FFCP PHASE1:Hg19::chr14:106069099..106069110,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=171bp_to_ENST00000479229_5end | |association_with_transcript=171bp_to_ENST00000479229_5end | ||
|cluster_id=chr14:106069099..106069110,- | |||
|coexpression_cluster_id=C1195 | |coexpression_cluster_id=C1195 | ||
|description=CAGE_peak_2_at_ENST00000479229_5end | |description=CAGE_peak_2_at_ENST00000479229_5end | ||
|id=chr14:106069099..106069110,- | |id=chr14:106069099..106069110,- | ||
|ontology_enrichment_celltype=CL:0000244!1.80e-07!4;CL:0000731!1.80e-07!4;CL:0000083!1.86e-07!4;CL:0000076!8.14e-07!62 | |ontology_enrichment_celltype=CL:0000244!1.80e-07!4;CL:0000731!1.80e-07!4;CL:0000083!1.86e-07!4;CL:0000076!8.14e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:1000415;6.30e-21;2!CL:0002178;1.40e-14;3!CL:0000083;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.70e-21,2;CL:0002178,1.40e-14,3;CL:0000083,2.53e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.09e-21!14;DOID:305!5.15e-09!106;DOID:1799!1.15e-07!1;DOID:10165!1.15e-07!1;DOID:1798!1.15e-07!1;DOID:1793!1.86e-07!4;DOID:0050687!5.00e-07!143 | |ontology_enrichment_disease=DOID:1749!3.09e-21!14;DOID:305!5.15e-09!106;DOID:1799!1.15e-07!1;DOID:10165!1.15e-07!1;DOID:1798!1.15e-07!1;DOID:1793!1.86e-07!4;DOID:0050687!5.00e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4074;3.11e-21;2!DOID:4905;3.11e-21;2!DOID:3498;3.11e-21;2!DOID:1793;2.53e-11;4!DOID:4362;3.35e-09;5!DOID:170;5.54e-08;6!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.11e-21,2;DOID:4905,3.11e-21,2;DOID:3498,3.11e-21,2;DOID:1793,2.53e-11,4;DOID:4362,3.49e-09,5;DOID:170,5.54e-08,6;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.46e-09!169;UBERON:0000925!1.46e-09!169;UBERON:0006595!1.46e-09!169;UBERON:0002372!1.30e-07!1;UBERON:0001961!1.30e-07!1;UBERON:0001744!1.30e-07!1;UBERON:0001735!1.30e-07!1;UBERON:0003343!2.63e-07!4;UBERON:0004785!2.63e-07!4;UBERON:0001007!3.97e-07!155;UBERON:0001555!3.97e-07!155;UBERON:0007026!3.97e-07!155;UBERON:0000077!8.89e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!1.46e-09!169;UBERON:0000925!1.46e-09!169;UBERON:0006595!1.46e-09!169;UBERON:0002372!1.30e-07!1;UBERON:0001961!1.30e-07!1;UBERON:0001744!1.30e-07!1;UBERON:0001735!1.30e-07!1;UBERON:0003343!2.63e-07!4;UBERON:0004785!2.63e-07!4;UBERON:0001007!3.97e-07!155;UBERON:0001555!3.97e-07!155;UBERON:0007026!3.97e-07!155;UBERON:0000077!8.89e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.96e-14;3!UBERON:0002075;7.58e-10;18!UBERON:0000945;2.74e-09;5!UBERON:0010039;2.74e-09;5!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002075,7.42e-10,18;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43525551941941,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.56441106187842,0,0,4.19600180122473,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43525551941941,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.56441106187842,0,0,4.19600180122473,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000479229 | |short_description=p2@ENST00000479229 | ||
}} | }} |
Latest revision as of 18:37, 24 July 2015
Short description: | p2@ENST00000479229 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000479229_5end |
Coexpression cluster: | C1195_ductal_oral_gastric_Eosinophils_hepatoblastoma_CD14_epitheloid |
Association with transcript: | 171bp_to_ENST00000479229_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.70e-21 | 2 |
epithelial cell of stomach | 1.40e-14 | 3 |
epithelial cell of pancreas | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
viscus | 7.42e-10 | 18 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.11e-21 | 2 |
pancreatic carcinoma | 3.11e-21 | 2 |
pancreatic ductal adenocarcinoma | 3.11e-21 | 2 |
pancreatic cancer | 2.53e-11 | 4 |
cervical cancer | 3.49e-09 | 5 |
endocrine gland cancer | 5.54e-08 | 6 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |