FFCP PHASE1:Hg19::chr12:52908957..52908986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52908957..52908986,+ to FFCP PHASE1:Hg19::chr12:52908957..52908986,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=230bp_to_CU687195_5end | |||
|cluster_id=chr12:52908957..52908986,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_6_at_CU687195_5end | |||
|id=chr12:52908957..52908986,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.46e-34!43;CL:0002159!1.17e-25!13;CL:0000223!9.94e-23!59;CL:0000066!4.08e-21!254;CL:0002368!5.03e-20!13;CL:0002251!4.34e-19!21;CL:0000622!4.49e-14!5;CL:0000362!6.48e-13!8;CL:0000076!1.03e-12!62;CL:0000240!1.34e-12!6;CL:0000311!1.34e-12!6;CL:0000079!1.34e-12!6;CL:0000237!1.34e-12!6;CL:0000036!1.34e-12!6;CL:0000357!1.34e-12!6;CL:0000114!1.34e-12!6;CL:0002077!6.30e-12!33;CL:0000154!1.15e-11!6;CL:0002202!2.52e-11!9;CL:0002632!2.52e-11!9;CL:0000312!6.00e-10!5;CL:0002328!7.30e-10!3;CL:0002166!1.78e-09!3;CL:0000068!3.03e-09!3;CL:0000069!3.03e-09!3;CL:0000307!3.03e-09!3;CL:0000377!3.03e-09!3;CL:0002621!3.58e-09!3;CL:0002623!5.13e-09!3;CL:0000220!7.80e-08!246;CL:0002321!1.07e-07!248;CL:0000150!1.21e-07!9;CL:0002327!1.96e-07!4;CL:0000575!3.02e-07!2;CL:0000244!3.46e-07!4;CL:0000731!3.46e-07!4;CL:0000317!9.89e-07!2;CL:1000448!9.89e-07!2;CL:0002308!9.89e-07!2;CL:0002140!9.89e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.78e-32;14!CL:0002076;9.22e-19;42!CL:0002328;3.16e-18;3!CL:0002166;3.15e-17;3!CL:0002621;3.15e-17;3!CL:0000240;1.84e-16;6!CL:0000311;1.84e-16;6!CL:0000079;1.84e-16;6!CL:0000237;1.84e-16;6!CL:0002202;3.56e-16;9!CL:0002632;3.56e-16;9!CL:0002368;1.33e-15;13!CL:0002327;7.12e-14;4!CL:0000575;4.83e-13;2!CL:0000312;1.29e-11;5!CL:0002077;1.90e-11;34!CL:0000362;5.18e-11;9!CL:0002251;1.15e-09;20!CL:0000307;8.08e-09;3!CL:0002577;1.04e-08;3!CL:0002231;2.45e-08;3!CL:0002336;2.59e-07;1!CL:0002261;2.59e-07;1!CL:0002170;2.59e-07;1!CL:0000244;6.70e-07;4!CL:0000731;6.70e-07;4!CL:0002252;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.14e-32,14;CL:0002076,1.66e-23,42;CL:0002328,2.50e-18,3;CL:0002166,1.51e-17,3;CL:0002621,6.21e-17,3;CL:0000240,1.81e-16,6;CL:0000311,1.81e-16,6;CL:0000079,1.81e-16,6;CL:0000237,1.81e-16,6;CL:0000036,1.81e-16,6;CL:0000357,1.81e-16,6;CL:0000114,1.81e-16,6;CL:0000223,3.10e-16,58;CL:0002202,3.56e-16,9;CL:0002632,3.56e-16,9;CL:0002368,1.23e-15,13;CL:0000066,8.34e-15,253;CL:0002327,8.30e-14,4;CL:0000575,4.70e-13,2;CL:0002077,1.46e-12,34;CL:0000312,1.29e-11,5;CL:0000362,5.39e-11,9;CL:0002251,1.33e-09,20;CL:0002577,9.09e-09,3;CL:0000068,9.45e-09,3;CL:0000069,9.45e-09,3;CL:0000307,9.45e-09,3;CL:0000377,9.45e-09,3;CL:0002231,3.44e-08,3;CL:0002336,2.52e-07,1;CL:0002261,2.52e-07,1;CL:0002170,2.52e-07,1;CL:0002321,2.97e-07,250;CL:0000244,6.51e-07,4;CL:0000731,6.51e-07,4;CL:0002252,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;1.84e-16;6!CL:0000114;1.84e-16;6!CL:0000223;5.37e-10;58!CL:0000377;8.08e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!1.18e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.71e-07;1!DOID:3149;3.71e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.20e-07,1;DOID:3149,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!7.23e-19!21;UBERON:0001004!1.45e-18!72;UBERON:0000165!7.78e-16!28;UBERON:0000930!7.78e-16!28;UBERON:0000161!8.48e-16!35;UBERON:0003729!1.99e-13!5;UBERON:0004119!2.40e-13!169;UBERON:0000925!2.40e-13!169;UBERON:0006595!2.40e-13!169;UBERON:0003102!5.11e-13!95;UBERON:0000974!9.14e-12!10;UBERON:0007196!1.15e-11!14;UBERON:0001558!1.15e-11!14;UBERON:0001444!7.85e-11!48;UBERON:0003343!1.10e-10!4;UBERON:0004785!1.10e-10!4;UBERON:0000065!1.66e-10!53;UBERON:0004815!7.30e-10!3;UBERON:0002031!7.30e-10!3;UBERON:0003126!1.75e-09!7;UBERON:0001005!1.75e-09!7;UBERON:0001949!3.58e-09!3;UBERON:0001723!1.29e-08!3;UBERON:0001033!1.29e-08!3;UBERON:0010056!1.29e-08!3;UBERON:0006562!8.43e-08!11;UBERON:0002185!1.80e-07!4;UBERON:0001911!1.96e-07!4;UBERON:0005333!1.96e-07!4;UBERON:0008425!1.96e-07!4;UBERON:0005311!1.96e-07!4;UBERON:0000344!2.08e-07!12;UBERON:0001708!3.46e-07!4;UBERON:0001704!3.46e-07!4;UBERON:0001007!3.57e-07!155;UBERON:0001555!3.57e-07!155;UBERON:0007026!3.57e-07!155;UBERON:0000072!4.84e-07!46;UBERON:0001003!5.00e-07!14;UBERON:0007376!5.00e-07!14;UBERON:0007383!5.00e-07!14;UBERON:0002419!9.89e-07!2;UBERON:0007771!9.89e-07!2;UBERON:0003297!9.89e-07!2;UBERON:0001821!9.89e-07!2;UBERON:0003487!9.89e-07!2;UBERON:0001820!9.89e-07!2;UBERON:0005089!9.89e-07!2;UBERON:0005088!9.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.16e-18;3!UBERON:0002031;3.16e-18;3!UBERON:0001949;3.15e-17;3!UBERON:0001911;7.12e-14;4!UBERON:0001708;4.59e-13;4!UBERON:0008895;4.59e-13;4!UBERON:0000486;9.58e-12;12!UBERON:0002185;3.80e-11;5!UBERON:0011159;1.48e-10;5!UBERON:0007196;1.30e-09;15!UBERON:0001558;1.30e-09;15!UBERON:0004807;8.33e-09;22!UBERON:0010371;3.17e-08;31!UBERON:0005911;3.40e-08;36!UBERON:0000485;4.32e-08;7!UBERON:0003929;1.12e-07;7!UBERON:0003729;4.05e-07;13!UBERON:0000964;6.23e-07;4!UBERON:0010409;6.23e-07;4!UBERON:0005795;7.29e-07;1!UBERON:0003350;9.01e-07;8!UBERON:0001828;9.01e-07;8!UBERON:0000165;9.57e-07;28!UBERON:0001987;9.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.50e-18,3;UBERON:0002031,2.50e-18,3;UBERON:0001949,6.21e-17,3;UBERON:0003102,6.63e-15,99;UBERON:0001911,8.30e-14,4;UBERON:0005333,8.30e-14,4;UBERON:0008425,8.30e-14,4;UBERON:0005311,8.30e-14,4;UBERON:0001708,2.65e-13,4;UBERON:0008895,2.65e-13,4;UBERON:0002185,3.31e-11,5;UBERON:0011159,9.56e-11,5;UBERON:0005157,1.50e-10,47;UBERON:0000033,3.30e-10,56;UBERON:0007196,1.30e-09,15;UBERON:0001558,1.30e-09,15;UBERON:0010188,4.91e-09,6;UBERON:0002539,4.91e-09,6;UBERON:0008816,4.91e-09,6;UBERON:0000153,5.01e-09,62;UBERON:0007811,5.01e-09,62;UBERON:0005153,8.76e-09,37;UBERON:0004119,9.62e-09,160;UBERON:0000925,9.62e-09,160;UBERON:0006595,9.62e-09,160;UBERON:0001004,2.99e-07,74;UBERON:0000076,3.94e-07,8;UBERON:0003729,4.89e-07,13;UBERON:0000964,6.14e-07,4;UBERON:0010409,6.14e-07,4;UBERON:0004348,6.14e-07,4;UBERON:0005427,6.14e-07,4;UBERON:0001987,8.95e-07,4;UBERON:0004340,8.95e-07,4;UBERON:0004807,9.27e-07,28 | |||
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| ||
|short_description=p6@CU687195 | |||
}} | }} |
Latest revision as of 09:36, 24 July 2015
Short description: | p6@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CU687195_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 230bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.50e-18 | 3 |
epithelium of bronchus | 2.50e-18 | 3 |
gingival epithelium | 6.21e-17 | 3 |
surface structure | 6.63e-15 | 99 |
mammary gland | 8.30e-14 | 4 |
mammary bud | 8.30e-14 | 4 |
mammary ridge | 8.30e-14 | 4 |
mammary placode | 8.30e-14 | 4 |
jaw skeleton | 2.65e-13 | 4 |
splanchnocranium | 2.65e-13 | 4 |
bronchus | 3.31e-11 | 5 |
primary subdivision of cranial skeletal system | 9.56e-11 | 5 |
epithelial fold | 1.50e-10 | 47 |
head | 3.30e-10 | 56 |
tracheobronchial tree | 1.30e-09 | 15 |
lower respiratory tract | 1.30e-09 | 15 |
protuberance | 4.91e-09 | 6 |
pharyngeal arch | 4.91e-09 | 6 |
embryonic head | 4.91e-09 | 6 |
anterior region of body | 5.01e-09 | 62 |
craniocervical region | 5.01e-09 | 62 |
epithelial bud | 8.76e-09 | 37 |
endoderm-derived structure | 9.62e-09 | 160 |
endoderm | 9.62e-09 | 160 |
presumptive endoderm | 9.62e-09 | 160 |
respiratory system | 2.99e-07 | 74 |
external ectoderm | 3.94e-07 | 8 |
mouth mucosa | 4.89e-07 | 13 |
cornea | 6.14e-07 | 4 |
eye surface | 6.14e-07 | 4 |
optic eminence | 6.14e-07 | 4 |
corneal primordium | 6.14e-07 | 4 |
placenta | 8.95e-07 | 4 |
allantois | 8.95e-07 | 4 |
respiratory system epithelium | 9.27e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.20e-07 | 1 |
keratoacanthoma | 3.20e-07 | 1 |