FFCP PHASE1:Hg19::chr13:45289884..45289918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:45289884..45289918,- | |||
|description=CAGE_peak_at_chr13:45289884..45289918,- | |description=CAGE_peak_at_chr13:45289884..45289918,- | ||
|id=chr13:45289884..45289918,- | |id=chr13:45289884..45289918,- | ||
|ontology_enrichment_celltype=CL:0000057!1.54e-26!75;CL:0000055!4.76e-21!180;CL:0002620!1.48e-17!23;CL:0002334!3.27e-11!12;CL:0000188!5.52e-08!9;CL:0002551!2.01e-07!6;CL:0002556!2.87e-07!6 | |ontology_enrichment_celltype=CL:0000057!1.54e-26!75;CL:0000055!4.76e-21!180;CL:0002620!1.48e-17!23;CL:0002334!3.27e-11!12;CL:0000188!5.52e-08!9;CL:0002551!2.01e-07!6;CL:0002556!2.87e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.72e-26;23!CL:0000057;1.07e-17;73!CL:0002551;8.50e-15;6!CL:0002556;5.65e-14;6!CL:0002334;8.92e-14;12!CL:0002552;9.48e-13;5!CL:0002559;3.84e-08;5!CL:0002582;1.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.22e-37,76;CL:0002620,5.50e-26,23;CL:0002551,6.55e-15,6;CL:0002556,1.47e-14,6;CL:0002334,5.51e-14,12;CL:0002552,1.62e-12,5;CL:0002559,4.04e-08,5;CL:0000048,8.94e-08,427;CL:0002582,9.08e-08,3;CL:0000134,1.09e-07,354;CL:0000723,1.85e-07,433;CL:0002320,2.74e-07,361;CL:0000034,4.69e-07,441;CL:0000219,8.72e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.14e-08;5!DOID:450;4.14e-08;5!DOID:66;4.14e-08;5!DOID:423;4.14e-08;5!DOID:0080000;4.14e-08;5!DOID:11722;4.14e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.14e-08,5;DOID:450,5.14e-08,5;DOID:66,5.14e-08,5;DOID:423,5.14e-08,5;DOID:0080000,5.14e-08,5;DOID:11722,5.14e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!9.36e-24!95;UBERON:0002199!4.97e-19!45;UBERON:0002416!4.97e-19!45;UBERON:0002097!2.46e-17!40;UBERON:0000475!5.92e-12!365;UBERON:0000914!8.80e-10!83;UBERON:0002329!8.80e-10!83;UBERON:0003077!8.80e-10!83;UBERON:0003059!8.80e-10!83;UBERON:0007282!8.80e-10!83;UBERON:0009618!8.80e-10!83;UBERON:0007285!8.80e-10!83;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0002067!1.00e-07!9;UBERON:0004016!1.00e-07!9;UBERON:0010083!1.00e-07!9;UBERON:0001758!2.87e-07!6;UBERON:0003672!2.87e-07!6;UBERON:0002100!5.91e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.98e-23;41!UBERON:0002199;5.74e-19;46!UBERON:0002416;5.74e-19;46!UBERON:0003102;1.75e-17;50!UBERON:0002067;3.17e-16;9!UBERON:0001758;5.65e-14;6!UBERON:0003672;5.65e-14;6!UBERON:0003129;7.31e-12;7!UBERON:0000165;1.59e-11;28!UBERON:0002073;3.84e-08;5!UBERON:0001828;8.85e-08;8!UBERON:0004923;2.06e-07;55!UBERON:0011137;2.95e-07;11!UBERON:0010323;2.95e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.36e-30,41;UBERON:0003102,2.31e-29,99;UBERON:0002199,3.22e-28,46;UBERON:0002416,3.22e-28,46;UBERON:0002067,2.66e-16,9;UBERON:0004016,2.66e-16,9;UBERON:0010083,2.66e-16,9;UBERON:0001758,1.47e-14,6;UBERON:0003672,1.47e-14,6;UBERON:0003129,2.35e-12,7;UBERON:0000165,3.29e-11,29;UBERON:0000930,3.29e-11,29;UBERON:0004923,2.46e-08,66;UBERON:0002073,4.04e-08,5;UBERON:0005086,4.04e-08,5;UBERON:0001828,1.22e-07,8;UBERON:0010323,1.49e-07,11;UBERON:0001444,2.58e-07,49;UBERON:0002384,3.35e-07,371 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.986680828671798,2.00146596706261,1.78784437770915,5.23403114460221,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0.937285727335186,19.0417646866496,3.4228309292667,15.9910088190427,1.40921398372518,1.78060238804945,2.10676210053373,9.59524604897998,2.33385202892359,4.13303124703062,1.18800285728205,2.22540236350701,0,0.718618141816238,2.35670559535693,1.62654075833553,4.15596173226274,1.75591048352335,2.45190236639216,1.95309476578576,0,2.33206526395521,2.98980344345994,2.33125091275518,0.300091096084402,1.13357782162283,2.31876486041066,1.30281799432113,1.35021065793013,0.487185025805993,2.27190396819703,2.76149695926898,0.323292113637624,1.06502877754984,1.30977727695932,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,8.35862270457562,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0.402115889646523,0.370353780634118,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0,0,1.62868092146868,0,0,0.602878754119172,0,0,0,0,0,0,0,2.85273810081437,1.30303176000821,0.61642896765115,3.76028022803781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,1.45579603071565,1.60586089917446,2.20783381047509,1.05427273493442,0.300946099727719,0,1.03473071292505,0,0.368738337083406,1.82455590382974,0.195801157462741,0.343143423810856,0,0,0,0,0,0.907170879989041,2.48107807818777,0.920771839728375,1.12264037773229,1.28139149255701,1.53512174720011,0.64341568457443,1.48418066444991,0.925258162815933,1.9531789784444,1.72467027628999,2.07701771673448,1.62694529843943,0,1.00253235151642,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.54941678891006,1.07262349896764,1.72279661398852,0,0,0.676695028044854,0.770243085573222,1.5350367472613,1.7918754422989,0.966782203814463,0.725083469571143,1.19317278382541,0.445160178233687,0.495854746082934,0.384380134730212,0.255225424989168,0,1.39453664789186,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0.354761064070598,0,0.987884678879706,1.51789269506286,0.349934720244983,0.384888450902048,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,2.36387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0.384751292518985,1.25336261431701,0.46112780877612,1.07709173291727,0,2.55200927785536,0.732780747214898,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,6.31228986788641,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0.693373365065693,0.173559738335131,0,0,0,0.343972064943233,0.19351266257817,0.146178634172371,0.246346371159628,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951329442515298,1.04602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0.170388021785422,0.79318464064088,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.37494122388632,0,0,0,0,0,0.447764408660622,0.233713309847224,1.66441758450784,0.568209015825267,0.754703705257725,0.889811221596536,1.14420034198462,0.907385542579434,0.777186002913902,0,0.159296767163702,0,0.155262956876259,0,0.797525143673985,0.521745061811734,0.300515217994437,2.66563648518157,0,0.181848659202559,0,0.464033759878494,0,3.20022211730523,0.686791410365586,0,0,0.57785949122191,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,4.58653788384978,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0.381382095467167,0,0.198916222116275,0,0.80682027481408,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.91064876540519,0.709618961301111,0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| ||
|short_description=p@chr13:45289884..45289918,- | |short_description=p@chr13:45289884..45289918,- | ||
}} | }} |
Latest revision as of 16:13, 24 July 2015
Short description: | p@chr13:45289884..45289918, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45289884..45289918, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.22e-37 | 76 |
skin fibroblast | 5.50e-26 | 23 |
fibroblast of dermis | 6.55e-15 | 6 |
fibroblast of periodontium | 1.47e-14 | 6 |
preadipocyte | 5.51e-14 | 12 |
fibroblast of gingiva | 1.62e-12 | 5 |
hair follicle cell | 4.04e-08 | 5 |
multi fate stem cell | 8.94e-08 | 427 |
visceral preadipocyte | 9.08e-08 | 3 |
mesenchymal cell | 1.09e-07 | 354 |
somatic stem cell | 1.85e-07 | 433 |
connective tissue cell | 2.74e-07 | 361 |
stem cell | 4.69e-07 | 441 |
motile cell | 8.72e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.36e-30 | 41 |
surface structure | 2.31e-29 | 99 |
integument | 3.22e-28 | 46 |
integumental system | 3.22e-28 | 46 |
dermis | 2.66e-16 | 9 |
dermatome | 2.66e-16 | 9 |
future dermis | 2.66e-16 | 9 |
periodontium | 1.47e-14 | 6 |
dentition | 1.47e-14 | 6 |
skull | 2.35e-12 | 7 |
mouth | 3.29e-11 | 29 |
stomodeum | 3.29e-11 | 29 |
organ component layer | 2.46e-08 | 66 |
hair follicle | 4.04e-08 | 5 |
hair follicle placode | 4.04e-08 | 5 |
gingiva | 1.22e-07 | 8 |
cranial skeletal system | 1.49e-07 | 11 |
subdivision of head | 2.58e-07 | 49 |
connective tissue | 3.35e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.14e-08 | 5 |
myotonic disease | 5.14e-08 | 5 |
muscle tissue disease | 5.14e-08 | 5 |
myopathy | 5.14e-08 | 5 |
muscular disease | 5.14e-08 | 5 |
myotonic dystrophy | 5.14e-08 | 5 |