FFCP PHASE1:Hg19::chr12:6346978..6347022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_CU680149_5end | |association_with_transcript=0bp_to_CU680149_5end | ||
|cluster_id=chr12:6346978..6347022,- | |||
|description=CAGE_peak_1_at_CU680149_5end | |description=CAGE_peak_1_at_CU680149_5end | ||
|id=chr12:6346978..6347022,- | |id=chr12:6346978..6347022,- | ||
|ontology_enrichment_celltype=CL:0000115;1.06e-16;36!CL:0002078;4.19e-12;45!CL:0002139;8.82e-12;24!CL:0000235;3.37e-11;6!CL:0000071;3.54e-11;18!CL:1000449;9.10e-11;15!CL:0002681;1.50e-10;12!CL:0002584;1.50e-10;12!CL:1000746;6.40e-10;7!CL:1000612;6.40e-10;7!CL:0002188;1.94e-09;5!CL:1000497;2.51e-09;17!CL:0002518;2.51e-09;17!CL:1000413;7.88e-08;9!CL:0000213;1.40e-07;58!CL:0000215;1.40e-07;58 | |ontology_enrichment_celltype=CL:0000066!4.94e-21!254;CL:0002321!1.62e-14!248;CL:0000220!2.58e-14!246;CL:0002078!4.94e-14!44;CL:0000115!7.17e-12!35;CL:0000213!5.39e-11!57;CL:0000215!5.39e-11!57;CL:0000222!5.56e-09!119;CL:0002139!3.67e-08!24;CL:1000449!2.35e-07!16;CL:0002681!3.70e-07!13;CL:0002584!3.70e-07!13;CL:1000497!9.21e-07!18;CL:0002518!9.21e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;1.06e-16;36!CL:0002078;4.19e-12;45!CL:0002139;8.82e-12;24!CL:0000235;3.37e-11;6!CL:0000071;3.54e-11;18!CL:1000449;9.10e-11;15!CL:0002681;1.50e-10;12!CL:0002584;1.50e-10;12!CL:1000746;6.40e-10;7!CL:1000612;6.40e-10;7!CL:0002188;1.94e-09;5!CL:1000497;2.51e-09;17!CL:0002518;2.51e-09;17!CL:1000413;7.88e-08;9!CL:0000213;1.40e-07;58!CL:0000215;1.40e-07;58 | ||
|ontology_enrichment_disease=DOID:0060084;5.41e-09;3!DOID:127;5.41e-09;3!DOID:0060072;7.89e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0000115,5.72e-18,36;CL:0002078,1.91e-17,45;CL:0000213,2.89e-12,58;CL:0000215,2.89e-12,58;CL:0002139,1.06e-11,24;CL:0000235,1.96e-11,6;CL:0000071,5.01e-11,18;CL:0002546,5.01e-11,18;CL:1000449,1.28e-10,15;CL:0002681,2.35e-10,12;CL:0002584,2.35e-10,12;CL:1000746,1.13e-09,7;CL:1000612,1.13e-09,7;CL:0002188,2.19e-09,5;CL:1000497,3.38e-09,17;CL:0002518,3.38e-09,17;CL:0000066,2.38e-08,253;CL:1000413,1.37e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0000353;2.70e-13;15!UBERON:0004638;3.54e-11;18!UBERON:0001986;3.54e-11;18!UBERON:0004852;3.54e-11;18!UBERON:0006555;9.10e-11;15!UBERON:0004819;9.10e-11;15!UBERON:0001285;9.10e-11;15!UBERON:0007684;9.10e-11;15!UBERON:0001225;1.50e-10;12!UBERON:0008987;1.50e-10;12!UBERON:0000074;6.40e-10;7!UBERON:0001229;6.40e-10;7!UBERON:0006914;2.09e-09;25!UBERON:0000487;8.18e-09;22!UBERON:0001851;3.24e-08;15!UBERON:0003914;6.54e-08;74!UBERON:0003915;7.88e-08;9!UBERON:0004700;7.88e-08;9!UBERON:0001917;7.88e-08;9!UBERON:0006554;2.24e-07;30!UBERON:0001008;2.24e-07;30!UBERON:0000964;8.13e-07;4!UBERON:0010409;8.13e-07;4 | |ontology_enrichment_development_v019=CL:0002546;3.54e-11;18!UBERON:0005795;9.92e-07;10 | ||
|ontology_enrichment_disease=DOID:193!8.37e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.41e-09;3!DOID:127;5.41e-09;3!DOID:0060072;7.89e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.49e-09,3;DOID:127,5.49e-09,3;DOID:0060072,7.97e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.77e-10!659;UBERON:0000480!2.52e-09!626;UBERON:0000467!3.18e-09!625;UBERON:0000922!2.69e-08!612;UBERON:0000080!2.01e-07!18;UBERON:0002120!2.01e-07!18;UBERON:0004875!2.01e-07!18;UBERON:0005721!2.01e-07!18;UBERON:0005754!2.01e-07!18;UBERON:0007297!2.01e-07!18;UBERON:0000477!2.25e-07!286;UBERON:0004211!2.35e-07!16;UBERON:0001285!2.35e-07!16;UBERON:0007684!2.35e-07!16;UBERON:0003220!2.35e-07!16;UBERON:0004208!2.35e-07!16;UBERON:0004876!2.94e-07!20;UBERON:0006555!3.17e-07!17;UBERON:0005103!3.17e-07!17;UBERON:0000083!3.17e-07!17;UBERON:0009201!3.17e-07!17;UBERON:0004819!3.17e-07!17;UBERON:0006553!3.17e-07!17;UBERON:0003074!3.17e-07!17;UBERON:0003060!3.17e-07!17;UBERON:0000055!3.63e-07!69;UBERON:0001225!3.70e-07!13;UBERON:0008987!3.70e-07!13;UBERON:0002049!4.21e-07!79;UBERON:0007798!4.21e-07!79;UBERON:0002050!4.86e-07!605;UBERON:0005423!4.86e-07!605;UBERON:0000923!6.95e-07!604;UBERON:0005291!6.95e-07!604;UBERON:0006598!6.95e-07!604;UBERON:0002532!6.95e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;2.70e-13;15!UBERON:0004638;3.54e-11;18!UBERON:0001986;3.54e-11;18!UBERON:0004852;3.54e-11;18!UBERON:0006555;9.10e-11;15!UBERON:0004819;9.10e-11;15!UBERON:0001285;9.10e-11;15!UBERON:0007684;9.10e-11;15!UBERON:0001225;1.50e-10;12!UBERON:0008987;1.50e-10;12!UBERON:0000074;6.40e-10;7!UBERON:0001229;6.40e-10;7!UBERON:0006914;2.09e-09;25!UBERON:0000487;8.18e-09;22!UBERON:0001851;3.24e-08;15!UBERON:0003914;6.54e-08;74!UBERON:0003915;7.88e-08;9!UBERON:0004700;7.88e-08;9!UBERON:0001917;7.88e-08;9!UBERON:0006554;2.24e-07;30!UBERON:0001008;2.24e-07;30!UBERON:0000964;8.13e-07;4!UBERON:0010409;8.13e-07;4 | |||
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| ||
|short_description=p1@CU680149 | |short_description=p1@CU680149 | ||
}} | }} |
Latest revision as of 11:12, 24 July 2015
Short description: | p1@CU680149 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU680149_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_CU680149_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.72e-18 | 36 |
meso-epithelial cell | 1.91e-17 | 45 |
lining cell | 2.89e-12 | 58 |
barrier cell | 2.89e-12 | 58 |
endothelial cell of vascular tree | 1.06e-11 | 24 |
macrophage | 1.96e-11 | 6 |
blood vessel endothelial cell | 5.01e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.01e-11 | 18 |
epithelial cell of nephron | 1.28e-10 | 15 |
kidney cortical cell | 2.35e-10 | 12 |
renal cortical epithelial cell | 2.35e-10 | 12 |
glomerular cell | 1.13e-09 | 7 |
kidney corpuscule cell | 1.13e-09 | 7 |
glomerular endothelial cell | 2.19e-09 | 5 |
kidney cell | 3.38e-09 | 17 |
kidney epithelial cell | 3.38e-09 | 17 |
epithelial cell | 2.38e-08 | 253 |
endothelial cell of artery | 1.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.49e-09 | 3 |
leiomyoma | 5.49e-09 | 3 |
benign neoplasm | 7.97e-07 | 4 |