FFCP PHASE1:Hg19::chr12:91498004..91498039,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:91498004..91498039,-
|short_description=p@chr12:91498004..91498039,-
|description=CAGE_peak_at_chr12:91498004..91498039,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:91498004..91498039,- | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_at_chr12:91498004..91498039,- | |||
|id=chr12:91498004..91498039,- | |||
|ontology_enrichment_celltype=CL:0000153!3.47e-08!9;CL:0000447!3.47e-08!9;CL:0000055!9.93e-08!180;CL:0002620!1.83e-07!23;CL:0000057!8.23e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.31e-14;9!CL:0000447;1.31e-14;9!CL:0000499;6.29e-10;28!CL:0000135;8.89e-10;3!CL:0000388;8.89e-10;3!CL:0000214;8.82e-09;3!CL:0002579;1.90e-08;3!CL:0000327;2.67e-08;15!CL:0000138;5.19e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.54e-14,9;CL:0000447,1.54e-14,9;CL:0000499,7.71e-10,28;CL:0000135,9.08e-10,3;CL:0000388,9.08e-10,3;CL:0000214,1.21e-08,3;CL:0000327,2.94e-08,15;CL:0002579,2.94e-08,3;CL:0000058,4.86e-08,6;CL:0000138,4.86e-08,6;CL:0000136,5.92e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0003688!4.10e-07!6;UBERON:0002358!4.10e-07!6;UBERON:0003684!4.10e-07!6;UBERON:0001178!4.10e-07!6;UBERON:0004923!5.97e-07!57;UBERON:0004457!7.15e-07!12;UBERON:0000042!7.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.25e-18;9!UBERON:0000042;7.25e-18;9!UBERON:0003688;6.03e-11;6!UBERON:0002358;6.03e-11;6!UBERON:0003684;6.03e-11;6!UBERON:0001178;6.03e-11;6!UBERON:0007846;8.89e-10;3!UBERON:0000043;8.89e-10;3!UBERON:0007845;8.89e-10;3!UBERON:0006915;8.82e-09;3!UBERON:0007616;8.82e-09;3!UBERON:0002217;8.82e-09;3!UBERON:0002018;8.82e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.06e-12,12;UBERON:0000042,1.06e-12,12;UBERON:0003688,1.24e-10,6;UBERON:0002358,1.24e-10,6;UBERON:0003684,1.24e-10,6;UBERON:0001178,1.24e-10,6;UBERON:0007846,9.08e-10,3;UBERON:0000043,9.08e-10,3;UBERON:0007845,9.08e-10,3;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3;UBERON:0004923,1.34e-07,66 | |||
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| ||
|short_description=p@chr12:91498004..91498039,- | |||
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Latest revision as of 13:28, 24 July 2015
Short description: | p@chr12:91498004..91498039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91498004..91498039, - |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.54e-14 | 9 |
carbohydrate secreting cell | 1.54e-14 | 9 |
stromal cell | 7.71e-10 | 28 |
fibrocyte | 9.08e-10 | 3 |
tendon cell | 9.08e-10 | 3 |
synovial cell | 1.21e-08 | 3 |
extracellular matrix secreting cell | 2.94e-08 | 15 |
omentum preadipocyte | 2.94e-08 | 3 |
chondroblast | 4.86e-08 | 6 |
chondrocyte | 4.86e-08 | 6 |
fat cell | 5.92e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.06e-12 | 12 |
serous membrane | 1.06e-12 | 12 |
omentum | 1.24e-10 | 6 |
peritoneum | 1.24e-10 | 6 |
abdominal cavity | 1.24e-10 | 6 |
visceral peritoneum | 1.24e-10 | 6 |
dense regular connective tissue | 9.08e-10 | 3 |
tendon | 9.08e-10 | 3 |
regular connective tissue | 9.08e-10 | 3 |
stratified squamous epithelium | 1.21e-08 | 3 |
layer of synovial tissue | 1.21e-08 | 3 |
synovial joint | 1.21e-08 | 3 |
synovial membrane of synovial joint | 1.21e-08 | 3 |
organ component layer | 1.34e-07 | 66 |