FFCP PHASE1:Hg19::chr14:34638855..34638875,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:34638855..34638875,- | |||
|coexpression_cluster_id=C348 | |||
|description=CAGE_peak_at_chr14:34638855..34638875,- | |||
|id=chr14:34638855..34638875,- | |||
|ontology_enrichment_celltype=CL:0000148!2.63e-26!10;CL:0000541!2.63e-26!10;CL:0000453!4.27e-23!5;CL:0000147!1.17e-18!14;CL:0000990!6.22e-13!8;CL:0000710!6.57e-13!20;CL:0002567!9.56e-11!3;CL:0000451!1.30e-10!10;CL:0000075!2.02e-09!27;CL:0002566!5.59e-09!1;CL:0002077!1.32e-07!33;CL:0000945!2.59e-07!24;CL:0000826!2.59e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.88e-51;10!CL:0000147;2.41e-36;14!CL:0000710;2.05e-25;20!CL:0002567;9.09e-20;3!CL:0000075;8.73e-19;27!CL:0002566;5.56e-16;1!CL:0002077;5.10e-14;34!CL:0000453;3.44e-12;5!CL:0000990;3.61e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.88e-51,10;CL:0000541,6.88e-51,10;CL:0000147,2.41e-36,14;CL:0000710,2.05e-25,20;CL:0002567,1.05e-19,3;CL:0000075,8.73e-19,27;CL:0002566,5.56e-16,1;CL:0002077,7.09e-15,34;CL:0000453,3.16e-12,5;CL:0000333,1.04e-11,41;CL:0000133,3.63e-08,59;CL:0000990,3.45e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.94e-15!2;DOID:0060060!2.13e-08!1;DOID:0060061!2.13e-08!1;DOID:8691!2.13e-08!1;DOID:2355!4.07e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.15e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.31e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007029!1.37e-08!1;UBERON:0000989!1.71e-08!1;UBERON:0008811!1.71e-08!1;UBERON:0006258!1.71e-08!1;UBERON:0005876!1.71e-08!1;UBERON:0004874!1.71e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.95e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.17e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,3.03772180964799,2.36132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,24.8276766682381,3.4378958300245,1.17217447210047,0,1.95372236136315,6.60754727256618,10.2897515747008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,2.28372266835974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,0.265729680626726,2.9441770966052,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36074081324923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:34638855..34638875,- | |||
}} |
Latest revision as of 20:14, 24 July 2015
Short description: | p@chr14:34638855..34638875, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:34638855..34638875, - |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.88e-51 | 10 |
melanoblast | 6.88e-51 | 10 |
pigment cell | 2.41e-36 | 14 |
neurecto-epithelial cell | 2.05e-25 | 20 |
light melanocyte | 1.05e-19 | 3 |
columnar/cuboidal epithelial cell | 8.73e-19 | 27 |
dark melanocyte | 5.56e-16 | 1 |
ecto-epithelial cell | 7.09e-15 | 34 |
Langerhans cell | 3.16e-12 | 5 |
migratory neural crest cell | 1.04e-11 | 41 |
neurectodermal cell | 3.63e-08 | 59 |
conventional dendritic cell | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
surface | 3.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.31e-08 | 2 |