FFCP PHASE1:Hg19::chr13:38143907..38143931,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:38143907..38143931,+ to FFCP PHASE1:Hg19::chr13:38143907..38143931,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:38143907..38143931,+ | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr13:38143907..38143931,+ | |||
|id=chr13:38143907..38143931,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.87e-22!75;CL:0000055!5.33e-21!180;CL:0002334!1.75e-17!12;CL:0000723!6.84e-10!436;CL:0000048!7.33e-10!430;CL:0000034!2.61e-09!444;CL:0002620!2.32e-08!23;CL:0000680!6.26e-08!57;CL:0000056!6.26e-08!57;CL:0000355!6.26e-08!57;CL:0002570!2.35e-07!8;CL:0002494!3.35e-07!16;CL:0000187!5.49e-07!54;CL:0002580!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.88e-28;12!CL:0002580;1.28e-17;3!CL:0002579;3.81e-17;3!CL:0000197;7.89e-09;6!CL:0000098;7.89e-09;6!CL:0002167;7.89e-09;6!CL:0000135;2.69e-08;3!CL:0000388;2.69e-08;3!CL:0002557;7.77e-07;1!CL:0002568;7.77e-07;1!CL:0002570;9.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.65e-29,12;CL:0002580,5.80e-18,3;CL:0002579,1.91e-17,3;CL:0000057,1.97e-11,76;CL:0000197,6.28e-09,6;CL:0000098,6.28e-09,6;CL:0002167,6.28e-09,6;CL:0000135,1.86e-08,3;CL:0000388,1.86e-08,3;CL:0002557,5.37e-07,1;CL:0002568,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-07;1!UBERON:0003099;7.77e-07;1!UBERON:0003852;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;1.20e-08;3!DOID:3369;2.22e-07;1!DOID:4235;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.02e-08,3;DOID:3369,2.22e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.64e-07!61;UBERON:0002036!4.64e-07!61;UBERON:0003082!4.64e-07!61;UBERON:0000914!7.66e-07!83;UBERON:0002329!7.66e-07!83;UBERON:0003077!7.66e-07!83;UBERON:0003059!7.66e-07!83;UBERON:0007282!7.66e-07!83;UBERON:0009618!7.66e-07!83;UBERON:0007285!7.66e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.89e-09;6!UBERON:0002358;7.89e-09;6!UBERON:0003684;7.89e-09;6!UBERON:0001178;7.89e-09;6!UBERON:0007846;2.69e-08;3!UBERON:0000043;2.69e-08;3!UBERON:0007845;2.69e-08;3!UBERON:0003104;1.24e-07;7!UBERON:0009142;1.24e-07;7!UBERON:0005705;7.77e-07;1!UBERON:0008193;7.77e-07;1!UBERON:0010912;7.77e-07;1!UBERON:0002514;7.77e-07;1!UBERON:0003457;7.77e-07;1!UBERON:0008907;7.77e-07;1!UBERON:0008001;7.77e-07;1!UBERON:0007213;7.77e-07;1!UBERON:0009891;7.77e-07;1!UBERON:0007914;7.77e-07;1!UBERON:0007375;7.77e-07;1!UBERON:0003323;7.77e-07;1!UBERON:0010258;7.77e-07;1!UBERON:0005253;7.77e-07;1!UBERON:0007842;7.77e-07;1!UBERON:0002397;7.77e-07;1!UBERON:0003113;7.77e-07;1!UBERON:0003277;7.77e-07;1!UBERON:0001709;7.77e-07;1!UBERON:0002244;7.77e-07;1!UBERON:0005620;7.77e-07;1!UBERON:0010364;7.77e-07;1!UBERON:0004288;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.63e-09,6;UBERON:0002358,5.63e-09,6;UBERON:0003684,5.63e-09,6;UBERON:0001178,5.63e-09,6;UBERON:0007846,1.86e-08,3;UBERON:0000043,1.86e-08,3;UBERON:0007845,1.86e-08,3;UBERON:0005705,4.78e-07,1;UBERON:0008193,4.78e-07,1;UBERON:0010912,4.78e-07,1;UBERON:0002514,4.78e-07,1;UBERON:0003457,4.78e-07,1;UBERON:0008907,4.78e-07,1;UBERON:0008001,4.78e-07,1;UBERON:0007213,4.78e-07,1;UBERON:0009891,4.78e-07,1;UBERON:0007914,4.78e-07,1;UBERON:0009292,4.78e-07,1;UBERON:0003099,4.78e-07,1;UBERON:0007375,4.78e-07,1;UBERON:0003323,4.78e-07,1;UBERON:0010258,4.78e-07,1;UBERON:0007842,4.78e-07,1;UBERON:0009494,4.78e-07,1;UBERON:0010042,4.78e-07,1;UBERON:0010045,4.78e-07,1;UBERON:0010259,4.78e-07,1;UBERON:0010359,4.78e-07,1;UBERON:0009526,4.78e-07,1;UBERON:0002397,4.78e-07,1;UBERON:0003113,4.78e-07,1;UBERON:0003277,4.78e-07,1;UBERON:0001709,4.78e-07,1;UBERON:0004066,4.78e-07,1;UBERON:0002244,4.78e-07,1;UBERON:0005620,4.78e-07,1;UBERON:0004362,4.78e-07,1;UBERON:0010364,4.78e-07,1;UBERON:0010046,4.78e-07,1;UBERON:0005868,4.78e-07,1;UBERON:0007238,4.78e-07,1;UBERON:0004288,4.78e-07,1;UBERON:0004068,4.78e-07,1;UBERON:0010334,4.78e-07,1;UBERON:0003852,4.78e-07,1;UBERON:0010253,4.78e-07,1 | |||
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| ||
|short_description=p@chr13:38143907..38143931,+ | |||
}} | }} |
Latest revision as of 15:52, 24 July 2015
Short description: | p@chr13:38143907..38143931, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38143907..38143931, + |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.65e-29 | 12 |
preadipocyte of the breast | 5.80e-18 | 3 |
omentum preadipocyte | 1.91e-17 | 3 |
fibroblast | 1.97e-11 | 76 |
receptor cell | 6.28e-09 | 6 |
sensory epithelial cell | 6.28e-09 | 6 |
olfactory epithelial cell | 6.28e-09 | 6 |
fibrocyte | 1.86e-08 | 3 |
tendon cell | 1.86e-08 | 3 |
fibroblast of pulmonary artery | 5.37e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.02e-08 | 3 |
peripheral primitive neuroectodermal tumor | 2.22e-07 | 1 |