FFCP PHASE1:Hg19::chr15:33011385..33011401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_ENST00000558441,uc001zhc.1_5end | |association_with_transcript=-177bp_to_ENST00000558441,uc001zhc.1_5end | ||
|cluster_id=chr15:33011385..33011401,- | |||
|description=CAGE_peak_1_at_ENST00000558441_5end,CAGE_peak_1_at_uc001zhc.1_5end | |description=CAGE_peak_1_at_ENST00000558441_5end,CAGE_peak_1_at_uc001zhc.1_5end | ||
|id=chr15:33011385..33011401,- | |id=chr15:33011385..33011401,- | ||
|ontology_enrichment_celltype=CL:0000055!9.88e-34!180;CL:0000057!1.41e-26!75;CL:0000192!4.04e-20!42;CL:0000514!4.04e-20!42;CL:0000680!2.93e-17!57;CL:0000056!2.93e-17!57;CL:0000355!2.93e-17!57;CL:0000359!9.08e-17!32;CL:0000048!2.47e-16!430;CL:0002620!6.48e-16!23;CL:0002334!1.14e-15!12;CL:0000723!1.18e-15!436;CL:0000034!8.87e-15!444;CL:0000187!1.15e-14!54;CL:0000183!1.22e-12!59;CL:0000393!2.81e-12!60;CL:0000211!2.81e-12!60;CL:0002539!3.55e-12!10;CL:0002371!1.74e-09!591;CL:0000144!2.33e-09!625;CL:0000548!5.55e-07!679;CL:0000004!5.55e-07!679;CL:0000255!5.55e-07!679;CL:0002559!7.31e-07!4;CL:0000012!8.63e-07!682 | |ontology_enrichment_celltype=CL:0000055!9.88e-34!180;CL:0000057!1.41e-26!75;CL:0000192!4.04e-20!42;CL:0000514!4.04e-20!42;CL:0000680!2.93e-17!57;CL:0000056!2.93e-17!57;CL:0000355!2.93e-17!57;CL:0000359!9.08e-17!32;CL:0000048!2.47e-16!430;CL:0002620!6.48e-16!23;CL:0002334!1.14e-15!12;CL:0000723!1.18e-15!436;CL:0000034!8.87e-15!444;CL:0000187!1.15e-14!54;CL:0000183!1.22e-12!59;CL:0000393!2.81e-12!60;CL:0000211!2.81e-12!60;CL:0002539!3.55e-12!10;CL:0002371!1.74e-09!591;CL:0000144!2.33e-09!625;CL:0000548!5.55e-07!679;CL:0000004!5.55e-07!679;CL:0000255!5.55e-07!679;CL:0002559!7.31e-07!4;CL:0000012!8.63e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.70e-22;10!CL:0000359;4.03e-21;32!CL:0002334;2.54e-17;12!CL:0002559;4.34e-14;5!CL:0000192;3.82e-13;43!CL:0002620;3.38e-11;23!CL:0000346;1.16e-09;3!CL:1000428;1.16e-09;3!CL:0002579;1.86e-09;3!CL:0002580;3.16e-09;3!CL:0000057;8.79e-09;73!CL:0002594;2.49e-07;4!CL:0000187;2.99e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.91e-22,10;CL:0000359,8.85e-22,32;CL:0000057,1.51e-21,76;CL:0002334,3.41e-17,12;CL:0000192,6.98e-17,43;CL:0000514,6.98e-17,43;CL:0000680,2.00e-14,58;CL:0000056,2.00e-14,58;CL:0000355,2.00e-14,58;CL:0000048,2.09e-14,427;CL:0002559,3.27e-14,5;CL:0000723,5.46e-14,433;CL:0000034,1.89e-13,441;CL:0000187,3.68e-12,55;CL:0002620,3.08e-11,23;CL:0000393,1.63e-10,61;CL:0000211,1.63e-10,61;CL:0000346,1.18e-09,3;CL:1000428,1.18e-09,3;CL:0002579,2.14e-09,3;CL:0002580,2.53e-09,3;CL:0002594,2.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.82e-13;43!CL:0000355;1.06e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.47e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.04e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.80e-22!83;UBERON:0002329!9.80e-22!83;UBERON:0003077!9.80e-22!83;UBERON:0003059!9.80e-22!83;UBERON:0007282!9.80e-22!83;UBERON:0009618!9.80e-22!83;UBERON:0007285!9.80e-22!83;UBERON:0004290!1.78e-21!70;UBERON:0001637!1.50e-16!42;UBERON:0003509!1.50e-16!42;UBERON:0004572!1.50e-16!42;UBERON:0000486!2.07e-16!82;UBERON:0002199!6.28e-16!45;UBERON:0002416!6.28e-16!45;UBERON:0004573!8.78e-16!33;UBERON:0004571!8.78e-16!33;UBERON:0001134!1.95e-15!61;UBERON:0002036!1.95e-15!61;UBERON:0003082!1.95e-15!61;UBERON:0002385!1.28e-14!63;UBERON:0001015!1.28e-14!63;UBERON:0000383!1.28e-14!63;UBERON:0002097!1.68e-14!40;UBERON:0005256!4.18e-13!143;UBERON:0000947!1.51e-12!21;UBERON:0010191!1.51e-12!21;UBERON:0004237!3.55e-12!10;UBERON:0004695!3.55e-12!10;UBERON:0002111!3.55e-12!10;UBERON:0004178!3.55e-12!10;UBERON:0003102!4.98e-12!95;UBERON:0001135!6.40e-12!15;UBERON:0002100!2.35e-10!216;UBERON:0001981!3.35e-10!60;UBERON:0007500!3.35e-10!60;UBERON:0004537!3.35e-10!60;UBERON:0006965!3.35e-10!60;UBERON:0004872!5.08e-10!84;UBERON:0000475!2.23e-09!365;UBERON:0002067!1.31e-08!9;UBERON:0004016!1.31e-08!9;UBERON:0010083!1.31e-08!9;UBERON:0003688!1.51e-08!6;UBERON:0002358!1.51e-08!6;UBERON:0003684!1.51e-08!6;UBERON:0001178!1.51e-08!6;UBERON:0000055!7.39e-08!69;UBERON:0002049!1.17e-07!79;UBERON:0007798!1.17e-07!79;UBERON:0002384!3.88e-07!375;UBERON:0002073!7.31e-07!4;UBERON:0005086!7.31e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.70e-22;10!UBERON:0004695;1.70e-22;10!UBERON:0002111;1.70e-22;10!UBERON:0004178;1.70e-22;10!UBERON:0001135;2.44e-14;15!UBERON:0002073;4.34e-14;5!UBERON:0004573;4.70e-14;33!UBERON:0004571;4.70e-14;33!UBERON:0002097;8.67e-13;41!UBERON:0000947;4.01e-12;21!UBERON:0010191;4.01e-12;21!UBERON:0002199;2.01e-10;46!UBERON:0002416;2.01e-10;46!UBERON:0001637;2.09e-10;42!UBERON:0003509;2.09e-10;42!UBERON:0004572;2.09e-10;42!UBERON:0003102;3.01e-10;50!UBERON:0000412;1.16e-09;3!UBERON:0001992;1.16e-09;3!UBERON:0002385;6.08e-09;31!UBERON:0001015;6.08e-09;31!UBERON:0000383;6.08e-09;31!UBERON:0003688;7.38e-08;6!UBERON:0002358;7.38e-08;6!UBERON:0003684;7.38e-08;6!UBERON:0001178;7.38e-08;6!UBERON:0002067;1.68e-07;9!UBERON:0001310;2.49e-07;4!UBERON:0007500;3.60e-07;56!UBERON:0001981;3.60e-07;56!UBERON:0004537;3.60e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.91e-22,10;UBERON:0004695,1.91e-22,10;UBERON:0002111,1.91e-22,10;UBERON:0004178,1.91e-22,10;UBERON:0002329,3.10e-18,71;UBERON:0003059,3.10e-18,71;UBERON:0007282,3.10e-18,71;UBERON:0004290,3.10e-18,71;UBERON:0009618,3.10e-18,71;UBERON:0003077,6.93e-18,72;UBERON:0007285,6.93e-18,72;UBERON:0001637,1.09e-17,42;UBERON:0003509,1.09e-17,42;UBERON:0004572,1.09e-17,42;UBERON:0007524,1.51e-17,73;UBERON:0002097,2.45e-16,41;UBERON:0004573,5.47e-16,33;UBERON:0004571,5.47e-16,33;UBERON:0007503,5.52e-16,78;UBERON:0002199,6.52e-16,46;UBERON:0002416,6.52e-16,46;UBERON:0000486,1.29e-14,83;UBERON:0001135,2.63e-14,15;UBERON:0002073,3.27e-14,5;UBERON:0005086,3.27e-14,5;UBERON:0001134,3.75e-13,62;UBERON:0002036,3.75e-13,62;UBERON:0003082,3.75e-13,62;UBERON:0002385,1.41e-12,64;UBERON:0001015,1.41e-12,64;UBERON:0000383,1.41e-12,64;UBERON:0000947,4.28e-12,21;UBERON:0010191,4.28e-12,21;UBERON:0007500,3.25e-11,59;UBERON:0001981,3.25e-11,59;UBERON:0004537,3.25e-11,59;UBERON:0006965,3.25e-11,59;UBERON:0004872,8.75e-11,83;UBERON:0005256,9.07e-10,122;UBERON:0000412,1.18e-09,3;UBERON:0001992,1.18e-09,3;UBERON:0000055,3.94e-09,68;UBERON:0003102,4.29e-09,99;UBERON:0002100,6.23e-09,199;UBERON:0003688,9.65e-08,6;UBERON:0002358,9.65e-08,6;UBERON:0003684,9.65e-08,6;UBERON:0001178,9.65e-08,6;UBERON:0002067,1.52e-07,9;UBERON:0004016,1.52e-07,9;UBERON:0010083,1.52e-07,9;UBERON:0002049,2.10e-07,78;UBERON:0007798,2.10e-07,78;UBERON:0001310,2.69e-07,4;UBERON:0000490,6.48e-07,148;UBERON:0000310,9.84e-07,10 | |||
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|short_description=p1@ENST00000558441,p1@uc001zhc.1 | |short_description=p1@ENST00000558441,p1@uc001zhc.1 | ||
}} | }} |
Latest revision as of 00:47, 25 July 2015
Short description: | p1@ENST00000558441, p1@uc001zhc.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558441_5end, CAGE_peak_1_at_uc001zhc.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -177bp_to_ENST00000558441, uc001zhc.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.91e-22 | 10 |
vascular associated smooth muscle cell | 8.85e-22 | 32 |
fibroblast | 1.51e-21 | 76 |
preadipocyte | 3.41e-17 | 12 |
smooth muscle cell | 6.98e-17 | 43 |
smooth muscle myoblast | 6.98e-17 | 43 |
muscle precursor cell | 2.00e-14 | 58 |
myoblast | 2.00e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.00e-14 | 58 |
multi fate stem cell | 2.09e-14 | 427 |
hair follicle cell | 3.27e-14 | 5 |
somatic stem cell | 5.46e-14 | 433 |
stem cell | 1.89e-13 | 441 |
muscle cell | 3.68e-12 | 55 |
skin fibroblast | 3.08e-11 | 23 |
electrically responsive cell | 1.63e-10 | 61 |
electrically active cell | 1.63e-10 | 61 |
hair follicle dermal papilla cell | 1.18e-09 | 3 |
stem cell of epidermis | 1.18e-09 | 3 |
omentum preadipocyte | 2.14e-09 | 3 |
preadipocyte of the breast | 2.53e-09 | 3 |
smooth muscle cell of the umbilical artery | 2.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.04e-08 | 14 |