FFCP PHASE1:Hg19::chr16:78542236..78542240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:78542236..78542240,+ | |||
|description=CAGE_peak_at_chr16:78542236..78542240,+ | |description=CAGE_peak_at_chr16:78542236..78542240,+ | ||
|id=chr16:78542236..78542240,+ | |id=chr16:78542236..78542240,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.10e-07;1!CL:0000911;3.10e-07;1!CL:0000222;3.10e-07;1!CL:0000814;3.10e-07;1 | |ontology_enrichment_celltype_v019=CL:0002127;3.10e-07;1!CL:0000911;3.10e-07;1!CL:0000222;3.10e-07;1!CL:0000814;3.10e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.85e-07,1;CL:0000914,1.85e-07,1;CL:0000911,1.85e-07,1;CL:0000814,1.85e-07,1;CL:0002042,1.85e-07,1;CL:0002039,1.85e-07,1;CL:0002040,1.85e-07,1;CL:0002041,1.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.86e-08;1 | |ontology_enrichment_development_v019=UBERON:0005425;9.86e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;3.10e-07;1!DOID:3149;3.10e-07;1 | |ontology_enrichment_disease_v019=DOID:3151;3.10e-07;1!DOID:3149;3.10e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.97e-07,1;DOID:3149,1.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-19!115;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0000073!9.25e-08!94;UBERON:0001016!9.25e-08!94;UBERON:0001017!1.33e-07!82;UBERON:0005743!3.02e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.77e-19!115;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0000073!9.25e-08!94;UBERON:0001016!9.25e-08!94;UBERON:0001017!1.33e-07!82;UBERON:0005743!3.02e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.99e-09;3!UBERON:0004054;7.99e-09;3!UBERON:0000941;9.86e-08;1!UBERON:0001785;9.86e-08;1!UBERON:0002464;9.86e-08;1!UBERON:0004904;9.86e-08;1!UBERON:0001021;9.86e-08;1!UBERON:0001000;3.10e-07;1!UBERON:0002135;3.10e-07;1!UBERON:0001301;3.10e-07;1!UBERON:0007195;3.10e-07;1!UBERON:0005352;3.10e-07;1!UBERON:0002346;4.81e-07;4!UBERON:0000923;4.81e-07;4!UBERON:0010316;4.81e-07;4!UBERON:0005291;4.81e-07;4!UBERON:0005904;8.07e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;7.99e-09;3!UBERON:0004054;7.99e-09;3!UBERON:0000941;9.86e-08;1!UBERON:0001785;9.86e-08;1!UBERON:0002464;9.86e-08;1!UBERON:0004904;9.86e-08;1!UBERON:0001021;9.86e-08;1!UBERON:0001000;3.10e-07;1!UBERON:0002135;3.10e-07;1!UBERON:0001301;3.10e-07;1!UBERON:0007195;3.10e-07;1!UBERON:0005352;3.10e-07;1!UBERON:0002346;4.81e-07;4!UBERON:0000923;4.81e-07;4!UBERON:0010316;4.81e-07;4!UBERON:0005291;4.81e-07;4!UBERON:0005904;8.07e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.86e-09,3;UBERON:0004054,6.86e-09,3;UBERON:0000941,9.91e-08,1;UBERON:0001785,9.91e-08,1;UBERON:0002464,9.91e-08,1;UBERON:0004904,9.91e-08,1;UBERON:0001021,9.91e-08,1;UBERON:0003902,9.91e-08,1;UBERON:0005425,9.91e-08,1;UBERON:0001301,1.44e-07,1;UBERON:0002135,3.02e-07,1;UBERON:0001000,5.19e-07,1;UBERON:0005352,5.19e-07,1;UBERON:0007195,5.84e-07,1;UBERON:0005904,7.20e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,1.54934401160603,0.426507697462265,0,1.10799081706375,0.200544447470142,0.651032612147555,0.447830948479849,1.29557466407592,0,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,1.70692089026603,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.80642697289893,1.06976078313403,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.68127715990291,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.366277859273374,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,1.23408681925858,0,0,0,0.213648142254946,0.962479855263359,0,0.185803175125719,0,0.569134746787313,0.478278818186467,0,0.191505370132367,0.423347165447766,0.973865820823666,0,2.73881614839831,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,0,0.422008249231538,0,0,0.211125408127993,0.796991953004279,0.552567831062295,0,0,0.123084805461069,0,0,0.716084698702437,0.511572370226872,0.0986434056369336,0,1.11136990144637,0,0.463840490809256,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0.709163045303809,1.72371686620732,0.583209226766509,0.173624994933292,0,0.120596438625408,0,0.884634079449797,0.295547618953547,0.438770794307945,0.10893846351899,0.278847488557207,0.846452843541768,0.227884111694002,0,0.359030577639089,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0.649165919226273,1.99052386215701,0.176915129006678,0,0,0.123563938946503,0.313265848516366,0.337005664903385,0.802577647298789,0,0.729819156862664,0.19566461893209,0.242780379534093,1.18375320854817,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,1.7472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0.529536760149002,0.225980740780532,0.274083849293502,0,0.316553979779393,0.391102765469606,0,0.640358984218058,0,0,0.343609788497747,0.686379991447858,0,0.248505071130865,0.235694034616795,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0.262887354279314,1.39641200636127,0.687481272035051,0,0.199679000498991,1.28767814440971,0,0.134366944973453,0,0,0,0.0824158583811665,0.26961417541674,0,0,0,0.544813624446302,0.482259445395058,0.137539436597234,0,0.2249738915515,0,0.91124334987037,1.67717343799633,0.630445658393585,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.517131825446202,0.79339561045614,0.171086837884329,0,0,0.157204305099666,0.828478110694391,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0.471162288750703,0,0.122026264901963,0.876336514945499,0.573409195690071,0.776503360757966,0.558867626472451,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,1.26184898228651,0,0,0.260994291965212,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0.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| ||
|short_description=p@chr16:78542236..78542240,+ | |short_description=p@chr16:78542236..78542240,+ | ||
}} | }} |
Latest revision as of 12:32, 25 July 2015
Short description: | p@chr16:78542236..78542240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:78542236..78542240, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.85e-07 | 1 |
immature NK T cell | 1.85e-07 | 1 |
effector T cell | 1.85e-07 | 1 |
mature NK T cell | 1.85e-07 | 1 |
immature NK T cell stage IV | 1.85e-07 | 1 |
immature NK T cell stage I | 1.85e-07 | 1 |
immature NK T cell stage II | 1.85e-07 | 1 |
immature NK T cell stage III | 1.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.86e-09 | 3 |
internal male genitalia | 6.86e-09 | 3 |
cranial nerve II | 9.91e-08 | 1 |
cranial nerve | 9.91e-08 | 1 |
nerve trunk | 9.91e-08 | 1 |
nerve connecting eye with brain | 9.91e-08 | 1 |
nerve | 9.91e-08 | 1 |
retinal neural layer | 9.91e-08 | 1 |
presumptive neural retina | 9.91e-08 | 1 |
epididymis | 1.44e-07 | 1 |
mitral valve | 3.02e-07 | 1 |
vas deferens | 5.19e-07 | 1 |
spermatic cord | 5.19e-07 | 1 |
stroma of bone marrow | 5.84e-07 | 1 |
duct of male reproductive system | 7.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.97e-07 | 1 |
keratoacanthoma | 1.97e-07 | 1 |