FFCP PHASE1:Hg19::chr15:25231001..25231006,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:25231001..25231006,+ | |||
|coexpression_cluster_id=C452 | |coexpression_cluster_id=C452 | ||
|description=CAGE_peak_at_chr15:25231001..25231006,+ | |description=CAGE_peak_at_chr15:25231001..25231006,+ | ||
|id=chr15:25231001..25231006,+ | |id=chr15:25231001..25231006,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.18e-11;2 | |||
|ontology_enrichment_disease=DOID:114!7.39e-08!2 | |ontology_enrichment_disease=DOID:114!7.39e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.76e-38!57;UBERON:0005068!2.76e-38!57;UBERON:0006241!2.76e-38!57;UBERON:0007135!2.76e-38!57;UBERON:0001017!6.77e-33!82;UBERON:0005743!4.95e-31!86;UBERON:0002616!5.03e-31!59;UBERON:0002020!3.66e-29!34;UBERON:0003528!3.66e-29!34;UBERON:0007023!6.11e-29!115;UBERON:0000073!2.10e-27!94;UBERON:0001016!2.10e-27!94;UBERON:0003075!3.66e-27!86;UBERON:0007284!3.66e-27!86;UBERON:0002780!1.32e-26!41;UBERON:0001890!1.32e-26!41;UBERON:0006240!1.32e-26!41;UBERON:0003080!7.20e-26!42;UBERON:0002346!1.24e-25!90;UBERON:0000955!3.46e-25!69;UBERON:0006238!3.46e-25!69;UBERON:0001869!1.99e-24!32;UBERON:0002791!1.38e-23!33;UBERON:0001893!8.52e-23!34;UBERON:0002619!1.69e-20!22;UBERON:0000956!8.35e-18!25;UBERON:0000203!8.35e-18!25;UBERON:0003056!2.02e-16!61;UBERON:0001950!1.75e-15!20;UBERON:0002308!1.20e-13!9;UBERON:0000125!1.20e-13!9;UBERON:0003076!1.51e-13!15;UBERON:0003057!1.51e-13!15;UBERON:0004121!4.31e-13!169;UBERON:0000033!9.51e-13!123;UBERON:0000924!1.29e-12!173;UBERON:0006601!1.29e-12!173;UBERON:0000153!7.18e-12!129;UBERON:0007811!7.18e-12!129;UBERON:0002771!9.39e-12!3;UBERON:0005383!1.25e-11!3;UBERON:0005382!1.25e-11!3;UBERON:0000025!1.73e-11!194;UBERON:0000988!6.68e-11!3;UBERON:0002298!9.49e-11!8;UBERON:0002420!7.99e-10!9;UBERON:0007245!7.99e-10!9;UBERON:0010009!7.99e-10!9;UBERON:0010011!7.99e-10!9;UBERON:0000454!7.99e-10!9;UBERON:0004733!9.51e-10!12;UBERON:0002028!9.51e-10!12;UBERON:0007277!9.51e-10!12;UBERON:0004732!6.02e-09!13;UBERON:0000369!8.06e-09!4;UBERON:0002435!8.06e-09!4;UBERON:0000204!8.06e-09!4;UBERON:0010082!8.06e-09!4;UBERON:0001954!9.94e-09!2;UBERON:0003022!9.94e-09!2;UBERON:0002421!9.94e-09!2;UBERON:0002600!9.94e-09!2;UBERON:0004111!1.67e-08!241;UBERON:0001873!1.72e-08!2;UBERON:0010122!1.72e-08!2;UBERON:0009663!2.68e-08!7;UBERON:0002148!5.03e-08!2;UBERON:0009662!5.03e-08!2;UBERON:0001871!1.33e-07!7;UBERON:0000349!1.83e-07!5;UBERON:0000477!3.44e-07!286;UBERON:0001872!4.06e-07!5;UBERON:0002021!4.60e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.76e-38!57;UBERON:0005068!2.76e-38!57;UBERON:0006241!2.76e-38!57;UBERON:0007135!2.76e-38!57;UBERON:0001017!6.77e-33!82;UBERON:0005743!4.95e-31!86;UBERON:0002616!5.03e-31!59;UBERON:0002020!3.66e-29!34;UBERON:0003528!3.66e-29!34;UBERON:0007023!6.11e-29!115;UBERON:0000073!2.10e-27!94;UBERON:0001016!2.10e-27!94;UBERON:0003075!3.66e-27!86;UBERON:0007284!3.66e-27!86;UBERON:0002780!1.32e-26!41;UBERON:0001890!1.32e-26!41;UBERON:0006240!1.32e-26!41;UBERON:0003080!7.20e-26!42;UBERON:0002346!1.24e-25!90;UBERON:0000955!3.46e-25!69;UBERON:0006238!3.46e-25!69;UBERON:0001869!1.99e-24!32;UBERON:0002791!1.38e-23!33;UBERON:0001893!8.52e-23!34;UBERON:0002619!1.69e-20!22;UBERON:0000956!8.35e-18!25;UBERON:0000203!8.35e-18!25;UBERON:0003056!2.02e-16!61;UBERON:0001950!1.75e-15!20;UBERON:0002308!1.20e-13!9;UBERON:0000125!1.20e-13!9;UBERON:0003076!1.51e-13!15;UBERON:0003057!1.51e-13!15;UBERON:0004121!4.31e-13!169;UBERON:0000033!9.51e-13!123;UBERON:0000924!1.29e-12!173;UBERON:0006601!1.29e-12!173;UBERON:0000153!7.18e-12!129;UBERON:0007811!7.18e-12!129;UBERON:0002771!9.39e-12!3;UBERON:0005383!1.25e-11!3;UBERON:0005382!1.25e-11!3;UBERON:0000025!1.73e-11!194;UBERON:0000988!6.68e-11!3;UBERON:0002298!9.49e-11!8;UBERON:0002420!7.99e-10!9;UBERON:0007245!7.99e-10!9;UBERON:0010009!7.99e-10!9;UBERON:0010011!7.99e-10!9;UBERON:0000454!7.99e-10!9;UBERON:0004733!9.51e-10!12;UBERON:0002028!9.51e-10!12;UBERON:0007277!9.51e-10!12;UBERON:0004732!6.02e-09!13;UBERON:0000369!8.06e-09!4;UBERON:0002435!8.06e-09!4;UBERON:0000204!8.06e-09!4;UBERON:0010082!8.06e-09!4;UBERON:0001954!9.94e-09!2;UBERON:0003022!9.94e-09!2;UBERON:0002421!9.94e-09!2;UBERON:0002600!9.94e-09!2;UBERON:0004111!1.67e-08!241;UBERON:0001873!1.72e-08!2;UBERON:0010122!1.72e-08!2;UBERON:0009663!2.68e-08!7;UBERON:0002148!5.03e-08!2;UBERON:0009662!5.03e-08!2;UBERON:0001871!1.33e-07!7;UBERON:0000349!1.83e-07!5;UBERON:0000477!3.44e-07!286;UBERON:0001872!4.06e-07!5;UBERON:0002021!4.60e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001954;3.00e-40;2!UBERON:0003022;3.00e-40;2!UBERON:0002421;3.00e-40;2!UBERON:0002600;3.00e-40;2!UBERON:0000349;4.94e-36;5!UBERON:0003528;4.60e-24;34!UBERON:0002020;4.60e-24;34!UBERON:0002619;1.15e-21;22!UBERON:0000956;3.41e-19;25!UBERON:0000203;3.41e-19;25!UBERON:0002780;9.33e-19;41!UBERON:0001890;9.33e-19;41!UBERON:0002791;2.64e-18;32!UBERON:0001869;2.64e-18;32!UBERON:0001893;2.42e-16;34!UBERON:0000073;1.18e-12;53!UBERON:0002616;1.18e-12;53!UBERON:0001871;2.12e-12;6!UBERON:0002771;1.92e-11;2!UBERON:0001905;1.92e-11;2!UBERON:0002757;1.92e-11;2!UBERON:0010134;1.92e-11;2!UBERON:0005408;1.92e-11;2!UBERON:0001899;1.92e-11;2!UBERON:0001876;3.18e-11;2!UBERON:0001873;3.18e-11;2!UBERON:0002148;3.18e-11;2!UBERON:0006331;3.18e-11;2!UBERON:0009662;3.18e-11;2!UBERON:0002420;9.23e-10;9!UBERON:0000125;9.23e-10;9!UBERON:0007245;9.23e-10;9!UBERON:0002308;9.23e-10;9!UBERON:0010009;9.23e-10;9!UBERON:0010011;9.23e-10;9!UBERON:0000454;9.23e-10;9!UBERON:0001950;3.49e-09;20!UBERON:0000988;6.56e-08;3!UBERON:0005383;6.56e-08;3!UBERON:0005382;6.56e-08;3!UBERON:0000955;2.18e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.01e-40,2;UBERON:0003022,2.01e-40,2;UBERON:0002421,2.01e-40,2;UBERON:0002600,2.01e-40,2;UBERON:0000349,4.66e-36,5;UBERON:0003528,1.52e-27,34;UBERON:0002020,1.52e-27,34;UBERON:0000073,3.12e-23,53;UBERON:0002616,3.12e-23,53;UBERON:0002780,5.14e-23,41;UBERON:0001890,5.14e-23,41;UBERON:0003080,5.14e-23,41;UBERON:0006240,5.14e-23,41;UBERON:0001049,5.35e-22,56;UBERON:0005068,5.35e-22,56;UBERON:0006241,5.35e-22,56;UBERON:0007135,5.35e-22,56;UBERON:0002619,9.49e-22,22;UBERON:0002791,1.23e-21,32;UBERON:0001869,1.23e-21,32;UBERON:0001893,2.10e-20,34;UBERON:0000956,2.87e-19,25;UBERON:0000203,2.87e-19,25;UBERON:0000955,7.23e-18,68;UBERON:0006238,7.23e-18,68;UBERON:0003056,1.51e-15,61;UBERON:0001017,5.05e-15,81;UBERON:0003075,5.05e-15,82;UBERON:0007284,5.05e-15,82;UBERON:0002346,2.56e-14,86;UBERON:0001016,1.60e-13,89;UBERON:0001871,2.24e-12,6;UBERON:0010371,8.37e-12,104;UBERON:0002771,1.82e-11,2;UBERON:0001905,2.02e-11,2;UBERON:0002757,2.02e-11,2;UBERON:0010134,2.02e-11,2;UBERON:0005408,2.02e-11,2;UBERON:0001899,2.02e-11,2;UBERON:0001873,2.47e-11,2;UBERON:0010122,2.47e-11,2;UBERON:0002148,3.35e-11,2;UBERON:0006331,3.35e-11,2;UBERON:0009662,3.35e-11,2;UBERON:0001876,3.70e-11,2;UBERON:0007023,7.67e-11,114;UBERON:0000125,8.46e-10,9;UBERON:0002308,8.46e-10,9;UBERON:0002420,8.84e-10,9;UBERON:0007245,8.84e-10,9;UBERON:0010009,8.84e-10,9;UBERON:0010011,8.84e-10,9;UBERON:0000454,8.84e-10,9;UBERON:0010314,3.11e-09,132;UBERON:0001950,3.26e-09,20;UBERON:0005383,5.54e-08,3;UBERON:0005382,5.54e-08,3;UBERON:0000988,6.78e-08,3;UBERON:0004121,6.04e-07,171;UBERON:0000924,6.04e-07,171;UBERON:0006601,6.04e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91560630868582,0.205116364240755,0.504143392443436,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0.413373593002368,0,0.546974809018219,0,0,0,0,2.14280734351315,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.530119073285941,0,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91560630868582,0.205116364240755,0.504143392443436,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0.781078098613847,0.413373593002368,0,0.546974809018219,0,0,0,0,2.14280734351315,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr15:25231001..25231006,+ | |short_description=p@chr15:25231001..25231006,+ | ||
}} | }} |
Latest revision as of 00:27, 25 July 2015
Short description: | p@chr15:25231001..25231006, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:25231001..25231006, + |
Coexpression cluster: | C452_hippocampus_locus_middle_pineal_occipital_thalamus_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data