FFCP PHASE1:Hg19::chr13:44990601..44990610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:44990601..44990610,- | |||
|coexpression_cluster_id=C400 | |||
|description=CAGE_peak_at_chr13:44990601..44990610,- | |description=CAGE_peak_at_chr13:44990601..44990610,- | ||
|id=chr13:44990601..44990610,- | |id=chr13:44990601..44990610,- | ||
|ontology_enrichment_celltype=CL:0000064!3.48e-12!3;CL:0005012!3.48e-12!3;CL:0000067!3.48e-12!3;CL:0002304!3.48e-12!3;CL:0000763!6.81e-12!112;CL:0000049!6.81e-12!112;CL:0000037!1.26e-07!172;CL:0000566!1.26e-07!172;CL:0002274!1.39e-07!5;CL:0000457!1.39e-07!5;CL:0002191!1.39e-07!5;CL:0000097!1.39e-07!5;CL:0000831!1.39e-07!5;CL:0002028!1.39e-07!5;CL:0000988!6.44e-07!182 | |ontology_enrichment_celltype=CL:0000064!3.48e-12!3;CL:0005012!3.48e-12!3;CL:0000067!3.48e-12!3;CL:0002304!3.48e-12!3;CL:0000763!6.81e-12!112;CL:0000049!6.81e-12!112;CL:0000037!1.26e-07!172;CL:0000566!1.26e-07!172;CL:0002274!1.39e-07!5;CL:0000457!1.39e-07!5;CL:0002191!1.39e-07!5;CL:0000097!1.39e-07!5;CL:0000831!1.39e-07!5;CL:0002028!1.39e-07!5;CL:0000988!6.44e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0002032;3.67e-23;1!CL:0000557;3.67e-23;1!CL:0000763;8.30e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.97e-10,108;CL:0000049,7.97e-10,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.93e-09!31;DOID:1240!3.72e-07!39 | |ontology_enrichment_disease=DOID:8692!1.93e-09!31;DOID:1240!3.72e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.13e-25;31!DOID:1240;5.34e-16;39!DOID:2531;2.13e-10;51!DOID:0060083;2.13e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.08e-25,31;DOID:1240,1.87e-20,39;DOID:2531,1.15e-15,51;DOID:0060083,1.15e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0000488!7.76e-16!4;UBERON:0003075!4.83e-14!86;UBERON:0007284!4.83e-14!86;UBERON:0002346!3.29e-13!90;UBERON:0001049!6.55e-13!57;UBERON:0005068!6.55e-13!57;UBERON:0006241!6.55e-13!57;UBERON:0007135!6.55e-13!57;UBERON:0002616!2.32e-12!59;UBERON:0001778!3.48e-12!3;UBERON:0001775!3.48e-12!3;UBERON:0002298!9.87e-12!8;UBERON:0000988!1.66e-11!3;UBERON:0004733!6.61e-11!12;UBERON:0002028!6.61e-11!12;UBERON:0007277!6.61e-11!12;UBERON:0002203!1.37e-10!6;UBERON:0001768!1.37e-10!6;UBERON:0003056!2.82e-10!61;UBERON:0004732!5.09e-10!13;UBERON:0000955!6.75e-10!69;UBERON:0006238!6.75e-10!69;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0000153!1.13e-08!129;UBERON:0007811!1.13e-08!129;UBERON:0003076!1.34e-08!15;UBERON:0003057!1.34e-08!15;UBERON:0005743!2.12e-08!86;UBERON:0000033!2.50e-08!123;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2;UBERON:0001017!7.75e-08!82;UBERON:0002021!1.99e-07!5;UBERON:0007023!2.46e-07!115;UBERON:0002791!2.57e-07!33;UBERON:0000073!2.74e-07!94;UBERON:0001016!2.74e-07!94;UBERON:0002780!4.35e-07!41;UBERON:0001890!4.35e-07!41;UBERON:0006240!4.35e-07!41;UBERON:0002619!4.44e-07!22;UBERON:0001893!4.58e-07!34;UBERON:0003080!6.99e-07!42 | |ontology_enrichment_uberon=UBERON:0000488!7.76e-16!4;UBERON:0003075!4.83e-14!86;UBERON:0007284!4.83e-14!86;UBERON:0002346!3.29e-13!90;UBERON:0001049!6.55e-13!57;UBERON:0005068!6.55e-13!57;UBERON:0006241!6.55e-13!57;UBERON:0007135!6.55e-13!57;UBERON:0002616!2.32e-12!59;UBERON:0001778!3.48e-12!3;UBERON:0001775!3.48e-12!3;UBERON:0002298!9.87e-12!8;UBERON:0000988!1.66e-11!3;UBERON:0004733!6.61e-11!12;UBERON:0002028!6.61e-11!12;UBERON:0007277!6.61e-11!12;UBERON:0002203!1.37e-10!6;UBERON:0001768!1.37e-10!6;UBERON:0003056!2.82e-10!61;UBERON:0004732!5.09e-10!13;UBERON:0000955!6.75e-10!69;UBERON:0006238!6.75e-10!69;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0000153!1.13e-08!129;UBERON:0007811!1.13e-08!129;UBERON:0003076!1.34e-08!15;UBERON:0003057!1.34e-08!15;UBERON:0005743!2.12e-08!86;UBERON:0000033!2.50e-08!123;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2;UBERON:0001017!7.75e-08!82;UBERON:0002021!1.99e-07!5;UBERON:0007023!2.46e-07!115;UBERON:0002791!2.57e-07!33;UBERON:0000073!2.74e-07!94;UBERON:0001016!2.74e-07!94;UBERON:0002780!4.35e-07!41;UBERON:0001890!4.35e-07!41;UBERON:0006240!4.35e-07!41;UBERON:0002619!4.44e-07!22;UBERON:0001893!4.58e-07!34;UBERON:0003080!6.99e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.26e-08;3!UBERON:0005290;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3 | |||
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| ||
|short_description=p@chr13:44990601..44990610,- | |short_description=p@chr13:44990601..44990610,- | ||
}} | }} |
Latest revision as of 16:12, 24 July 2015
Short description: | p@chr13:44990601..44990610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:44990601..44990610, - |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.97e-10 | 108 |
common myeloid progenitor | 7.97e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.40e-08 | 3 |
myelencephalon | 1.40e-08 | 3 |
future myelencephalon | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.08e-25 | 31 |
leukemia | 1.87e-20 | 39 |
hematologic cancer | 1.15e-15 | 51 |
immune system cancer | 1.15e-15 | 51 |