FFCP PHASE1:Hg19::chr16:86469492..86469500,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86469492..86469500,- | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr16:86469492..86469500,- | |description=CAGE_peak_at_chr16:86469492..86469500,- | ||
|id=chr16:86469492..86469500,- | |id=chr16:86469492..86469500,- | ||
|ontology_enrichment_celltype=CL:0002057!5.31e-37!42;CL:0000860!1.78e-33!45;CL:0000839!3.64e-33!70;CL:0000557!9.30e-33!71;CL:0000766!1.92e-29!76;CL:0002009!8.25e-29!65;CL:0002194!4.25e-27!63;CL:0000576!4.25e-27!63;CL:0000040!4.25e-27!63;CL:0000559!4.25e-27!63;CL:0000763!2.16e-25!112;CL:0000049!2.16e-25!112;CL:0002031!4.67e-22!124;CL:0000738!5.01e-19!140;CL:0002032!1.69e-18!165;CL:0000837!1.69e-18!165;CL:0000037!1.50e-17!172;CL:0000566!1.50e-17!172;CL:0000988!2.55e-15!182;CL:0002087!3.59e-15!119;CL:0000134!1.70e-08!358;CL:0000048!4.28e-08!430;CL:0002320!7.76e-08!365;CL:0000034!9.89e-08!444;CL:0000723!1.40e-07!436;CL:0000219!3.22e-07!390 | |ontology_enrichment_celltype=CL:0002057!5.31e-37!42;CL:0000860!1.78e-33!45;CL:0000839!3.64e-33!70;CL:0000557!9.30e-33!71;CL:0000766!1.92e-29!76;CL:0002009!8.25e-29!65;CL:0002194!4.25e-27!63;CL:0000576!4.25e-27!63;CL:0000040!4.25e-27!63;CL:0000559!4.25e-27!63;CL:0000763!2.16e-25!112;CL:0000049!2.16e-25!112;CL:0002031!4.67e-22!124;CL:0000738!5.01e-19!140;CL:0002032!1.69e-18!165;CL:0000837!1.69e-18!165;CL:0000037!1.50e-17!172;CL:0000566!1.50e-17!172;CL:0000988!2.55e-15!182;CL:0002087!3.59e-15!119;CL:0000134!1.70e-08!358;CL:0000048!4.28e-08!430;CL:0002320!7.76e-08!365;CL:0000034!9.89e-08!444;CL:0000723!1.40e-07!436;CL:0000219!3.22e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.88e-58;33!CL:0002057;3.88e-58;33!CL:0000473;1.21e-46;39!CL:0000234;1.21e-46;39!CL:0000576;1.94e-37;48!CL:0000766;2.75e-29;69!CL:0000763;7.25e-17;100!CL:0002087;2.19e-10;104!CL:0000097;1.12e-09;5!CL:0000738;4.65e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.85e-71,42;CL:0002057,5.85e-71,42;CL:0000473,1.94e-69,48;CL:0000234,1.94e-69,48;CL:0000557,1.48e-61,67;CL:0000766,1.14e-59,72;CL:0000839,1.92e-59,66;CL:0002009,1.32e-54,61;CL:0002194,1.43e-53,59;CL:0000576,1.43e-53,59;CL:0000040,1.43e-53,59;CL:0000559,1.43e-53,59;CL:0000763,1.47e-42,108;CL:0000049,1.47e-42,108;CL:0002031,1.55e-33,120;CL:0000738,1.36e-31,136;CL:0002032,7.64e-28,161;CL:0000837,7.64e-28,161;CL:0002087,2.44e-26,115;CL:0000037,3.36e-26,168;CL:0000988,2.80e-24,177;CL:0000097,1.24e-09,5;CL:0002028,1.24e-09,5;CL:0000034,3.18e-09,441;CL:0000134,6.32e-09,354;CL:0002393,7.50e-09,9;CL:0002397,7.50e-09,9;CL:0000048,1.06e-08,427;CL:0002320,1.57e-08,361;CL:0000723,2.10e-08,433;CL:0000219,1.04e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-49;42!CL:0000049;1.95e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-29!80;UBERON:0001474!2.87e-28!86;UBERON:0004765!1.68e-24!101;UBERON:0001434!1.68e-24!101;UBERON:0002390!1.22e-22!102;UBERON:0003061!1.22e-22!102;UBERON:0002193!8.07e-20!112;UBERON:0002405!1.50e-19!115;UBERON:0002204!2.73e-16!167;UBERON:0003081!1.01e-10!216;UBERON:0002384!1.43e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.18e-56,76;UBERON:0001474,3.70e-51,82;UBERON:0004765,9.30e-51,90;UBERON:0001434,1.36e-44,100;UBERON:0002405,7.16e-44,93;UBERON:0002390,4.26e-41,98;UBERON:0003061,4.26e-41,98;UBERON:0002193,2.58e-36,108;UBERON:0002204,6.82e-31,167;UBERON:0003081,1.27e-18,203;UBERON:0000926,4.90e-10,315;UBERON:0004120,4.90e-10,315;UBERON:0006603,4.90e-10,315;UBERON:0002384,5.40e-08,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,2.41077811209591,1.46062018077475,1.46379839637152,0,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,1.18009283054671,0,1.85779347979291,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0,0,0.32389366601898,0,1.59938062657521,1.88937971844405,1.69808842831471,2.55671940596253,0,1.85823822537062,2.58923153089935,1.7931249457037,2.60130452877444,2.06847408441971,0.645484683583826,2.70852973188684,2.25890807451126,1.91034305040492,3.59557575112135,3.67300670845083,1.60464513538047,3.19668562899521,1.31940520074686,0.797854630486527,2.13112375266347,3.77272010217159,1.70215567407342,3.11411124497787,0.502497330513487,0,1.3031330682307,1.81619850790011,2.57794345191295,2.21523671208619,2.74631872205524,3.4016687994407,3.56419697364239,1.46027220490444,2.25265339262259,1.92870704036496,0.570025487482497,2.18808344918999,2.73996230646951,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,1.58030450865046,0,0,0,3.17654341242288,0,0,0,1.33692548262208,1.47302953737419,1.10766947291811,0.812411591295047,1.79327847615945,0.910415432919148,2.13769275984779,3.03985019564433,1.15921234294021,0,0,1.04535523804977,1.92625882585863,0,0,0.759059076058509,0,0,0,0.602300476311091,0,2.49861453104692,0.236777252044017,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,1.7662459561294,0,0,0,0,0,0.721879481669586,0.118306800039844,0.505754070234305,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,1.34385702559088,1.98485136139341,0.0895585227028483,0.290633938513962,0,0.492663237895943,1.58487181223807,2.28060927094849,1.72943944100354,2.01987893482208,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,3.01354254859276,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0,0.143411352204052,0.88424136911809,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,1.86220955581764,0,0,0.425846237690326,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0,1.349843349309,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,1.77962244319307,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,1.04349012362347,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0.686791410365586,2.02049693259551,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,1.24082554265728,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,2.41077811209591,1.46062018077475,1.46379839637152,0,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,1.18009283054671,0,1.85779347979291,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0,0,0.32389366601898,0,1.59938062657521,1.88937971844405,1.69808842831471,2.55671940596253,0,1.85823822537062,2.58923153089935,1.7931249457037,2.60130452877444,2.06847408441971,0.645484683583826,2.70852973188684,2.25890807451126,1.91034305040492,3.59557575112135,3.67300670845083,1.60464513538047,3.19668562899521,1.31940520074686,0.797854630486527,2.13112375266347,3.77272010217159,1.70215567407342,3.11411124497787,0.502497330513487,0,1.3031330682307,1.81619850790011,2.57794345191295,2.21523671208619,2.74631872205524,3.4016687994407,3.56419697364239,1.46027220490444,2.25265339262259,1.92870704036496,0.570025487482497,2.18808344918999,2.73996230646951,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,1.58030450865046,0,0,0,3.17654341242288,0,0,0,1.33692548262208,1.47302953737419,1.10766947291811,0.812411591295047,1.79327847615945,0.910415432919148,2.13769275984779,3.03985019564433,1.15921234294021,0,0,1.04535523804977,1.92625882585863,0,0,0.759059076058509,0,0,0,0.602300476311091,0,2.49861453104692,0.236777252044017,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,1.7662459561294,0,0,0,0,0,0.721879481669586,0.118306800039844,0.505754070234305,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,1.34385702559088,1.98485136139341,0.0895585227028483,0.290633938513962,0,0.492663237895943,1.58487181223807,2.28060927094849,1.72943944100354,2.01987893482208,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,3.01354254859276,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.61384789315225,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0,0.143411352204052,0.88424136911809,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,1.86220955581764,0,0,0.425846237690326,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0,1.349843349309,0.77380195455795,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,1.77962244319307,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,1.04349012362347,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0.686791410365586,2.02049693259551,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,0,1.24082554265728,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:86469492..86469500,- | |short_description=p@chr16:86469492..86469500,- | ||
}} | }} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:86469492..86469500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86469492..86469500, - |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.18e-56 | 76 |
bone element | 3.70e-51 | 82 |
skeletal element | 9.30e-51 | 90 |
skeletal system | 1.36e-44 | 100 |
immune system | 7.16e-44 | 93 |
hematopoietic system | 4.26e-41 | 98 |
blood island | 4.26e-41 | 98 |
hemolymphoid system | 2.58e-36 | 108 |
musculoskeletal system | 6.82e-31 | 167 |
lateral plate mesoderm | 1.27e-18 | 203 |
mesoderm | 4.90e-10 | 315 |
mesoderm-derived structure | 4.90e-10 | 315 |
presumptive mesoderm | 4.90e-10 | 315 |
connective tissue | 5.40e-08 | 371 |