FFCP PHASE1:Hg19::chr14:77415048..77415092,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:77415048..77415092,-
|short_description=p@chr14:77415048..77415092,-
|description=CAGE_peak_at_chr14:77415048..77415092,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:77415048..77415092,- | |||
|coexpression_cluster_id=C2313 | |||
|description=CAGE_peak_at_chr14:77415048..77415092,- | |||
|id=chr14:77415048..77415092,- | |||
|ontology_enrichment_celltype=CL:0000066!4.60e-10!254;CL:0002319!3.44e-08!25;CL:0002322!1.69e-07!5;CL:0000128!2.07e-07!7;CL:0000126!2.07e-07!7;CL:0000127!2.07e-07!7;CL:0002453!2.07e-07!7;CL:0000243!5.06e-07!15;CL:0000125!5.06e-07!15;CL:0000030!5.06e-07!15;CL:0000339!5.06e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.56e-16;5!CL:0000064;5.70e-15;3!CL:0000067;5.70e-15;3!CL:0005012;5.70e-15;3!CL:0002304;5.70e-15;3!CL:0000039;3.96e-12;7!CL:0000586;3.96e-12;7!CL:0000710;2.47e-08;20!CL:0002149;3.34e-08;6!CL:0002255;3.34e-08;6!CL:0002321;3.57e-08;15!CL:0000075;5.04e-08;27!CL:0000540;7.15e-08;6!CL:0000404;7.15e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.54e-16,5;CL:0000064,6.16e-15,3;CL:0000067,6.16e-15,3;CL:0005012,6.16e-15,3;CL:0002304,6.16e-15,3;CL:0000039,4.09e-12,7;CL:0000586,4.09e-12,7;CL:0000710,2.56e-08,20;CL:0002149,3.78e-08,6;CL:0002255,3.78e-08,6;CL:0000075,5.17e-08,27;CL:0000540,5.99e-08,6;CL:0000031,5.99e-08,6;CL:0000404,5.99e-08,6;CL:0000066,1.31e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.67e-08;10!UBERON:0005564;1.67e-08;10!CL:0000031;7.15e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.99e-10!106;DOID:0050687!3.34e-10!143;DOID:162!2.35e-08!235;DOID:14566!3.82e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3001;3.34e-08;6!DOID:3095;7.48e-08;22!DOID:2994;7.48e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.78e-08,6;DOID:3095,8.28e-08,22;DOID:2994,8.28e-08,22;DOID:305,1.64e-07,106;DOID:0050687,2.15e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007625!5.08e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.70e-15;3!UBERON:0001775;5.70e-15;3!UBERON:0000488;2.33e-11;4!UBERON:0000473;1.28e-10;8!UBERON:0003135;9.84e-08;11!UBERON:0002203;9.97e-08;6!UBERON:0001768;9.97e-08;6!UBERON:0002200;9.97e-08;6!UBERON:0007625;3.99e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,6.16e-15,3;UBERON:0001775,6.16e-15,3;UBERON:0000488,2.47e-11,4;UBERON:0000473,1.31e-10,8;UBERON:0003135,1.00e-07,11;UBERON:0002203,1.03e-07,6;UBERON:0001768,1.03e-07,6;UBERON:0002200,1.03e-07,6;UBERON:0007625,4.07e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.940364164434263,0.286235987131057,1.36874425072884,0.87879847716362,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.03988298880475,1.77383517970051,1.40535657109002,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,2.6834215348511,0.795178609928912,2.09149097165133,2.59152637538426,3.02785021050754,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.695582429850461,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.36408156524854,1.78309414843965,0,0,0,0,0,0.140669416410513,0.111308705022906,0,46.2364643800306,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.227586896570999,16.5264872690298,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,9.78323094660449,0.242780379534093,0,0,0,0,0,0,0,0,0.941798755221676,0,0,0.416024019039416,10.9342635151132,0,0,0,0.171986032471617,0.0967563312890851,0.438535902517113,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0,0,0.235694034616795,0.951329442515298,0.732219924186332,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,1.01607998478941,0,0,1.44677833618517,2.20063098555574,1.66176135211674,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0.211200673038813,1.25501137532991,0,0,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0.680117776536817,0,0,0.179088841081487,1.54400723580486,0.438568099157414,0,0,0.506827321959218,0,4.49059444250558,0,0,0,0,0,0,1.72041036127604,0,0.19998739585493,0,0,0,0,0,0,0,0.431299245586727,0.786329709279482,0,0,0,1.23935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,1.07140367175657,0.672567444437648,0,0.227662191351298,0,0,0.685952037749674,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0,0,1.94334832096759,0,0.0714765441766563,0.158013611732727,44.7529487667282,1.21700790611806,0,0,0,0,0,0,0.0852134047591577,0,0,1.24082554265728,5.7332336338646,0,0,0,0,0,0,0,0,0.397901550322736,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0.327796715891087,9.2489905738349,8.66905052806845,7.48208734743569,5.329904173021,4.011320628678,0,0.267964130156178,0,0,0,0,0.129177819672012,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.940364164434263,0.286235987131057,1.36874425072884,0.87879847716362,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.03988298880475,1.77383517970051,1.40535657109002,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,2.6834215348511,0.795178609928912,2.09149097165133,2.59152637538426,3.02785021050754,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0.695582429850461,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.36408156524854,1.78309414843965,0,0,0,0,0,0.140669416410513,0.111308705022906,0,46.2364643800306,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.227586896570999,16.5264872690298,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,9.78323094660449,0.242780379534093,0,0,0,0,0,0,0,0,0.941798755221676,0,0,0.416024019039416,10.9342635151132,0,0,0,0.171986032471617,0.0967563312890851,0.438535902517113,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0,0,0.235694034616795,0.951329442515298,0.732219924186332,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,1.01607998478941,0,0,1.44677833618517,2.20063098555574,1.66176135211674,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0.211200673038813,1.25501137532991,0,0,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0,0,0.680117776536817,0,0,0.179088841081487,1.54400723580486,0.438568099157414,0,0,0.506827321959218,0,4.49059444250558,0,0,0,0,0,0,1.72041036127604,0,0.19998739585493,0,0,0,0,0,0,0,0.431299245586727,0.786329709279482,0,0,0,1.23935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0.163771917510097,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,1.07140367175657,0.672567444437648,0,0.227662191351298,0,0,0.685952037749674,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0,0,1.94334832096759,0,0.0714765441766563,0.158013611732727,44.7529487667282,1.21700790611806,0,0,0,0,0,0,0.0852134047591577,0,0,1.24082554265728,5.7332336338646,0,0,0,0,0,0,0,0,0.397901550322736,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0.327796715891087,9.2489905738349,8.66905052806845,7.48208734743569,5.329904173021,4.011320628678,0,0.267964130156178,0,0,0,0,0.129177819672012,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr14:77415048..77415092,- | |||
}} | }} |
Latest revision as of 23:00, 24 July 2015
Short description: | p@chr14:77415048..77415092, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:77415048..77415092, - |
Coexpression cluster: | C2313_anaplastic_rhabdomyosarcoma_bronchioalveolar_endometrioid_ductal_teratocarcinoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.54e-16 | 5 |
ciliated cell | 6.16e-15 | 3 |
ciliated epithelial cell | 6.16e-15 | 3 |
multi-ciliated epithelial cell | 6.16e-15 | 3 |
non-pigmented ciliary epithelial cell | 6.16e-15 | 3 |
germ line cell | 4.09e-12 | 7 |
germ cell | 4.09e-12 | 7 |
neurecto-epithelial cell | 2.56e-08 | 20 |
epithelial cell of uterus | 3.78e-08 | 6 |
stromal cell of endometrium | 3.78e-08 | 6 |
columnar/cuboidal epithelial cell | 5.17e-08 | 27 |
neuron | 5.99e-08 | 6 |
neuroblast | 5.99e-08 | 6 |
electrically signaling cell | 5.99e-08 | 6 |
epithelial cell | 1.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 6.16e-15 | 3 |
ciliary body | 6.16e-15 | 3 |
atypical epithelium | 2.47e-11 | 4 |
testis | 1.31e-10 | 8 |
male reproductive organ | 1.00e-07 | 11 |
vasculature of eye | 1.03e-07 | 6 |
uvea | 1.03e-07 | 6 |
vasculature of head | 1.03e-07 | 6 |
pigment epithelium of eye | 4.07e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.78e-08 | 6 |
germ cell and embryonal cancer | 8.28e-08 | 22 |
germ cell cancer | 8.28e-08 | 22 |
carcinoma | 1.64e-07 | 106 |
cell type cancer | 2.15e-07 | 143 |