FFCP PHASE1:Hg19::chr12:8800745..8800781,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:8800745..8800781,-
|short_description=p@chr12:8800745..8800781,-
|description=CAGE_peak_at_chr12:8800745..8800781,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:8800745..8800781,- | |||
|coexpression_cluster_id=C628 | |||
|description=CAGE_peak_at_chr12:8800745..8800781,- | |||
|id=chr12:8800745..8800781,- | |||
|ontology_enrichment_celltype=CL:0002334!8.94e-11!12;CL:0000136!3.21e-10!15;CL:0000057!4.08e-10!75;CL:0000055!2.82e-08!180;CL:0002620!8.59e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.33e-15;12!CL:0000136;1.54e-14;13!CL:1000306;6.31e-10;4!CL:0002547;6.31e-10;4!CL:0002615;9.41e-09;3!CL:0002579;1.84e-08;3!CL:0002580;2.23e-08;3!CL:0000135;3.16e-08;3!CL:0000388;3.16e-08;3!CL:0002541;5.63e-08;3!CL:0002521;5.70e-08;3!CL:0002595;2.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.88e-18,15;CL:0002334,4.22e-15,12;CL:0000057,3.15e-12,76;CL:1000306,5.79e-10,4;CL:0002547,5.79e-10,4;CL:0002615,9.44e-09,3;CL:0002579,1.78e-08,3;CL:0002580,2.32e-08,3;CL:0000135,3.02e-08,3;CL:0000388,3.02e-08,3;CL:0002521,5.21e-08,3;CL:0002541,5.46e-08,3;CL:0002595,1.73e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.50e-09!14;UBERON:0000158!1.50e-09!14;UBERON:0002199!9.97e-09!45;UBERON:0002416!9.97e-09!45;UBERON:0003688!2.17e-08!6;UBERON:0002358!2.17e-08!6;UBERON:0003684!2.17e-08!6;UBERON:0001178!2.17e-08!6;UBERON:0003124!5.14e-08!7;UBERON:0001013!5.16e-08!14;UBERON:0004923!6.11e-08!57;UBERON:0001737!1.65e-07!9;UBERON:0004872!3.05e-07!84;UBERON:0001637!3.98e-07!42;UBERON:0003509!3.98e-07!42;UBERON:0004572!3.98e-07!42;UBERON:0004573!7.01e-07!33;UBERON:0004571!7.01e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.23e-17;9!UBERON:0000042;1.23e-17;9!UBERON:0003688;1.59e-15;6!UBERON:0002358;1.59e-15;6!UBERON:0003684;1.59e-15;6!UBERON:0001178;1.59e-15;6!UBERON:0001013;6.29e-10;14!UBERON:0004797;6.31e-10;4!UBERON:0000415;6.31e-10;4!UBERON:0007240;6.31e-10;4!UBERON:0005742;6.31e-10;4!UBERON:0005734;6.31e-10;4!UBERON:0004664;6.31e-10;4!UBERON:0004663;6.31e-10;4!UBERON:0007846;3.16e-08;3!UBERON:0000043;3.16e-08;3!UBERON:0007845;3.16e-08;3!UBERON:0003124;5.63e-08;3!UBERON:0000920;5.63e-08;3!UBERON:0002190;5.70e-08;3!UBERON:0005631;6.87e-08;10!UBERON:0000158;6.87e-08;10!UBERON:0002072;6.99e-08;5!UBERON:0003834;2.24e-07;5!UBERON:0001533;2.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.55e-15,6;UBERON:0002358,1.55e-15,6;UBERON:0003684,1.55e-15,6;UBERON:0001178,1.55e-15,6;UBERON:0004457,8.81e-13,12;UBERON:0000042,8.81e-13,12;UBERON:0001013,5.51e-10,14;UBERON:0000415,5.79e-10,4;UBERON:0007240,5.79e-10,4;UBERON:0005742,5.79e-10,4;UBERON:0005734,5.79e-10,4;UBERON:0004664,5.79e-10,4;UBERON:0004663,5.79e-10,4;UBERON:0005631,1.76e-09,14;UBERON:0000158,1.76e-09,14;UBERON:0004923,1.79e-09,66;UBERON:0003124,2.05e-08,7;UBERON:0007846,3.02e-08,3;UBERON:0000043,3.02e-08,3;UBERON:0007845,3.02e-08,3;UBERON:0002190,5.21e-08,3;UBERON:0000920,5.46e-08,3;UBERON:0002072,6.64e-08,5;UBERON:0003834,1.73e-07,5;UBERON:0001533,1.73e-07,5;UBERON:0004573,3.22e-07,33;UBERON:0004571,3.22e-07,33;UBERON:0002199,3.80e-07,46;UBERON:0002416,3.80e-07,46 | |||
|phase1_expression=13.8075568245623,9.84862409898522,16.4916652792286,21.0153926541574,21.4541325325098,34.8935409640147,30.3959853801973,2.52687949370732,3.91778442299758,0,0,0.655324116390517,0.263766978228454,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4182426957736,5.44511200157693,1.45650098894541,22.9469296599051,4.965357350777,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,3.58779271377724,3.63047560991565,1.48352330811693,0.900273288253207,0.412210116953756,2.31876486041066,1.48893485065272,1.0126579934476,1.94874010322397,1.00973509697646,0.460249493211497,0.80823028409406,2.13005755509969,0.806016785821122,0.339121184620975,0.773043412653187,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.709840800239063,0.842923450390509,0.482022059766964,0.661763836394364,1.08939722046203,0.474541238222193,0.808987848960987,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,1.29964888536674,0,0,0,0.239624855491583,0,0,1.01346914667305,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.902838299183157,4.5481500811197,9.31257641632544,0,0,0,0,0,0,0,0,0.909382714338778,3.32870879020994,3.0239029332968,12.4053903909388,5.52463103837025,10.3844234940237,10.7636885374789,7.67560873600055,13.9942911394939,5.93672265779964,0.771048469013278,2.48586415438378,0.492762936082855,0,1.39452454151951,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0.650060246036521,8.03419649220798,0.48335359146061,0,0,0,0,0,0,0.356128142586949,0,0,0,0,1.39453664789186,11.6480568327337,0,0.616067160352178,0.532306030317022,0,0.74129687641568,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,4.87426979262569,0,0,0,2.26016233240486,1.65409603063837,2.65375590096488,2.63070531152258,0,0,0,0.92947049429925,0.845086807596724,0,0,0,0,9.28873595309722,13.8303855043159,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,1.90995587790152,6.23625829748541,2.45728561679386,0,0,0,0,0,1.19548792950642,0,0,0.20453736500431,0,2.79935628895627,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0.113942055847001,0.46112780877612,2.78248697670294,0.977826347298073,3.82801391678303,4.1218917030838,7.99552164027952,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.530745387020035,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.347119476670262,0,0,1.57254001417827,1.37588825977293,0.483781656445426,0.511625219603299,0.328461828212837,0.387956065953678,0,0.225980740780532,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,1.99679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,2.71499800876856,0.864221491201268,1.95952416065645,0,0,3.74853647927928,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,2.77402930751307,0,0.251567901752575,0,2.05956061557231,1.05861646634267,0.15543720058278,0.443565449968902,0.477890301491107,0,0,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,1.20008329398946,5.83772698810748,4.71449284272287,0,0,0,0,0,0,0,0,2.77921302444875,1.09642024789354,0.530067437837643,0.38582807654183,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0.40341013740704,0,3.40478702825849,0,0,0,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,1.23040974977572,0,0,0,0.205325613712494,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0,0,3.0586880643807,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,5.57992527250127,6.47045880083986,9.95041092884715,0.126166424835079,0,0,0.101988829741982,0,0,0,0.227336094654718,0.267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| ||
|short_description=p@chr12:8800745..8800781,- | |||
}} | }} |
Latest revision as of 13:09, 24 July 2015
Short description: | p@chr12:8800745..8800781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:8800745..8800781, - |
Coexpression cluster: | C628_Adipocyte_Preadipocyte_Fibroblast_tenocyte_Smooth_Placental_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.88e-18 | 15 |
preadipocyte | 4.22e-15 | 12 |
fibroblast | 3.15e-12 | 76 |
fibroblast of tunica adventitia of artery | 5.79e-10 | 4 |
fibroblast of the aortic adventitia | 5.79e-10 | 4 |
adipocyte of omentum tissue | 9.44e-09 | 3 |
omentum preadipocyte | 1.78e-08 | 3 |
preadipocyte of the breast | 2.32e-08 | 3 |
fibrocyte | 3.02e-08 | 3 |
tendon cell | 3.02e-08 | 3 |
subcutaneous fat cell | 5.21e-08 | 3 |
chorionic membrane mesenchymal stem cell | 5.46e-08 | 3 |
smooth muscle cell of the subclavian artery | 1.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.55e-15 | 6 |
peritoneum | 1.55e-15 | 6 |
abdominal cavity | 1.55e-15 | 6 |
visceral peritoneum | 1.55e-15 | 6 |
cavity lining | 8.81e-13 | 12 |
serous membrane | 8.81e-13 | 12 |
adipose tissue | 5.51e-10 | 14 |
artery wall | 5.79e-10 | 4 |
tunica adventitia of artery | 5.79e-10 | 4 |
adventitia | 5.79e-10 | 4 |
tunica adventitia of blood vessel | 5.79e-10 | 4 |
aorta tunica adventitia | 5.79e-10 | 4 |
aorta wall | 5.79e-10 | 4 |
extraembryonic membrane | 1.76e-09 | 14 |
membranous layer | 1.76e-09 | 14 |
organ component layer | 1.79e-09 | 66 |
chorion | 2.05e-08 | 7 |
dense regular connective tissue | 3.02e-08 | 3 |
tendon | 3.02e-08 | 3 |
regular connective tissue | 3.02e-08 | 3 |
subcutaneous adipose tissue | 5.21e-08 | 3 |
egg chorion | 5.46e-08 | 3 |
hypodermis | 6.64e-08 | 5 |
thoracic segment blood vessel | 1.73e-07 | 5 |
subclavian artery | 1.73e-07 | 5 |
systemic artery | 3.22e-07 | 33 |
systemic arterial system | 3.22e-07 | 33 |
integument | 3.80e-07 | 46 |
integumental system | 3.80e-07 | 46 |