FFCP PHASE1:Hg19::chr16:29302794..29302807,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29302794..29302807,+ | |||
|coexpression_cluster_id=C1380 | |coexpression_cluster_id=C1380 | ||
|description=CAGE_peak_at_chr16:29302794..29302807,+ | |description=CAGE_peak_at_chr16:29302794..29302807,+ | ||
|id=chr16:29302794..29302807,+ | |id=chr16:29302794..29302807,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.62e-54!42;CL:0000860!3.92e-50!45;CL:0000766!3.57e-46!76;CL:0000557!2.90e-45!71;CL:0000839!6.67e-42!70;CL:0002009!1.01e-36!65;CL:0002194!3.77e-34!63;CL:0000576!3.77e-34!63;CL:0000040!3.77e-34!63;CL:0000559!3.77e-34!63;CL:0000763!7.98e-33!112;CL:0000049!7.98e-33!112;CL:0000738!1.12e-27!140;CL:0002031!3.13e-24!124;CL:0000037!1.09e-21!172;CL:0000566!1.09e-21!172;CL:0002032!7.12e-21!165;CL:0000837!7.12e-21!165;CL:0000988!3.04e-20!182;CL:0002087!2.11e-18!119;CL:0002274!2.46e-13!5;CL:0000457!2.46e-13!5;CL:0002191!2.46e-13!5;CL:0000097!2.46e-13!5;CL:0000831!2.46e-13!5;CL:0002028!2.46e-13!5;CL:0000767!4.79e-10!3;CL:0000134!7.83e-09!358;CL:0002320!1.44e-08!365;CL:0000219!1.25e-07!390;CL:0000163!1.31e-07!9;CL:0000048!2.64e-07!430;CL:0000723!3.93e-07!436;CL:0000034!6.56e-07!444 | |ontology_enrichment_celltype=CL:0002057!5.62e-54!42;CL:0000860!3.92e-50!45;CL:0000766!3.57e-46!76;CL:0000557!2.90e-45!71;CL:0000839!6.67e-42!70;CL:0002009!1.01e-36!65;CL:0002194!3.77e-34!63;CL:0000576!3.77e-34!63;CL:0000040!3.77e-34!63;CL:0000559!3.77e-34!63;CL:0000763!7.98e-33!112;CL:0000049!7.98e-33!112;CL:0000738!1.12e-27!140;CL:0002031!3.13e-24!124;CL:0000037!1.09e-21!172;CL:0000566!1.09e-21!172;CL:0002032!7.12e-21!165;CL:0000837!7.12e-21!165;CL:0000988!3.04e-20!182;CL:0002087!2.11e-18!119;CL:0002274!2.46e-13!5;CL:0000457!2.46e-13!5;CL:0002191!2.46e-13!5;CL:0000097!2.46e-13!5;CL:0000831!2.46e-13!5;CL:0002028!2.46e-13!5;CL:0000767!4.79e-10!3;CL:0000134!7.83e-09!358;CL:0002320!1.44e-08!365;CL:0000219!1.25e-07!390;CL:0000163!1.31e-07!9;CL:0000048!2.64e-07!430;CL:0000723!3.93e-07!436;CL:0000034!6.56e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.98e-51;5!CL:0000163;6.50e-29;9!CL:0000860;3.23e-13;33!CL:0002057;3.23e-13;33!CL:0000766;1.09e-09;69!CL:0000473;4.77e-09;39!CL:0000234;4.77e-09;39!CL:0000151;7.35e-08;36!CL:0000763;4.72e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-51,5;CL:0002028,2.30e-51,5;CL:0000163,5.64e-29,9;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002031,1.14e-11,120;CL:0000860,2.90e-11,42;CL:0002057,2.90e-11,42;CL:0000738,2.51e-10,136;CL:0000473,6.46e-10,48;CL:0000234,6.46e-10,48;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0002194,5.07e-08,59;CL:0000576,5.07e-08,59;CL:0000040,5.07e-08,59;CL:0000559,5.07e-08,59;CL:0000988,5.65e-08,177;CL:0000151,8.34e-08,36;CL:0002009,8.93e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-08;42 | |||
|ontology_enrichment_disease=DOID:5662!1.14e-07!1 | |ontology_enrichment_disease=DOID:5662!1.14e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.31e-40!80;UBERON:0001474!1.02e-36!86;UBERON:0002390!3.33e-33!102;UBERON:0003061!3.33e-33!102;UBERON:0004765!1.11e-30!101;UBERON:0001434!1.11e-30!101;UBERON:0002193!7.17e-30!112;UBERON:0002405!5.47e-29!115;UBERON:0002204!6.74e-17!167;UBERON:0003081!2.24e-13!216;UBERON:0002384!3.33e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!9.31e-40!80;UBERON:0001474!1.02e-36!86;UBERON:0002390!3.33e-33!102;UBERON:0003061!3.33e-33!102;UBERON:0004765!1.11e-30!101;UBERON:0001434!1.11e-30!101;UBERON:0002193!7.17e-30!112;UBERON:0002405!5.47e-29!115;UBERON:0002204!6.74e-17!167;UBERON:0003081!2.24e-13!216;UBERON:0002384!3.33e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.822335776043652,0,0,0.256160706529101,0.945928919554341,0.344745680736619,0.645484683583826,4.06279459783025,0.188242339542605,0.272906150057846,0.674170453335254,0,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,2.26954089876456,1.24564449799115,0.251248665256743,0,0.217188844705117,0,2.57794345191295,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69526550203004,1.58531948758658,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0.822335776043652,0,0,0.256160706529101,0.945928919554341,0.344745680736619,0.645484683583826,4.06279459783025,0.188242339542605,0.272906150057846,0.674170453335254,0,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0,2.26954089876456,1.24564449799115,0.251248665256743,0,0.217188844705117,0,2.57794345191295,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69526550203004,1.58531948758658,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:29302794..29302807,+ | |short_description=p@chr16:29302794..29302807,+ | ||
}} | }} |
Latest revision as of 07:50, 25 July 2015
Short description: | p@chr16:29302794..29302807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29302794..29302807, + |
Coexpression cluster: | C1380_Mast_CD14_Basophils_embryonic_pineal_CD133_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-51 | 5 |
basophil mast progenitor cell | 2.30e-51 | 5 |
endocrine cell | 5.64e-29 | 9 |
myeloid lineage restricted progenitor cell | 7.23e-21 | 66 |
granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
myeloid leukocyte | 3.53e-19 | 72 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
classical monocyte | 2.90e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-11 | 42 |
leukocyte | 2.51e-10 | 136 |
defensive cell | 6.46e-10 | 48 |
phagocyte | 6.46e-10 | 48 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
monopoietic cell | 5.07e-08 | 59 |
monocyte | 5.07e-08 | 59 |
monoblast | 5.07e-08 | 59 |
promonocyte | 5.07e-08 | 59 |
hematopoietic cell | 5.65e-08 | 177 |
secretory cell | 8.34e-08 | 36 |
macrophage dendritic cell progenitor | 8.93e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |