FFCP PHASE1:Hg19::chr13:94617384..94617388,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:94617384..94617388,+ | |||
|description=CAGE_peak_at_chr13:94617384..94617388,+ | |description=CAGE_peak_at_chr13:94617384..94617388,+ | ||
|id=chr13:94617384..94617388,+ | |id=chr13:94617384..94617388,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.11e-08!9 | |ontology_enrichment_celltype=CL:0000188!1.11e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.58e-07,6;CL:0000138,7.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.96e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.18e-34;1!DOID:4549;2.18e-34;1!DOID:5861;2.18e-34;1!DOID:6496;2.18e-34;1!DOID:201;7.37e-07;6!DOID:0060100;7.37e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.58e-34,1;DOID:4549,2.58e-34,1;DOID:5861,2.58e-34,1;DOID:6496,2.58e-34,1;DOID:201,7.58e-07,6;DOID:0060100,7.58e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.97e-34;1!UBERON:0009842;5.97e-34;1!UBERON:0003704;5.97e-34;1!UBERON:0001171;5.97e-34;1!UBERON:0001172;5.97e-34;1!UBERON:0002418;1.96e-12;3!UBERON:0004755;1.96e-12;3!UBERON:0001280;2.74e-12;3!UBERON:0004647;2.74e-12;3!UBERON:0001052;1.50e-09;4!UBERON:0002394;1.50e-09;4!UBERON:0002346;1.50e-09;4!UBERON:0000923;1.50e-09;4!UBERON:0010316;1.50e-09;4!UBERON:0005291;1.50e-09;4!UBERON:0003928;1.50e-09;4!UBERON:0000966;5.54e-08;5!UBERON:0005388;5.54e-08;5!UBERON:0001802;5.54e-08;5!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5!UBERON:0004907;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.85e-34,1;UBERON:0009842,9.85e-34,1;UBERON:0003704,9.85e-34,1;UBERON:0001171,9.85e-34,1;UBERON:0001172,9.85e-34,1;UBERON:0002418,2.07e-12,3;UBERON:0004755,2.07e-12,3;UBERON:0001280,3.24e-12,3;UBERON:0004647,3.24e-12,3;UBERON:0005171,3.24e-12,3;UBERON:0001052,1.32e-09,4;UBERON:0004907,6.13e-08,5;UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,0.694499979733169,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,2.02989091390451,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0.857974989309823,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.202210631562555,0.295282444544246,0,0,0,0,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.255788742607303,0,0.314531883711793,0.109209638192014,0,0.425149840203366,1.48722917110803,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.40781839786099,0,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0.214429632529969,2.05417695252545,0,0,0,0,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.329821550236287,0.754814217833368,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.631086248772738,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0.112131862580613,0,0.404234377916439,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,0.694499979733169,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,2.02989091390451,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0.857974989309823,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.202210631562555,0.295282444544246,0,0,0,0,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.255788742607303,0,0.314531883711793,0.109209638192014,0,0.425149840203366,1.48722917110803,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.40781839786099,0,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0.214429632529969,2.05417695252545,0,0,0,0,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.329821550236287,0.754814217833368,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.631086248772738,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0.112131862580613,0,0.404234377916439,0,0.342233301085281,0,0,0,0,0.213454691755431,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:94617384..94617388,+ | |short_description=p@chr13:94617384..94617388,+ | ||
}} | }} |
Latest revision as of 17:28, 24 July 2015
Short description: | p@chr13:94617384..94617388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94617384..94617388, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.58e-07 | 6 |
chondrocyte | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.85e-34 | 1 |
acinus | 9.85e-34 | 1 |
intrahepatic bile duct | 9.85e-34 | 1 |
portal lobule | 9.85e-34 | 1 |
hepatic acinus | 9.85e-34 | 1 |
cartilage tissue | 2.07e-12 | 3 |
skeletal tissue | 2.07e-12 | 3 |
liver parenchyma | 3.24e-12 | 3 |
liver lobule | 3.24e-12 | 3 |
hepatic duct | 3.24e-12 | 3 |
rectum | 1.32e-09 | 4 |
lower digestive tract | 6.13e-08 | 5 |
retina | 7.17e-07 | 6 |
photoreceptor array | 7.17e-07 | 6 |
posterior segment of eyeball | 7.17e-07 | 6 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.58e-34 | 1 |
extraosseous chondrosarcoma | 2.58e-34 | 1 |
myxoid chondrosarcoma | 2.58e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 2.58e-34 | 1 |
connective tissue cancer | 7.58e-07 | 6 |
musculoskeletal system cancer | 7.58e-07 | 6 |