FFCP PHASE1:Hg19::chr16:30440530..30440614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30440530..30440614,- | |||
|description=CAGE_peak_at_chr16:30440530..30440614,- | |description=CAGE_peak_at_chr16:30440530..30440614,- | ||
|id=chr16:30440530..30440614,- | |id=chr16:30440530..30440614,- | ||
|ontology_enrichment_celltype=CL:0000222!8.93e-32!119;CL:0000220!7.64e-22!246;CL:0002321!9.25e-22!248;CL:0000144!1.47e-21!625;CL:0002371!4.02e-20!591;CL:0000213!2.53e-18!57;CL:0000215!2.53e-18!57;CL:0000548!3.57e-18!679;CL:0000004!3.57e-18!679;CL:0000255!3.57e-18!679;CL:0000055!5.63e-18!180;CL:0000115!8.92e-18!35;CL:0002078!1.74e-17!44;CL:0000012!3.01e-17!682;CL:0002139!9.76e-16!24;CL:0000183!4.76e-14!59;CL:0000680!9.33e-14!57;CL:0000056!9.33e-14!57;CL:0000355!9.33e-14!57;CL:0000187!3.35e-13!54;CL:0000192!4.25e-13!42;CL:0000514!4.25e-13!42;CL:0000071!1.67e-12!18;CL:0002546!1.67e-12!18;CL:0000393!2.32e-11!60;CL:0000211!2.32e-11!60;CL:0000359!2.33e-11!32;CL:0000003!9.10e-10!722;CL:1000449!9.14e-08!16;CL:1000413!2.89e-07!9;CL:1000497!4.65e-07!18;CL:0002518!4.65e-07!18;CL:0002681!8.77e-07!13;CL:0002584!8.77e-07!13 | |ontology_enrichment_celltype=CL:0000222!8.93e-32!119;CL:0000220!7.64e-22!246;CL:0002321!9.25e-22!248;CL:0000144!1.47e-21!625;CL:0002371!4.02e-20!591;CL:0000213!2.53e-18!57;CL:0000215!2.53e-18!57;CL:0000548!3.57e-18!679;CL:0000004!3.57e-18!679;CL:0000255!3.57e-18!679;CL:0000055!5.63e-18!180;CL:0000115!8.92e-18!35;CL:0002078!1.74e-17!44;CL:0000012!3.01e-17!682;CL:0002139!9.76e-16!24;CL:0000183!4.76e-14!59;CL:0000680!9.33e-14!57;CL:0000056!9.33e-14!57;CL:0000355!9.33e-14!57;CL:0000187!3.35e-13!54;CL:0000192!4.25e-13!42;CL:0000514!4.25e-13!42;CL:0000071!1.67e-12!18;CL:0002546!1.67e-12!18;CL:0000393!2.32e-11!60;CL:0000211!2.32e-11!60;CL:0000359!2.33e-11!32;CL:0000003!9.10e-10!722;CL:1000449!9.14e-08!16;CL:1000413!2.89e-07!9;CL:1000497!4.65e-07!18;CL:0002518!4.65e-07!18;CL:0002681!8.77e-07!13;CL:0002584!8.77e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.13e-20;24!CL:0000115;7.86e-19;36!CL:0000071;3.71e-16;18!CL:0002078;2.47e-15;45!CL:0000213;4.79e-14;58!CL:0000215;4.79e-14;58!CL:0000359;2.55e-13;32!CL:1000449;1.57e-10;15!CL:0000192;4.77e-10;43!CL:1000497;6.40e-10;17!CL:0002518;6.40e-10;17!CL:0002681;3.00e-09;12!CL:0002584;3.00e-09;12!CL:1000413;3.02e-09;9!CL:0000187;2.39e-07;55!CL:1000746;6.41e-07;7!CL:1000612;6.41e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.09e-35,121;CL:0002321,1.87e-23,250;CL:0000115,5.91e-23,36;CL:0000213,7.67e-23,58;CL:0000215,7.67e-23,58;CL:0002078,9.59e-23,45;CL:0002139,1.73e-20,24;CL:0000071,3.63e-16,18;CL:0002546,3.63e-16,18;CL:0000192,6.15e-14,43;CL:0000514,6.15e-14,43;CL:0000359,7.99e-14,32;CL:0000680,1.01e-12,58;CL:0000056,1.01e-12,58;CL:0000355,1.01e-12,58;CL:0000187,1.62e-12,55;CL:0000393,1.44e-10,61;CL:0000211,1.44e-10,61;CL:1000449,2.06e-10,15;CL:1000497,8.28e-10,17;CL:0002518,8.28e-10,17;CL:1000413,3.51e-09,9;CL:0002681,3.88e-09,12;CL:0002584,3.88e-09,12;CL:0000076,9.89e-09,63;CL:1000746,7.13e-07,7;CL:1000612,7.13e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;3.71e-16;18!CL:0000222;3.96e-10;121!CL:0000514;4.77e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.24e-27!79;UBERON:0007798!7.24e-27!79;UBERON:0000055!7.08e-23!69;UBERON:0001981!4.64e-20!60;UBERON:0007500!4.64e-20!60;UBERON:0004537!4.64e-20!60;UBERON:0006965!4.64e-20!60;UBERON:0004535!1.44e-19!110;UBERON:0004872!1.79e-19!84;UBERON:0001009!2.71e-19!113;UBERON:0003914!4.80e-19!118;UBERON:0001637!7.18e-18!42;UBERON:0003509!7.18e-18!42;UBERON:0004572!7.18e-18!42;UBERON:0004573!3.09e-15!33;UBERON:0004571!3.09e-15!33;UBERON:0001986!1.67e-12!18;UBERON:0004638!1.67e-12!18;UBERON:0004852!1.67e-12!18;UBERON:0000490!6.64e-12!138;UBERON:0006914!7.44e-12!25;UBERON:0000914!1.22e-11!83;UBERON:0002329!1.22e-11!83;UBERON:0003077!1.22e-11!83;UBERON:0003059!1.22e-11!83;UBERON:0007282!1.22e-11!83;UBERON:0009618!1.22e-11!83;UBERON:0007285!1.22e-11!83;UBERON:0001134!1.86e-11!61;UBERON:0002036!1.86e-11!61;UBERON:0003082!1.86e-11!61;UBERON:0000487!1.89e-11!22;UBERON:0005256!5.34e-11!143;UBERON:0002385!7.80e-11!63;UBERON:0001015!7.80e-11!63;UBERON:0000383!7.80e-11!63;UBERON:0000486!6.36e-10!82;UBERON:0004290!1.03e-09!70;UBERON:0000477!3.57e-09!286;UBERON:0000119!5.06e-09!312;UBERON:0000947!7.55e-09!21;UBERON:0010191!7.55e-09!21;UBERON:0000483!1.12e-08!309;UBERON:0002100!1.63e-08!216;UBERON:0004211!9.14e-08!16;UBERON:0001285!9.14e-08!16;UBERON:0007684!9.14e-08!16;UBERON:0003220!9.14e-08!16;UBERON:0004208!9.14e-08!16;UBERON:0004111!9.77e-08!241;UBERON:0003081!1.57e-07!216;UBERON:0003887!2.82e-07!21;UBERON:0003915!2.89e-07!9;UBERON:0004700!2.89e-07!9;UBERON:0001917!2.89e-07!9;UBERON:0006555!4.02e-07!17;UBERON:0005103!4.02e-07!17;UBERON:0000083!4.02e-07!17;UBERON:0009201!4.02e-07!17;UBERON:0004819!4.02e-07!17;UBERON:0006553!4.02e-07!17;UBERON:0003074!4.02e-07!17;UBERON:0003060!4.02e-07!17;UBERON:0000080!4.91e-07!18;UBERON:0002120!4.91e-07!18;UBERON:0004875!4.91e-07!18;UBERON:0005721!4.91e-07!18;UBERON:0005754!4.91e-07!18;UBERON:0007297!4.91e-07!18;UBERON:0000926!5.86e-07!448;UBERON:0004120!5.86e-07!448;UBERON:0006603!5.86e-07!448;UBERON:0004876!5.97e-07!20;UBERON:0001225!8.77e-07!13;UBERON:0008987!8.77e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.55e-17;33!UBERON:0004571;2.55e-17;33!UBERON:0001637;2.57e-17;42!UBERON:0003509;2.57e-17;42!UBERON:0004572;2.57e-17;42!UBERON:0004638;3.71e-16;18!UBERON:0001986;3.71e-16;18!UBERON:0004852;3.71e-16;18!UBERON:0003914;6.75e-16;74!UBERON:0000055;1.28e-15;65!UBERON:0007500;1.43e-15;56!UBERON:0001981;1.43e-15;56!UBERON:0004537;1.43e-15;56!UBERON:0000487;4.88e-15;22!UBERON:0002049;9.31e-15;75!UBERON:0007798;9.31e-15;75!UBERON:0006914;9.44e-15;25!UBERON:0000490;5.06e-11;33!UBERON:0000947;1.21e-10;21!UBERON:0010191;1.21e-10;21!UBERON:0006555;1.57e-10;15!UBERON:0004819;1.57e-10;15!UBERON:0001285;1.57e-10;15!UBERON:0007684;1.57e-10;15!UBERON:0000025;2.45e-10;93!UBERON:0001225;3.00e-09;12!UBERON:0008987;3.00e-09;12!UBERON:0003915;3.02e-09;9!UBERON:0004700;3.02e-09;9!UBERON:0001917;3.02e-09;9!UBERON:0000353;3.60e-09;15!UBERON:0004535;2.27e-08;109!UBERON:0001009;3.08e-08;112!UBERON:0001851;1.92e-07;15!UBERON:0004111;2.50e-07;130!UBERON:0000074;6.41e-07;7!UBERON:0001229;6.41e-07;7 | |||
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|phase1_expression=1.09007027562334,0.214100523890983,1.26858963686374,0,0.893922188854576,0.872338524100369,0,1.26343974685366,0,1.72013755551056,6.97801167972428,0,0,5.81701858912219,1.65698687863958,1.34465029290355,5.42425075221579,1.46062018077475,1.46379839637152,3.69363174230364,3.67201244239655,2.5076377718247,0.85870796139317,1.64249310087461,1.38096903554283,0.993374274723366,1.14940825229924,1.49550484495991,0,0,0.464448369948228,2.75826367343678,4.819294700452,1.10926203050036,0.309868802321207,0,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,1.2808035326455,0.47296445977717,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.659702600373432,0,0,0,0,0,0,0,0,0,0.736555271975129,0.316462387440884,1.69004229049553,1.27562579979026,1.04829322754188,0.44931452458598,0.300353785683013,0,2.28010194992999,1.9891667719909,1.46131323011707,0,0,0,0.426730222566507,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0,0,0,0.384273959177026,0.390178042679635,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,2.43806866313962,0.670700859703636,2.9408389224012,3.2529523714611,1.50401373190767,3.62116297402059,0.795285947051099,0,1.98523116044542,2.66075276955077,2.10803485663503,0.261958150995425,1.82147644146271,0,8.11368484136708,8.53235712766409,7.04677190749985,0,0,0,6.36039703573456,11.1830497363796,9.02565304179745,9.04492707078415,13.0044825225071,10.1793675517825,7.9418087283988,9.30300333009584,3.91342888955381,5.69025041699939,6.0424397566372,50.1779589774218,7.80998584154142,6.25027236587977,9.72170337458112,6.34028070816966,3.36794058939255,2.92789849256638,13.7984973719295,18.9853131913626,11.9081133554765,0,0,1.74437620857014,0,4.93858995491861,1.58891016975863,1.43418310374407,2.4826786753885,0,1.06748995729705,2.22000793575444,2.17847724779836,2.02066008104532,1.9615428373615,1.51357427644931,1.15235184896,1.40592859100278,1.87296046098192,2.85235910772225,0.298897361103602,0.23486899728753,0.647491777472526,0.561803226808994,3.26646674007829,1.47401180774122,1.34323515528495,2.37600571456411,0.494533858557114,0.910161361938026,5.74894513452991,2.02003336744879,1.00094815897571,1.93944880838928,1.31693286264251,0.612975591598039,0.150238058906597,3.28953331164061,0,0.213557388818567,0.211931901159562,0.900273288253207,0.721367704669072,0.257640540045629,1.11670113798954,0.337552664482532,0.876933046450788,0.252433774244115,0.644349290496095,0.969876340912871,0,0.604512589365842,0.847802961552438,3.09217365061275,3.27295344709002,3.72845974005705,0.609868530647977,0.397589304964456,0.813357600086629,0.414644220061482,0.756962552626885,0.72995471815166,0,0,0,0.928735856063958,1.44375896333917,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,14.0249536378683,1.40241773803446,4.9388881359768,7.3504355692771,0,0.982827216677626,0,0,0,3.08822058537346,2.52425656439839,2.24803506515239,1.10581869652794,0.833296006426766,0,6.23960871167747,1.44331342025273,0.579652024875384,0.821860859650752,4.90845922387651,4.62985512576611,6.46864117597634,4.74122638775565,1.71697232418975,0.738651018262192,1.63802985597466,2.37809859661965,5.62403003920662,1.17587489739202,3.68615252830205,1.07470227243418,1.74380363108377,3.06706143332169,0,1.05658120815871,0.207328115540772,0,0.12624243342638,0.698476837213859,0.763976851116555,2.34434894420094,5.13217338068116,0,1.8020583470635,0.285826432630578,1.12131084345361,1.30788020649984,1.466765716419,0.775630294546667,10.7296933755565,1.690605505112,1.06375246633948,0,2.05765899409714,2.83698264046557,3.46348832720929,0.428933980974443,0,0.823240336780769,0,0,0,8.44030255766841,9.58686804460323,7.19805536510811,1.2162378064119,1.50677127429638,2.10833939483032,1.19812427745791,0,0,2.75084482668401,1.64381058040307,0.895304816199478,0.784596007954691,0.197030760201927,0,0,3.04913549066956,0,0,0.502548796003046,0,0,0,0,1.34960640891054,4.00136416847742,2.17012018959788,0.831883446123229,1.60586089917446,1.41932173530541,0.468565659970853,0.902838299183157,6.82222512167955,1.03473071292505,1.99267679560631,2.21243002250044,0.695068915744663,0.391602314925481,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,1.98486246255021,0,0.561320188866147,1.92208723883551,1.53512174720011,1.28683136914886,4.45254199334973,1.54209693802656,4.26148140751505,1.8067974323038,3.63478100428535,2.20799719073923,0,4.41114234667227,0.184161977871793,0.803701137152247,0.182091168006717,1.04899531967539,2.25599806453706,2.15642943892361,1.56869953835371,4.38417673959782,3.0609972378934,15.9226737699255,9.86543490603791,4.96606607034921,15.4227252690289,4.06419656315779,3.01013864312912,2.54876273045038,3.3243040357149,4.47749509444357,0,0,0.7693503753491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| ||
|short_description=p@chr16:30440530..30440614,- | |short_description=p@chr16:30440530..30440614,- | ||
}} | }} |
Latest revision as of 08:10, 25 July 2015
Short description: | p@chr16:30440530..30440614, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30440530..30440614, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.09e-35 | 121 |
embryonic cell | 1.87e-23 | 250 |
endothelial cell | 5.91e-23 | 36 |
lining cell | 7.67e-23 | 58 |
barrier cell | 7.67e-23 | 58 |
meso-epithelial cell | 9.59e-23 | 45 |
endothelial cell of vascular tree | 1.73e-20 | 24 |
blood vessel endothelial cell | 3.63e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.63e-16 | 18 |
smooth muscle cell | 6.15e-14 | 43 |
smooth muscle myoblast | 6.15e-14 | 43 |
vascular associated smooth muscle cell | 7.99e-14 | 32 |
muscle precursor cell | 1.01e-12 | 58 |
myoblast | 1.01e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-12 | 58 |
muscle cell | 1.62e-12 | 55 |
electrically responsive cell | 1.44e-10 | 61 |
electrically active cell | 1.44e-10 | 61 |
epithelial cell of nephron | 2.06e-10 | 15 |
kidney cell | 8.28e-10 | 17 |
kidney epithelial cell | 8.28e-10 | 17 |
endothelial cell of artery | 3.51e-09 | 9 |
kidney cortical cell | 3.88e-09 | 12 |
renal cortical epithelial cell | 3.88e-09 | 12 |
squamous epithelial cell | 9.89e-09 | 63 |
glomerular cell | 7.13e-07 | 7 |
kidney corpuscule cell | 7.13e-07 | 7 |