.83e-07 | 4 |
breast cancer | 2.83e-07 | 4 |