FFCP PHASE1:Hg19::chr13:49078833..49078841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:49078833..49078841,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr13:49078833..49078841,- | |description=CAGE_peak_at_chr13:49078833..49078841,- | ||
|id=chr13:49078833..49078841,- | |id=chr13:49078833..49078841,- | ||
|ontology_enrichment_celltype=CL:0002127!1.07e-23!1;CL:0000914!1.07e-23!1;CL:0000911!1.07e-23!1;CL:0000814!1.07e-23!1;CL:0002042!1.07e-23!1;CL:0002039!1.07e-23!1;CL:0002040!1.07e-23!1;CL:0002041!1.07e-23!1;CL:0000893!1.48e-12!2;CL:0002489!1.48e-12!2;CL:0000809!1.48e-12!2;CL:0000808!1.48e-12!2;CL:0000894!1.48e-12!2;CL:0000806!1.48e-12!2;CL:0000807!1.48e-12!2;CL:0000805!1.48e-12!2;CL:0002425!1.48e-12!2;CL:0002194!8.53e-09!63;CL:0000576!8.53e-09!63;CL:0000040!8.53e-09!63;CL:0000559!8.53e-09!63;CL:0002057!8.85e-09!42;CL:0002009!1.56e-08!65;CL:0000860!3.24e-08!45;CL:0000839!6.13e-08!70;CL:0000557!7.88e-08!71;CL:0000766!2.51e-07!76 | |ontology_enrichment_celltype=CL:0002127!1.07e-23!1;CL:0000914!1.07e-23!1;CL:0000911!1.07e-23!1;CL:0000814!1.07e-23!1;CL:0002042!1.07e-23!1;CL:0002039!1.07e-23!1;CL:0002040!1.07e-23!1;CL:0002041!1.07e-23!1;CL:0000893!1.48e-12!2;CL:0002489!1.48e-12!2;CL:0000809!1.48e-12!2;CL:0000808!1.48e-12!2;CL:0000894!1.48e-12!2;CL:0000806!1.48e-12!2;CL:0000807!1.48e-12!2;CL:0000805!1.48e-12!2;CL:0002425!1.48e-12!2;CL:0002194!8.53e-09!63;CL:0000576!8.53e-09!63;CL:0000040!8.53e-09!63;CL:0000559!8.53e-09!63;CL:0002057!8.85e-09!42;CL:0002009!1.56e-08!65;CL:0000860!3.24e-08!45;CL:0000839!6.13e-08!70;CL:0000557!7.88e-08!71;CL:0000766!2.51e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.42e-195;1!CL:0000911;5.42e-195;1!CL:0000814;5.42e-195;1!CL:0000791;1.85e-12;18!CL:0000789;1.85e-12;18!CL:0002419;1.85e-12;18!CL:0000084;2.15e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.42e-195,1;CL:0000914,5.42e-195,1;CL:0000911,5.42e-195,1;CL:0000814,5.42e-195,1;CL:0002042,5.42e-195,1;CL:0002039,5.42e-195,1;CL:0002040,5.42e-195,1;CL:0002041,5.42e-195,1;CL:0000893,1.55e-98,2;CL:0002489,1.55e-98,2;CL:0000809,1.55e-98,2;CL:0000808,1.55e-98,2;CL:0000894,1.55e-98,2;CL:0000806,1.55e-98,2;CL:0000807,1.55e-98,2;CL:0000805,1.55e-98,2;CL:0002425,1.55e-98,2;CL:0000791,1.85e-12,18;CL:0000789,1.85e-12,18;CL:0002420,1.85e-12,18;CL:0002419,1.85e-12,18;CL:0000790,1.85e-12,18;CL:0000084,2.15e-09,25;CL:0000827,2.15e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;1.55e-98;2!CL:0000790;1.85e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;2.32e-07;51!DOID:0060083;2.32e-07;51 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!6.40e-23!1;UBERON:0001961!6.40e-23!1;UBERON:0001744!6.40e-23!1;UBERON:0001735!6.40e-23!1;UBERON:0001042!8.46e-10!10;UBERON:0009145!8.46e-10!10;UBERON:0002193!1.96e-09!112;UBERON:0002405!3.47e-09!115;UBERON:0006562!5.41e-09!11;UBERON:0002390!1.01e-07!102;UBERON:0003061!1.01e-07!102;UBERON:0002371!5.72e-07!80;UBERON:0002370!6.50e-07!4;UBERON:0005058!6.50e-07!4;UBERON:0009113!6.50e-07!4;UBERON:0003295!6.50e-07!4;UBERON:0005562!6.50e-07!4 | |ontology_enrichment_uberon=UBERON:0002372!6.40e-23!1;UBERON:0001961!6.40e-23!1;UBERON:0001744!6.40e-23!1;UBERON:0001735!6.40e-23!1;UBERON:0001042!8.46e-10!10;UBERON:0009145!8.46e-10!10;UBERON:0002193!1.96e-09!112;UBERON:0002405!3.47e-09!115;UBERON:0006562!5.41e-09!11;UBERON:0002390!1.01e-07!102;UBERON:0003061!1.01e-07!102;UBERON:0002371!5.72e-07!80;UBERON:0002370!6.50e-07!4;UBERON:0005058!6.50e-07!4;UBERON:0009113!6.50e-07!4;UBERON:0003295!6.50e-07!4;UBERON:0005562!6.50e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.10e-50,4;UBERON:0005058,3.10e-50,4;UBERON:0009113,3.10e-50,4;UBERON:0003295,3.10e-50,4;UBERON:0005562,3.10e-50,4;UBERON:0003351,4.27e-34,6;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000974,3.81e-21,10;UBERON:0003408,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0001557,6.95e-12,19;UBERON:0004807,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr13:49078833..49078841,- | |short_description=p@chr13:49078833..49078841,- | ||
}} | }} |
Latest revision as of 16:32, 24 July 2015
Short description: | p@chr13:49078833..49078841, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49078833..49078841, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.42e-195 | 1 |
immature NK T cell | 5.42e-195 | 1 |
effector T cell | 5.42e-195 | 1 |
mature NK T cell | 5.42e-195 | 1 |
immature NK T cell stage IV | 5.42e-195 | 1 |
immature NK T cell stage I | 5.42e-195 | 1 |
immature NK T cell stage II | 5.42e-195 | 1 |
immature NK T cell stage III | 5.42e-195 | 1 |
thymocyte | 1.55e-98 | 2 |
double negative thymocyte | 1.55e-98 | 2 |
double-positive, alpha-beta thymocyte | 1.55e-98 | 2 |
DN4 thymocyte | 1.55e-98 | 2 |
DN1 thymic pro-T cell | 1.55e-98 | 2 |
DN2 thymocyte | 1.55e-98 | 2 |
DN3 thymocyte | 1.55e-98 | 2 |
immature single positive thymocyte | 1.55e-98 | 2 |
early T lineage precursor | 1.55e-98 | 2 |
mature alpha-beta T cell | 1.85e-12 | 18 |
alpha-beta T cell | 1.85e-12 | 18 |
immature T cell | 1.85e-12 | 18 |
mature T cell | 1.85e-12 | 18 |
immature alpha-beta T cell | 1.85e-12 | 18 |
T cell | 2.15e-09 | 25 |
pro-T cell | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.10e-50 | 4 |
hemolymphoid system gland | 3.10e-50 | 4 |
thymic region | 3.10e-50 | 4 |
pharyngeal gland | 3.10e-50 | 4 |
thymus primordium | 3.10e-50 | 4 |
pharyngeal epithelium | 4.27e-34 | 6 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
neck | 3.81e-21 | 10 |
gland of gut | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
upper respiratory tract | 6.95e-12 | 19 |
respiratory system epithelium | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
endocrine gland | 4.03e-07 | 35 |