FFCP PHASE1:Hg19::chr12:96896680..96896696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96896680..96896696,+ | |||
|description=CAGE_peak_at_chr12:96896680..96896696,+ | |description=CAGE_peak_at_chr12:96896680..96896696,+ | ||
|id=chr12:96896680..96896696,+ | |id=chr12:96896680..96896696,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.25e-08!24;CL:0000826!2.25e-08!24 | |ontology_enrichment_celltype=CL:0000945!2.25e-08!24;CL:0000826!2.25e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;4.72e-17;1!CL:0000786;4.72e-17;1!CL:0000945;7.05e-16;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.72e-17,1;CL:0000786,4.72e-17,1;CL:0000980,4.72e-17,1;CL:0000945,8.51e-16,24;CL:0000826,8.51e-16,24;CL:0000785,3.43e-09,2;CL:0000955,3.43e-09,2;CL:0000818,3.43e-09,2;CL:0000954,3.43e-09,2;CL:0000816,3.43e-09,2;CL:0000838,2.71e-07,52;CL:0000542,3.72e-07,53;CL:0000051,3.72e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.53e-17;1!CL:0000954;3.43e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.93e-16;1!DOID:0050177;1.93e-16;1!DOID:0050427;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.63e-16,1;DOID:0050177,2.63e-16,1;DOID:0050427,2.63e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-19!115;UBERON:0001255!2.20e-07!2;UBERON:0001556!2.20e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.86e-19!115;UBERON:0001255!2.20e-07!2;UBERON:0001556!2.20e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.53e-17;1!UBERON:0001153;5.53e-17;1!UBERON:0009854;5.53e-17;1!UBERON:0002372;7.00e-17;1!UBERON:0001961;7.00e-17;1!UBERON:0001744;7.00e-17;1!UBERON:0001042;7.00e-17;1!UBERON:0001735;7.00e-17;1!UBERON:0003127;4.18e-09;2!UBERON:0006562;4.18e-09;2!UBERON:0000341;4.88e-09;2!UBERON:0001155;8.89e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.53e-17,1;UBERON:0001153,5.53e-17,1;UBERON:0001045,5.53e-17,1;UBERON:0002372,6.47e-17,1;UBERON:0001961,6.47e-17,1;UBERON:0001744,6.47e-17,1;UBERON:0001735,6.47e-17,1;UBERON:0003127,4.34e-09,2;UBERON:0000341,4.70e-09,2;UBERON:0001155,8.60e-08,9 | |||
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| ||
|short_description=p@chr12:96896680..96896696,+ | |short_description=p@chr12:96896680..96896696,+ | ||
}} | }} |
Latest revision as of 13:56, 24 July 2015
Short description: | p@chr12:96896680..96896696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96896680..96896696, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.72e-17 | 1 |
plasma cell | 4.72e-17 | 1 |
plasmablast | 4.72e-17 | 1 |
lymphocyte of B lineage | 8.51e-16 | 24 |
pro-B cell | 8.51e-16 | 24 |
mature B cell | 3.43e-09 | 2 |
pre-B-II cell | 3.43e-09 | 2 |
transitional stage B cell | 3.43e-09 | 2 |
small pre-B-II cell | 3.43e-09 | 2 |
immature B cell | 3.43e-09 | 2 |
lymphoid lineage restricted progenitor cell | 2.71e-07 | 52 |
lymphocyte | 3.72e-07 | 53 |
common lymphoid progenitor | 3.72e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.53e-17 | 1 |
caecum | 5.53e-17 | 1 |
midgut | 5.53e-17 | 1 |
tonsil | 6.47e-17 | 1 |
mucosa-associated lymphoid tissue | 6.47e-17 | 1 |
lymphoid tissue | 6.47e-17 | 1 |
tonsillar ring | 6.47e-17 | 1 |
open tracheal system trachea | 4.34e-09 | 2 |
throat | 4.70e-09 | 2 |
colon | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.63e-16 | 1 |
monogenic disease | 2.63e-16 | 1 |
xeroderma pigmentosum | 2.63e-16 | 1 |